RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 PHLDB1Q86UU1 1377 aa16.53■□□□□ 0.24
PTPRN2-203ENST00000389418 NAP1L2Q9ULW6 460 aaPredicted RBP16.53■□□□□ 0.24
PTPRN2-203ENST00000389418 HDAC5Q9UQL6 1122 aa16.52■□□□□ 0.24
PTPRN2-203ENST00000389418 CDK11BP21127 795 aaKnown RBP16.52■□□□□ 0.24
PTPRN2-203ENST00000389418 BCL2L13Q9BXK5 485 aa16.51■□□□□ 0.23
PTPRN2-203ENST00000389418 ZRSR1Q15695 479 aaKnown RBP16.51■□□□□ 0.23
PTPRN2-203ENST00000389418 RAPGEF3O95398 923 aa16.5■□□□□ 0.23
PTPRN2-203ENST00000389418 NUTM2GQ5VZR2 741 aa16.5■□□□□ 0.23
PTPRN2-203ENST00000389418 LMOD3Q0VAK6 560 aa16.5■□□□□ 0.23
PTPRN2-203ENST00000389418 URB2Q14146 1524 aaKnown RBP16.49■□□□□ 0.23
PTPRN2-203ENST00000389418 KCNJ4P48050 445 aa16.49■□□□□ 0.23
PTPRN2-203ENST00000389418 SPRYD3Q8NCJ5 442 aa16.49■□□□□ 0.23
PTPRN2-203ENST00000389418 GOLGA2Q08379 1002 aa16.49■□□□□ 0.23
PTPRN2-203ENST00000389418 PDE3BQ13370 1112 aa16.49■□□□□ 0.23
PTPRN2-203ENST00000389418 FGD6Q6ZV73 1430 aa16.49■□□□□ 0.23
PTPRN2-203ENST00000389418 PRG4Q92954 1404 aaPredicted RBP16.48■□□□□ 0.23
PTPRN2-203ENST00000389418 SLC4A10Q6U841 1118 aa16.48■□□□□ 0.23
PTPRN2-203ENST00000389418 NOP58Q9Y2X3 529 aaKnown RBP16.47■□□□□ 0.23
PTPRN2-203ENST00000389418 RBM19Q9Y4C8 960 aaKnown RBP16.47■□□□□ 0.23
PTPRN2-203ENST00000389418 KIF15Q9NS87 1388 aa16.47■□□□□ 0.23
PTPRN2-203ENST00000389418 TCERG1O14776 1098 aaKnown RBP16.47■□□□□ 0.23
PTPRN2-203ENST00000389418 FGD1P98174 961 aa16.46■□□□□ 0.23
PTPRN2-203ENST00000389418 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.23
PTPRN2-203ENST00000389418 PRKRIP1Q9H875 184 aaPredicted RBP16.46■□□□□ 0.23
PTPRN2-203ENST00000389418 ARAP1Q96P48 1450 aa16.45■□□□□ 0.22
PTPRN2-203ENST00000389418 CASKIN1Q8WXD9 1431 aa16.44■□□□□ 0.22
PTPRN2-203ENST00000389418 MCCP23508 829 aa16.44■□□□□ 0.22
PTPRN2-203ENST00000389418 CHMP3Q9Y3E7 222 aa16.44■□□□□ 0.22
PTPRN2-203ENST00000389418 LRRC9Q6ZRR7 1453 aa16.44■□□□□ 0.22
PTPRN2-203ENST00000389418 STK31Q9BXU1 1019 aa16.44■□□□□ 0.22
PTPRN2-203ENST00000389418 EVC2Q86UK5 1308 aa16.43■□□□□ 0.22
PTPRN2-203ENST00000389418 PRDM2Q13029 1718 aa16.43■□□□□ 0.22
PTPRN2-203ENST00000389418 USP47Q96K76 1375 aa16.43■□□□□ 0.22
PTPRN2-203ENST00000389418 SMC4Q9NTJ3 1288 aa16.42■□□□□ 0.22
PTPRN2-203ENST00000389418 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.42■□□□□ 0.22
PTPRN2-203ENST00000389418 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
PTPRN2-203ENST00000389418 RWDD1Q9H446 243 aaPredicted RBP16.41■□□□□ 0.22
PTPRN2-203ENST00000389418 NECTIN2Q92692 538 aa16.41■□□□□ 0.22
PTPRN2-203ENST00000389418 TRIM44Q96DX7 344 aaPredicted RBP16.4■□□□□ 0.22
PTPRN2-203ENST00000389418 ISY1Q9ULR0 285 aaKnown RBP16.4■□□□□ 0.22
PTPRN2-203ENST00000389418 CFAP70Q5T0N1 1121 aa16.4■□□□□ 0.22
PTPRN2-203ENST00000389418 FYCO1Q9BQS8 1478 aa16.39■□□□□ 0.21
PTPRN2-203ENST00000389418 PLIN1O60240 522 aa16.39■□□□□ 0.21
PTPRN2-203ENST00000389418 MYBBP1AQ9BQG0 1328 aaKnown RBP16.39■□□□□ 0.21
PTPRN2-203ENST00000389418 KIAA0586Q9BVV6 1533 aa16.39■□□□□ 0.21
PTPRN2-203ENST00000389418 AMER1Q5JTC6 1135 aaPredicted RBP16.39■□□□□ 0.21
PTPRN2-203ENST00000389418 AEBP2Q6ZN18 517 aaPredicted RBP16.38■□□□□ 0.21
PTPRN2-203ENST00000389418 CGNL1Q0VF96 1302 aa16.38■□□□□ 0.21
PTPRN2-203ENST00000389418 EFCAB5A4FU69 1503 aa16.38■□□□□ 0.21
PTPRN2-203ENST00000389418 HSP90AB1P08238 724 aaKnown RBP16.38■□□□□ 0.21
PTPRN2-203ENST00000389418 CABP2Q9NPB3 220 aa16.38■□□□□ 0.21
PTPRN2-203ENST00000389418 GGNBP2Q9H3C7 697 aa16.38■□□□□ 0.21
PTPRN2-203ENST00000389418 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
PTPRN2-203ENST00000389418 COG3Q96JB2 828 aa16.37■□□□□ 0.21
PTPRN2-203ENST00000389418 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
PTPRN2-203ENST00000389418 USP35Q9P2H5 1018 aa16.37■□□□□ 0.21
PTPRN2-203ENST00000389418 NCOA2Q15596 1464 aa16.36■□□□□ 0.21
PTPRN2-203ENST00000389418 HMMRO75330 724 aa16.36■□□□□ 0.21
PTPRN2-203ENST00000389418 PSME1Q06323 249 aa16.36■□□□□ 0.21
PTPRN2-203ENST00000389418 PMFBP1Q8TBY8 1022 aa16.36■□□□□ 0.21
PTPRN2-203ENST00000389418 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
PTPRN2-203ENST00000389418 APAF1O14727 1248 aa16.35■□□□□ 0.21
PTPRN2-203ENST00000389418 HSCBQ8IWL3 235 aa16.35■□□□□ 0.21
PTPRN2-203ENST00000389418 EVA1CP58658 441 aa16.34■□□□□ 0.21
PTPRN2-203ENST00000389418 ANKRD50Q9ULJ7 1429 aa16.34■□□□□ 0.21
PTPRN2-203ENST00000389418 NBPF1Q3BBV0 1214 aa16.34■□□□□ 0.21
PTPRN2-203ENST00000389418 SCAPERQ9BY12 1400 aa16.34■□□□□ 0.21
PTPRN2-203ENST00000389418 SLC26A8Q96RN1 970 aa16.33■□□□□ 0.21
PTPRN2-203ENST00000389418 MAGI1Q96QZ7 1491 aaPredicted RBP16.33■□□□□ 0.21
PTPRN2-203ENST00000389418 HMOX1P09601 288 aa16.33■□□□□ 0.2
PTPRN2-203ENST00000389418 KIAA1211Q6ZU35 1233 aa16.33■□□□□ 0.2
PTPRN2-203ENST00000389418 BIVM-ERCC5R4GMW8 1640 aa16.32■□□□□ 0.2
PTPRN2-203ENST00000389418 PLCB2Q00722 1185 aa16.32■□□□□ 0.2
PTPRN2-203ENST00000389418 TSHZ2Q9NRE2 1034 aa16.32■□□□□ 0.2
PTPRN2-203ENST00000389418 EIF2S2P20042 333 aaKnown RBP16.31■□□□□ 0.2
PTPRN2-203ENST00000389418 CENPJQ9HC77 1338 aaPredicted RBP16.31■□□□□ 0.2
PTPRN2-203ENST00000389418 TXNDC2Q86VQ3 553 aa16.31■□□□□ 0.2
PTPRN2-203ENST00000389418 GTF2E1P29083 439 aaPredicted RBP16.3■□□□□ 0.2
PTPRN2-203ENST00000389418 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
PTPRN2-203ENST00000389418 PLEKHH2Q8IVE3 1493 aa16.3■□□□□ 0.2
PTPRN2-203ENST00000389418 ARHGAP5Q13017 1502 aa16.29■□□□□ 0.2
PTPRN2-203ENST00000389418 CUL7Q14999 1698 aa16.29■□□□□ 0.2
PTPRN2-203ENST00000389418 KIF7Q2M1P5 1343 aa16.29■□□□□ 0.2
PTPRN2-203ENST00000389418 PTMAP06454 111 aaKnown RBP16.28■□□□□ 0.2
PTPRN2-203ENST00000389418 TMX4Q9H1E5 349 aaPredicted RBP16.28■□□□□ 0.2
PTPRN2-203ENST00000389418 GPATCH3Q96I76 525 aa16.28■□□□□ 0.2
PTPRN2-203ENST00000389418 GOLGA6L4A6NEF3 574 aa16.28■□□□□ 0.2
PTPRN2-203ENST00000389418 MSH5O43196 834 aa16.28■□□□□ 0.2
PTPRN2-203ENST00000389418 MIA2Q96PC5 1412 aa16.27■□□□□ 0.2
PTPRN2-203ENST00000389418 RRBP1Q9P2E9 1410 aaKnown RBP16.27■□□□□ 0.2
PTPRN2-203ENST00000389418 TAF7LQ5H9L4 462 aa16.27■□□□□ 0.2
PTPRN2-203ENST00000389418 ZNF428Q96B54 188 aa16.27■□□□□ 0.2
PTPRN2-203ENST00000389418 RBM33Q96EV2 1170 aaKnown RBP16.27■□□□□ 0.2
PTPRN2-203ENST00000389418 ZBED9Q6R2W3 1325 aa16.27■□□□□ 0.2
PTPRN2-203ENST00000389418 GLIPR1L2Q4G1C9 344 aa16.27■□□□□ 0.19
PTPRN2-203ENST00000389418 IQGAP2Q13576 1575 aa16.27■□□□□ 0.19
PTPRN2-203ENST00000389418 TEFQ10587 303 aa16.26■□□□□ 0.19
PTPRN2-203ENST00000389418 GORABQ5T7V8 394 aa16.26■□□□□ 0.19
PTPRN2-203ENST00000389418 CCDC7Q96M83 1385 aa16.26■□□□□ 0.19
PTPRN2-203ENST00000389418 NRDCO43847 1150 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms