RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 USP35Q9P2H5 1018 aa4.67□□□□□ -1.66
TRAV39-201ENST00000390466 SHROOM2Q13796 1616 aa4.67□□□□□ -1.66
TRAV39-201ENST00000390466 RAPGEF6Q8TEU7 1601 aa4.67□□□□□ -1.66
TRAV39-201ENST00000390466 MRC2Q9UBG0 1479 aa4.67□□□□□ -1.66
TRAV39-201ENST00000390466 IQGAP1P46940 1657 aa4.67□□□□□ -1.66
TRAV39-201ENST00000390466 PRDM15P57071 1507 aaPredicted RBP4.67□□□□□ -1.66
TRAV39-201ENST00000390466 BRD4O60885 1362 aaPredicted RBP4.66□□□□□ -1.66
TRAV39-201ENST00000390466 PARD3Q8TEW0 1356 aa4.66□□□□□ -1.66
TRAV39-201ENST00000390466 USP47Q96K76 1375 aa4.66□□□□□ -1.66
TRAV39-201ENST00000390466 PTPRGP23470 1445 aa4.66□□□□□ -1.66
TRAV39-201ENST00000390466 KIAA1107Q9UPP5 1409 aa4.66□□□□□ -1.66
TRAV39-201ENST00000390466 MS4A1P11836 297 aa4.66□□□□□ -1.66
TRAV39-201ENST00000390466 RRP1P56182 461 aaKnown RBP4.66□□□□□ -1.66
TRAV39-201ENST00000390466 OSCARQ8IYS5 282 aa4.66□□□□□ -1.66
TRAV39-201ENST00000390466 FAM9BQ8IZU0 186 aa4.66□□□□□ -1.66
TRAV39-201ENST00000390466 MPHOSPH9Q99550 1183 aa4.66□□□□□ -1.66
TRAV39-201ENST00000390466 PLEKHH2Q8IVE3 1493 aa4.66□□□□□ -1.66
TRAV39-201ENST00000390466 ARID4BQ4LE39 1312 aaPredicted RBP4.66□□□□□ -1.66
TRAV39-201ENST00000390466 UNC13BO14795 1591 aa4.65□□□□□ -1.66
TRAV39-201ENST00000390466 NUP153P49790 1475 aaKnown RBP4.65□□□□□ -1.66
TRAV39-201ENST00000390466 CAMSAP2Q08AD1 1489 aa4.65□□□□□ -1.66
TRAV39-201ENST00000390466 COL17A1Q9UMD9 1497 aaPredicted RBP4.65□□□□□ -1.66
TRAV39-201ENST00000390466 SHANK2Q9UPX8 1470 aa4.65□□□□□ -1.66
TRAV39-201ENST00000390466 TCERG1O14776 1098 aaKnown RBP4.65□□□□□ -1.67
TRAV39-201ENST00000390466 P3H3Q8IVL6 736 aa4.65□□□□□ -1.67
TRAV39-201ENST00000390466 ZBTB47Q9UFB7 747 aaPredicted RBP4.65□□□□□ -1.67
TRAV39-201ENST00000390466 ABCC2Q92887 1545 aa4.65□□□□□ -1.67
TRAV39-201ENST00000390466 KDM2BQ8NHM5 1336 aa4.65□□□□□ -1.67
TRAV39-201ENST00000390466 PLXNC1O60486 1568 aa4.65□□□□□ -1.67
TRAV39-201ENST00000390466 ROCK2O75116 1388 aaKnown RBP4.65□□□□□ -1.67
TRAV39-201ENST00000390466 KTN1Q86UP2 1357 aaKnown RBP4.65□□□□□ -1.67
TRAV39-201ENST00000390466 DISP1Q96F81 1524 aa4.64□□□□□ -1.67
TRAV39-201ENST00000390466 PDE4AP27815 886 aa4.64□□□□□ -1.67
TRAV39-201ENST00000390466 RTL5Q5HYW3 569 aaPredicted RBP4.64□□□□□ -1.67
TRAV39-201ENST00000390466 RRP7BPQ9NSQ0 103 aa4.64□□□□□ -1.67
TRAV39-201ENST00000390466 BRPF3Q9ULD4 1205 aa4.64□□□□□ -1.67
TRAV39-201ENST00000390466 CEP152O94986 1710 aa4.63□□□□□ -1.67
TRAV39-201ENST00000390466 ARHGEF5Q12774 1597 aa4.63□□□□□ -1.67
TRAV39-201ENST00000390466 EXOC6Q8TAG9 804 aa4.63□□□□□ -1.67
TRAV39-201ENST00000390466 RTN4Q9NQC3 1192 aaKnown RBP4.63□□□□□ -1.67
TRAV39-201ENST00000390466 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.63□□□□□ -1.67
TRAV39-201ENST00000390466 LAS1LQ9Y4W2 734 aaKnown RBP4.63□□□□□ -1.67
TRAV39-201ENST00000390466 GPRASP1Q5JY77 1395 aa4.63□□□□□ -1.67
TRAV39-201ENST00000390466 KIF15Q9NS87 1388 aa4.63□□□□□ -1.67
TRAV39-201ENST00000390466 ABCA8O94911 1581 aa4.62□□□□□ -1.67
TRAV39-201ENST00000390466 SHPRHQ149N8 1683 aa4.62□□□□□ -1.67
TRAV39-201ENST00000390466 PPM1GO15355 546 aaPredicted RBP4.62□□□□□ -1.67
TRAV39-201ENST00000390466 NEFMP07197 916 aa4.62□□□□□ -1.67
TRAV39-201ENST00000390466 LHX8Q68G74 356 aa4.62□□□□□ -1.67
TRAV39-201ENST00000390466 U3KPZ7 1027 aaPredicted RBP4.62□□□□□ -1.67
TRAV39-201ENST00000390466 SPHKAPQ2M3C7 1700 aa4.62□□□□□ -1.67
TRAV39-201ENST00000390466 CDC42BPBQ9Y5S2 1711 aa4.62□□□□□ -1.67
TRAV39-201ENST00000390466 GPATCH8Q9UKJ3 1502 aaKnown RBP4.62□□□□□ -1.67
TRAV39-201ENST00000390466 IQGAP3Q86VI3 1631 aa4.61□□□□□ -1.67
TRAV39-201ENST00000390466 EIF2AK4Q9P2K8 1649 aaKnown RBP4.61□□□□□ -1.67
TRAV39-201ENST00000390466 NFKBIBQ15653 356 aa4.61□□□□□ -1.67
TRAV39-201ENST00000390466 DCAF11Q8TEB1 546 aa4.61□□□□□ -1.67
TRAV39-201ENST00000390466 USP19O94966 1318 aa4.61□□□□□ -1.67
TRAV39-201ENST00000390466 MYBBP1AQ9BQG0 1328 aaKnown RBP4.61□□□□□ -1.67
TRAV39-201ENST00000390466 RTEL1-TNFRSF6BF6WH68 1400 aa4.61□□□□□ -1.67
TRAV39-201ENST00000390466 SYNJ2O15056 1496 aa4.61□□□□□ -1.67
TRAV39-201ENST00000390466 MAST1Q9Y2H9 1570 aa4.61□□□□□ -1.67
TRAV39-201ENST00000390466 MADDQ8WXG6 1647 aa4.61□□□□□ -1.67
TRAV39-201ENST00000390466 GSE1Q14687 1217 aa4.6□□□□□ -1.67
TRAV39-201ENST00000390466 C8orf34Q49A92 452 aa4.6□□□□□ -1.67
TRAV39-201ENST00000390466 SKAP1Q86WV1 359 aa4.6□□□□□ -1.67
TRAV39-201ENST00000390466 FRAT1Q92837 279 aaPredicted RBP4.6□□□□□ -1.67
TRAV39-201ENST00000390466 RCAN3Q9UKA8 241 aa4.6□□□□□ -1.67
TRAV39-201ENST00000390466 TROQ12816 1431 aaPredicted RBP4.6□□□□□ -1.67
TRAV39-201ENST00000390466 PRAG1Q86YV5 1406 aa4.6□□□□□ -1.67
TRAV39-201ENST00000390466 SYNMO15061 1565 aa4.6□□□□□ -1.67
TRAV39-201ENST00000390466 PREX2Q70Z35 1606 aa4.6□□□□□ -1.67
TRAV39-201ENST00000390466 KIAA1210Q9ULL0 1709 aa4.6□□□□□ -1.67
TRAV39-201ENST00000390466 A2MP01023 1474 aa4.59□□□□□ -1.67
TRAV39-201ENST00000390466 PDE3BQ13370 1112 aa4.59□□□□□ -1.67
TRAV39-201ENST00000390466 ZC3H13Q5T200 1668 aaKnown RBP4.59□□□□□ -1.67
TRAV39-201ENST00000390466 MAGI2Q86UL8 1455 aa4.59□□□□□ -1.67
TRAV39-201ENST00000390466 FAM43AQ8N2R8 423 aa4.59□□□□□ -1.67
TRAV39-201ENST00000390466 ZNF521Q96K83 1311 aa4.59□□□□□ -1.67
TRAV39-201ENST00000390466 SPINK5Q9NQ38 1064 aaPredicted RBP4.59□□□□□ -1.67
TRAV39-201ENST00000390466 FAM135AQ9P2D6 1515 aa4.59□□□□□ -1.67
TRAV39-201ENST00000390466 IFT172Q9UG01 1749 aa4.59□□□□□ -1.67
TRAV39-201ENST00000390466 CHIC2Q9UKJ5 165 aa4.59□□□□□ -1.67
TRAV39-201ENST00000390466 SAMD9LQ8IVG5 1584 aa4.58□□□□□ -1.68
TRAV39-201ENST00000390466 PLA2R1Q13018 1463 aa4.58□□□□□ -1.68
TRAV39-201ENST00000390466 WDR7Q9Y4E6 1490 aa4.58□□□□□ -1.68
TRAV39-201ENST00000390466 CCDC144AA2RUR9 1427 aa4.58□□□□□ -1.68
TRAV39-201ENST00000390466 PLEKHH1Q9ULM0 1364 aa4.58□□□□□ -1.68
TRAV39-201ENST00000390466 PER1O15534 1290 aaPredicted RBP4.58□□□□□ -1.68
TRAV39-201ENST00000390466 TRHP20396 242 aaPredicted RBP4.58□□□□□ -1.68
TRAV39-201ENST00000390466 CYB5RLQ6IPT4 315 aa4.58□□□□□ -1.68
TRAV39-201ENST00000390466 CRBNQ96SW2 442 aa4.58□□□□□ -1.68
TRAV39-201ENST00000390466 CCDC141Q6ZP82 1450 aa4.57□□□□□ -1.68
TRAV39-201ENST00000390466 EIF3AQ14152 1382 aaKnown RBP4.57□□□□□ -1.68
TRAV39-201ENST00000390466 TDRD9Q8NDG6 1382 aaKnown RBP4.57□□□□□ -1.68
TRAV39-201ENST00000390466 ZNF644Q9H582 1327 aaPredicted RBP4.57□□□□□ -1.68
TRAV39-201ENST00000390466 KCNA4P22459 653 aa4.57□□□□□ -1.68
TRAV39-201ENST00000390466 RALBP1Q15311 655 aa4.57□□□□□ -1.68
TRAV39-201ENST00000390466 NPM2Q86SE8 214 aaKnown RBP4.57□□□□□ -1.68
TRAV39-201ENST00000390466 CDCA7LQ96GN5 454 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms