RNA–Protein interactions for RNA: ENST00000389463.8

LAMA4-205, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-205ENST00000389463 ATF3P18847 181 aa13.93□□□□□ -0.18
LAMA4-205ENST00000389463 KIAA1211Q6ZU35 1233 aa13.92□□□□□ -0.18
LAMA4-205ENST00000389463 SYNJ2O15056 1496 aa13.92□□□□□ -0.18
LAMA4-205ENST00000389463 CGNL1Q0VF96 1302 aa13.91□□□□□ -0.18
LAMA4-205ENST00000389463 CUX1P39880 1505 aa13.91□□□□□ -0.18
LAMA4-205ENST00000389463 ARHGAP5Q13017 1502 aa13.91□□□□□ -0.18
LAMA4-205ENST00000389463 ST20-MTHFSA0A0A6YYL1 179 aa13.91□□□□□ -0.18
LAMA4-205ENST00000389463 SMC4Q9NTJ3 1288 aa13.91□□□□□ -0.18
LAMA4-205ENST00000389463 CCDC146Q8IYE0 955 aa13.91□□□□□ -0.18
LAMA4-205ENST00000389463 KIF15Q9NS87 1388 aa13.9□□□□□ -0.18
LAMA4-205ENST00000389463 NLRP13Q86W25 1043 aa13.9□□□□□ -0.18
LAMA4-205ENST00000389463 CFTRP13569 1480 aa13.9□□□□□ -0.18
LAMA4-205ENST00000389463 SLC4A10Q6U841 1118 aa13.89□□□□□ -0.19
LAMA4-205ENST00000389463 GPATCH3Q96I76 525 aa13.89□□□□□ -0.19
LAMA4-205ENST00000389463 TRIM44Q96DX7 344 aaPredicted RBP13.89□□□□□ -0.19
LAMA4-205ENST00000389463 PANK3Q9H999 370 aa13.89□□□□□ -0.19
LAMA4-205ENST00000389463 MSH5O43196 834 aa13.88□□□□□ -0.19
LAMA4-205ENST00000389463 RWDD1Q9H446 243 aaPredicted RBP13.88□□□□□ -0.19
LAMA4-205ENST00000389463 PTMAP06454 111 aaKnown RBP13.88□□□□□ -0.19
LAMA4-205ENST00000389463 B4GALNT3Q6L9W6 998 aa13.88□□□□□ -0.19
LAMA4-205ENST00000389463 RCAN3Q9UKA8 241 aa13.88□□□□□ -0.19
LAMA4-205ENST00000389463 PHLDB1Q86UU1 1377 aa13.88□□□□□ -0.19
LAMA4-205ENST00000389463 HMMRO75330 724 aa13.88□□□□□ -0.19
LAMA4-205ENST00000389463 HSCBQ8IWL3 235 aa13.88□□□□□ -0.19
LAMA4-205ENST00000389463 GOLGA6L4A6NEF3 574 aa13.87□□□□□ -0.19
LAMA4-205ENST00000389463 ZNF644Q9H582 1327 aaPredicted RBP13.87□□□□□ -0.19
LAMA4-205ENST00000389463 GNL2Q13823 731 aaKnown RBP13.86□□□□□ -0.19
LAMA4-205ENST00000389463 DHX57Q6P158 1386 aaKnown RBP13.86□□□□□ -0.19
LAMA4-205ENST00000389463 TEFQ10587 303 aa13.86□□□□□ -0.19
LAMA4-205ENST00000389463 TTC5Q8N0Z6 440 aa13.85□□□□□ -0.19
LAMA4-205ENST00000389463 NAP1L5Q96NT1 182 aaPredicted RBP13.85□□□□□ -0.19
LAMA4-205ENST00000389463 FRAT2O75474 233 aaPredicted RBP13.85□□□□□ -0.19
LAMA4-205ENST00000389463 HMGXB3Q12766 1538 aa13.84□□□□□ -0.19
LAMA4-205ENST00000389463 AFAP1Q8N556 730 aa13.84□□□□□ -0.19
LAMA4-205ENST00000389463 FGD6Q6ZV73 1430 aa13.83□□□□□ -0.19
LAMA4-205ENST00000389463 SNAPC4Q5SXM2 1469 aa13.83□□□□□ -0.19
LAMA4-205ENST00000389463 STAC3Q96MF2 364 aa13.83□□□□□ -0.2
LAMA4-205ENST00000389463 CLSTN1O94985 981 aa13.83□□□□□ -0.2
LAMA4-205ENST00000389463 TOPBP1Q92547 1522 aa13.83□□□□□ -0.2
LAMA4-205ENST00000389463 PMFBP1Q8TBY8 1022 aa13.82□□□□□ -0.2
LAMA4-205ENST00000389463 CASKIN1Q8WXD9 1431 aa13.82□□□□□ -0.2
LAMA4-205ENST00000389463 CENPJQ9HC77 1338 aaPredicted RBP13.82□□□□□ -0.2
LAMA4-205ENST00000389463 GOLGA6L6A8MZA4 724 aa13.82□□□□□ -0.2
LAMA4-205ENST00000389463 SYTL4Q96C24 671 aaPredicted RBP13.82□□□□□ -0.2
LAMA4-205ENST00000389463 MYBBP1AQ9BQG0 1328 aaKnown RBP13.82□□□□□ -0.2
LAMA4-205ENST00000389463 FYCO1Q9BQS8 1478 aa13.82□□□□□ -0.2
LAMA4-205ENST00000389463 USP47Q96K76 1375 aa13.81□□□□□ -0.2
LAMA4-205ENST00000389463 PLCB2Q00722 1185 aa13.81□□□□□ -0.2
LAMA4-205ENST00000389463 RRP7AQ9Y3A4 280 aaKnown RBP13.81□□□□□ -0.2
LAMA4-205ENST00000389463 ANKRD50Q9ULJ7 1429 aa13.8□□□□□ -0.2
LAMA4-205ENST00000389463 DNTTIP2Q5QJE6 756 aaKnown RBP13.8□□□□□ -0.2
LAMA4-205ENST00000389463 TXNDC2Q86VQ3 553 aa13.8□□□□□ -0.2
LAMA4-205ENST00000389463 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
LAMA4-205ENST00000389463 PDE3BQ13370 1112 aa13.78□□□□□ -0.2
LAMA4-205ENST00000389463 NCOA2Q15596 1464 aa13.78□□□□□ -0.2
LAMA4-205ENST00000389463 DIAPH1O60610 1272 aaKnown RBP13.78□□□□□ -0.2
LAMA4-205ENST00000389463 CLUAP1Q96AJ1 413 aa13.78□□□□□ -0.2
LAMA4-205ENST00000389463 PROSER2Q86WR7 435 aaPredicted RBP13.78□□□□□ -0.2
LAMA4-205ENST00000389463 PHF23Q9BUL5 403 aaPredicted RBP13.78□□□□□ -0.2
LAMA4-205ENST00000389463 THEMISQ8N1K5 641 aaPredicted RBP13.77□□□□□ -0.2
LAMA4-205ENST00000389463 LRRC9Q6ZRR7 1453 aa13.77□□□□□ -0.21
LAMA4-205ENST00000389463 RAPGEF4Q8WZA2 1011 aa13.77□□□□□ -0.21
LAMA4-205ENST00000389463 MIA2Q96PC5 1412 aa13.77□□□□□ -0.21
LAMA4-205ENST00000389463 POLA1P09884 1462 aaPredicted RBP13.76□□□□□ -0.21
LAMA4-205ENST00000389463 PLEKHH2Q8IVE3 1493 aa13.76□□□□□ -0.21
LAMA4-205ENST00000389463 NEXNQ0ZGT2 675 aa13.76□□□□□ -0.21
LAMA4-205ENST00000389463 NGEFQ8N5V2 710 aa13.76□□□□□ -0.21
LAMA4-205ENST00000389463 POGZQ7Z3K3 1410 aa13.75□□□□□ -0.21
LAMA4-205ENST00000389463 ELL2O00472 640 aaPredicted RBP13.75□□□□□ -0.21
LAMA4-205ENST00000389463 NRDCO43847 1150 aa13.75□□□□□ -0.21
LAMA4-205ENST00000389463 GPRASP1Q5JY77 1395 aa13.75□□□□□ -0.21
LAMA4-205ENST00000389463 KIF21BO75037 1637 aa13.75□□□□□ -0.21
LAMA4-205ENST00000389463 EIF2S2P20042 333 aaKnown RBP13.75□□□□□ -0.21
LAMA4-205ENST00000389463 DNMBPQ6XZF7 1577 aa13.74□□□□□ -0.21
LAMA4-205ENST00000389463 ERICH3Q5RHP9 1530 aa13.74□□□□□ -0.21
LAMA4-205ENST00000389463 NLRP2Q9NX02 1062 aa13.73□□□□□ -0.21
LAMA4-205ENST00000389463 RRBP1Q9P2E9 1410 aaKnown RBP13.73□□□□□ -0.21
LAMA4-205ENST00000389463 HSP90B1P14625 803 aaKnown RBP13.73□□□□□ -0.21
LAMA4-205ENST00000389463 TOMM22Q9NS69 142 aa13.73□□□□□ -0.21
LAMA4-205ENST00000389463 ESCO1Q5FWF5 840 aa13.73□□□□□ -0.21
LAMA4-205ENST00000389463 TMEM132EQ6IEE7 984 aa13.73□□□□□ -0.21
LAMA4-205ENST00000389463 SPRYD3Q8NCJ5 442 aa13.72□□□□□ -0.21
LAMA4-205ENST00000389463 SCAPERQ9BY12 1400 aa13.72□□□□□ -0.21
LAMA4-205ENST00000389463 SYNJ1O43426 1573 aa13.72□□□□□ -0.21
LAMA4-205ENST00000389463 NUTM2GQ5VZR2 741 aa13.72□□□□□ -0.21
LAMA4-205ENST00000389463 EFCAB5A4FU69 1503 aa13.72□□□□□ -0.21
LAMA4-205ENST00000389463 NLRP6P59044 892 aa13.71□□□□□ -0.21
LAMA4-205ENST00000389463 CABP2Q9NPB3 220 aa13.71□□□□□ -0.21
LAMA4-205ENST00000389463 DDX58O95786 925 aaKnown RBP13.71□□□□□ -0.22
LAMA4-205ENST00000389463 ERICH6BQ5W0A0 696 aa13.7□□□□□ -0.22
LAMA4-205ENST00000389463 E9PSI1 815 aa13.7□□□□□ -0.22
LAMA4-205ENST00000389463 HTATSF1O43719 755 aaKnown RBP13.7□□□□□ -0.22
LAMA4-205ENST00000389463 C9orf78Q9NZ63 289 aaPredicted RBP13.69□□□□□ -0.22
LAMA4-205ENST00000389463 RAPGEF3O95398 923 aa13.69□□□□□ -0.22
LAMA4-205ENST00000389463 ANKLE2Q86XL3 938 aa13.69□□□□□ -0.22
LAMA4-205ENST00000389463 LAMC3Q9Y6N6 1575 aa13.69□□□□□ -0.22
LAMA4-205ENST00000389463 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
LAMA4-205ENST00000389463 NOL10Q9BSC4 688 aaKnown RBP13.68□□□□□ -0.22
LAMA4-205ENST00000389463 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
LAMA4-205ENST00000389463 RIPK4P57078 832 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms