RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 POGZQ7Z3K3 1410 aa30.44■■■□□ 2.46
SPHK1-202ENST00000392496 KIDINS220Q9ULH0 1771 aa30.43■■■□□ 2.46
SPHK1-202ENST00000392496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.42■■■□□ 2.468e-8■■■□□ 17.9
SPHK1-202ENST00000392496 DEPDC5O75140 1603 aa30.42■■■□□ 2.46
SPHK1-202ENST00000392496 EIF2AK4Q9P2K8 1649 aaKnown RBP30.42■■■□□ 2.46
SPHK1-202ENST00000392496 DHX29Q7Z478 1369 aaKnown RBP30.39■■■□□ 2.46
SPHK1-202ENST00000392496 MLH3Q9UHC1 1453 aa30.38■■■□□ 2.45
SPHK1-202ENST00000392496 MYT1LQ9UL68 1186 aa30.36■■■□□ 2.45
SPHK1-202ENST00000392496 HECW2Q9P2P5 1572 aa30.34■■■□□ 2.45
SPHK1-202ENST00000392496 PPRC1Q5VV67 1664 aaKnown RBP30.34■■■□□ 2.45
SPHK1-202ENST00000392496 ATP10AO60312 1499 aa30.32■■■□□ 2.44
SPHK1-202ENST00000392496 VWDEQ8N2E2 1590 aa30.3■■■□□ 2.44
SPHK1-202ENST00000392496 PLA2R1Q13018 1463 aa30.29■■■□□ 2.44
SPHK1-202ENST00000392496 NBPF8Q3BBV2 869 aa30.28■■■□□ 2.44
SPHK1-202ENST00000392496 CCDC144AA2RUR9 1427 aa30.28■■■□□ 2.44
SPHK1-202ENST00000392496 A2MP01023 1474 aa30.28■■■□□ 2.44
SPHK1-202ENST00000392496 PRDM15P57071 1507 aaPredicted RBP30.27■■■□□ 2.44
SPHK1-202ENST00000392496 KANK1Q14678 1352 aa30.27■■■□□ 2.44
SPHK1-202ENST00000392496 TET3O43151 1660 aa30.25■■■□□ 2.43
SPHK1-202ENST00000392496 KIF3BO15066 747 aa30.25■■■□□ 2.43
SPHK1-202ENST00000392496 RICTORQ6R327 1708 aa30.25■■■□□ 2.43
SPHK1-202ENST00000392496 MROH1Q8NDA8 1641 aa30.24■■■□□ 2.43
SPHK1-202ENST00000392496 E9PCH4 1651 aa30.24■■■□□ 2.43
SPHK1-202ENST00000392496 MIER1Q8N108 512 aa30.23■■■□□ 2.43
SPHK1-202ENST00000392496 UHRF1BP1Q6BDS2 1440 aa30.23■■■□□ 2.43
SPHK1-202ENST00000392496 ABCA6Q8N139 1617 aa30.21■■■□□ 2.43
SPHK1-202ENST00000392496 RNF17Q9BXT8 1623 aaKnown RBP30.21■■■□□ 2.43
SPHK1-202ENST00000392496 BCORL1Q5H9F3 1711 aa30.2■■■□□ 2.42
SPHK1-202ENST00000392496 EIF4G2P78344 907 aaKnown RBP eCLIP30.2■■■□□ 2.42
SPHK1-202ENST00000392496 HIRIP3Q9BW71 556 aaPredicted RBP30.2■■■□□ 2.42
SPHK1-202ENST00000392496 FRMPD1Q5SYB0 1578 aa30.2■■■□□ 2.42
SPHK1-202ENST00000392496 RAPGEF3O95398 923 aa30.18■■■□□ 2.42
SPHK1-202ENST00000392496 HSPA5P11021 654 aaKnown RBP30.17■■■□□ 2.42
SPHK1-202ENST00000392496 PTPRTO14522 1441 aa30.14■■■□□ 2.42
SPHK1-202ENST00000392496 TRPM2O94759 1503 aa30.14■■■□□ 2.41
SPHK1-202ENST00000392496 LMTK2Q8IWU2 1503 aa30.14■■■□□ 2.41
SPHK1-202ENST00000392496 SPHKAPQ2M3C7 1700 aa30.14■■■□□ 2.41
SPHK1-202ENST00000392496 DIP2CQ9Y2E4 1556 aa30.13■■■□□ 2.41
SPHK1-202ENST00000392496 RALGAPBQ86X10 1494 aa30.1■■■□□ 2.41
SPHK1-202ENST00000392496 ZMYM4Q5VZL5 1548 aa30.09■■■□□ 2.41
SPHK1-202ENST00000392496 DDX10Q13206 875 aaKnown RBP30.08■■■□□ 2.41
SPHK1-202ENST00000392496 EFCAB6Q5THR3 1501 aa30.08■■■□□ 2.41
SPHK1-202ENST00000392496 DCAF11Q8TEB1 546 aa30.08■■■□□ 2.41
SPHK1-202ENST00000392496 SPATA31E1Q6ZUB1 1445 aa30.07■■■□□ 2.4
SPHK1-202ENST00000392496 ZNF326Q5BKZ1 582 aaKnown RBP30.05■■■□□ 2.4
SPHK1-202ENST00000392496 CEP152O94986 1710 aa30.04■■■□□ 2.4
SPHK1-202ENST00000392496 COL17A1Q9UMD9 1497 aaPredicted RBP30.03■■■□□ 2.4
SPHK1-202ENST00000392496 KDM2AQ9Y2K7 1162 aa30.02■■■□□ 2.4
SPHK1-202ENST00000392496 CLTCL1P53675 1640 aa30.01■■■□□ 2.39
SPHK1-202ENST00000392496 PRAG1Q86YV5 1406 aa30■■■□□ 2.39
SPHK1-202ENST00000392496 YEATS2Q9ULM3 1422 aa29.99■■■□□ 2.39
SPHK1-202ENST00000392496 RGL3Q3MIN7 710 aa29.99■■■□□ 2.39
SPHK1-202ENST00000392496 NEURL4Q96JN8 1562 aa29.98■■■□□ 2.39
SPHK1-202ENST00000392496 TRPM1Q7Z4N2 1603 aa29.96■■■□□ 2.39
SPHK1-202ENST00000392496 USP47Q96K76 1375 aa29.95■■■□□ 2.39
SPHK1-202ENST00000392496 WASHC2AQ641Q2 1341 aa29.95■■■□□ 2.39
SPHK1-202ENST00000392496 ABCC3O15438 1527 aa29.95■■■□□ 2.38
SPHK1-202ENST00000392496 POLR1AO95602 1720 aaPredicted RBP29.95■■■□□ 2.38
SPHK1-202ENST00000392496 GGT6Q6P531 493 aa29.95■■■□□ 2.38
SPHK1-202ENST00000392496 STAC3Q96MF2 364 aa29.9■■■□□ 2.38
SPHK1-202ENST00000392496 CARD11Q9BXL7 1154 aa29.9■■■□□ 2.38
SPHK1-202ENST00000392496 REREQ9P2R6 1566 aa29.9■■■□□ 2.38
SPHK1-202ENST00000392496 ZC3H13Q5T200 1668 aaKnown RBP29.9■■■□□ 2.38
SPHK1-202ENST00000392496 CCDC7Q96M83 1385 aa29.89■■■□□ 2.37
SPHK1-202ENST00000392496 CAMSAP1Q5T5Y3 1602 aa29.88■■■□□ 2.37
SPHK1-202ENST00000392496 WASHC2CQ9Y4E1 1318 aa29.88■■■□□ 2.37
SPHK1-202ENST00000392496 NPATQ14207 1427 aa29.88■■■□□ 2.37
SPHK1-202ENST00000392496 ROCK2O75116 1388 aaKnown RBP29.87■■■□□ 2.37
SPHK1-202ENST00000392496 LAMC1P11047 1609 aa29.87■■■□□ 2.37
SPHK1-202ENST00000392496 GPRASP1Q5JY77 1395 aa29.86■■■□□ 2.37
SPHK1-202ENST00000392496 KIF1BO60333 1816 aa29.86■■■□□ 2.37
SPHK1-202ENST00000392496 C11orf95C9JLR9 678 aaPredicted RBP29.85■■■□□ 2.37
SPHK1-202ENST00000392496 CNTLNQ9NXG0 1405 aa29.83■■■□□ 2.37
SPHK1-202ENST00000392496 UGGT1Q9NYU2 1555 aa29.82■■■□□ 2.36
SPHK1-202ENST00000392496 ARHGAP31Q2M1Z3 1444 aa29.81■■■□□ 2.36
SPHK1-202ENST00000392496 MADDQ8WXG6 1647 aa29.81■■■□□ 2.36
SPHK1-202ENST00000392496 AGLP35573 1532 aa29.81■■■□□ 2.36
SPHK1-202ENST00000392496 ARHGEF40Q8TER5 1519 aa29.79■■■□□ 2.36
SPHK1-202ENST00000392496 KIF7Q2M1P5 1343 aa29.79■■■□□ 2.36
SPHK1-202ENST00000392496 ARID4BQ4LE39 1312 aaPredicted RBP29.78■■■□□ 2.36
SPHK1-202ENST00000392496 ANP32CO43423 234 aa29.78■■■□□ 2.36
SPHK1-202ENST00000392496 NOS1P29475 1434 aa29.77■■■□□ 2.36
SPHK1-202ENST00000392496 CENPBP07199 599 aaPredicted RBP29.77■■■□□ 2.36
SPHK1-202ENST00000392496 ADGRB3O60242 1522 aa29.75■■■□□ 2.35
SPHK1-202ENST00000392496 NBPF1Q3BBV0 1214 aa29.74■■■□□ 2.35
SPHK1-202ENST00000392496 SIGLEC1Q9BZZ2 1709 aa29.74■■■□□ 2.35
SPHK1-202ENST00000392496 CFAP65Q6ZU64 1925 aaKnown RBP29.74■■■□□ 2.35
SPHK1-202ENST00000392496 MROH2AA6NES4 1674 aa29.73■■■□□ 2.35
SPHK1-202ENST00000392496 IFT172Q9UG01 1749 aa29.73■■■□□ 2.35
SPHK1-202ENST00000392496 MYOM2P54296 1465 aa29.73■■■□□ 2.35
SPHK1-202ENST00000392496 PPP6R1Q9UPN7 881 aa29.71■■■□□ 2.35
SPHK1-202ENST00000392496 ST20-MTHFSA0A0A6YYL1 179 aa29.7■■■□□ 2.35
SPHK1-202ENST00000392496 PIK3C2BO00750 1634 aa29.7■■■□□ 2.34
SPHK1-202ENST00000392496 YTHDC1Q96MU7 727 aaKnown RBP29.69■■■□□ 2.34
SPHK1-202ENST00000392496 KIAA1210Q9ULL0 1709 aa29.69■■■□□ 2.34
SPHK1-202ENST00000392496 CCER2I3L3R5 266 aa29.69■■■□□ 2.34
SPHK1-202ENST00000392496 SYNMO15061 1565 aa29.67■■■□□ 2.34
SPHK1-202ENST00000392496 PREX1Q8TCU6 1659 aa29.62■■■□□ 2.33
SPHK1-202ENST00000392496 NRXN1Q9ULB1 1477 aa29.62■■■□□ 2.33
SPHK1-202ENST00000392496 IQGAP1P46940 1657 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms