RNA–Protein interactions for RNA: ENST00000389385.8

RPH3A-201, Transcript of rabphilin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RPH3A, Length 4,679 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-201ENST00000389385 DDX11L8A8MPP1 907 aa14.36□□□□□ -0.11
RPH3A-201ENST00000389385 NAP1L2Q9ULW6 460 aaPredicted RBP14.36□□□□□ -0.11
RPH3A-201ENST00000389385 ERICH3Q5RHP9 1530 aa14.36□□□□□ -0.11
RPH3A-201ENST00000389385 ZBED9Q6R2W3 1325 aa14.35□□□□□ -0.11
RPH3A-201ENST00000389385 ARAP1Q96P48 1450 aa14.35□□□□□ -0.11
RPH3A-201ENST00000389385 TNNT3P45378 269 aaPredicted RBP14.35□□□□□ -0.11
RPH3A-201ENST00000389385 SOX12O15370 315 aa14.35□□□□□ -0.11
RPH3A-201ENST00000389385 ITPRIPQ8IWB1 547 aa14.35□□□□□ -0.11
RPH3A-201ENST00000389385 BICRAQ9NZM4 1560 aa14.35□□□□□ -0.11
RPH3A-201ENST00000389385 MYOM3Q5VTT5 1437 aa14.34□□□□□ -0.11
RPH3A-201ENST00000389385 SLC4A3P48751 1232 aa14.34□□□□□ -0.11
RPH3A-201ENST00000389385 CENPQQ7L2Z9 268 aaPredicted RBP14.34□□□□□ -0.11
RPH3A-201ENST00000389385 LRRC9Q6ZRR7 1453 aa14.34□□□□□ -0.11
RPH3A-201ENST00000389385 PRXQ9BXM0 1461 aa14.34□□□□□ -0.11
RPH3A-201ENST00000389385 CUX1P39880 1505 aa14.34□□□□□ -0.11
RPH3A-201ENST00000389385 DNAJC5Q9H3Z4 198 aa14.34□□□□□ -0.11
RPH3A-201ENST00000389385 TOPBP1Q92547 1522 aa14.34□□□□□ -0.11
RPH3A-201ENST00000389385 CCDC144AA2RUR9 1427 aa14.33□□□□□ -0.12
RPH3A-201ENST00000389385 CASKIN1Q8WXD9 1431 aa14.33□□□□□ -0.12
RPH3A-201ENST00000389385 FAM69CQ0P6D2 419 aa14.33□□□□□ -0.12
RPH3A-201ENST00000389385 TOP2BQ02880 1626 aa14.33□□□□□ -0.12
RPH3A-201ENST00000389385 TAOK2Q9UL54 1235 aa14.33□□□□□ -0.12
RPH3A-201ENST00000389385 KIAA1211Q6ZU35 1233 aa14.32□□□□□ -0.12
RPH3A-201ENST00000389385 POLA1P09884 1462 aaPredicted RBP14.32□□□□□ -0.12
RPH3A-201ENST00000389385 HDGFL2Q7Z4V5 671 aaPredicted RBP14.32□□□□□ -0.12
RPH3A-201ENST00000389385 PRKRIP1Q9H875 184 aaPredicted RBP14.32□□□□□ -0.12
RPH3A-201ENST00000389385 NUTM2DQ5VT03 806 aaPredicted RBP14.32□□□□□ -0.12
RPH3A-201ENST00000389385 APBB1O00213 710 aa14.32□□□□□ -0.12
RPH3A-201ENST00000389385 ST20-MTHFSA0A0A6YYL1 179 aa14.31□□□□□ -0.12
RPH3A-201ENST00000389385 EXOC6Q8TAG9 804 aa14.31□□□□□ -0.12
RPH3A-201ENST00000389385 U2AF1L5P0DN76 240 aaPredicted RBP14.3□□□□□ -0.12
RPH3A-201ENST00000389385 RRP1P56182 461 aaKnown RBP14.3□□□□□ -0.12
RPH3A-201ENST00000389385 U2AF1Q01081 240 aaKnown RBP eCLIP14.3□□□□□ -0.12
RPH3A-201ENST00000389385 EIF3AQ14152 1382 aaKnown RBP14.3□□□□□ -0.12
RPH3A-201ENST00000389385 MRC2Q9UBG0 1479 aa14.3□□□□□ -0.12
RPH3A-201ENST00000389385 CENPJQ9HC77 1338 aaPredicted RBP14.3□□□□□ -0.12
RPH3A-201ENST00000389385 HTATSF1O43719 755 aaKnown RBP14.29□□□□□ -0.12
RPH3A-201ENST00000389385 CLUAP1Q96AJ1 413 aa14.29□□□□□ -0.12
RPH3A-201ENST00000389385 SKOR2Q2VWA4 1001 aaPredicted RBP14.29□□□□□ -0.12
RPH3A-201ENST00000389385 SMC4Q9NTJ3 1288 aa14.27□□□□□ -0.12
RPH3A-201ENST00000389385 DDX49Q9Y6V7 483 aaKnown RBP14.27□□□□□ -0.12
RPH3A-201ENST00000389385 NCOA2Q15596 1464 aa14.27□□□□□ -0.13
RPH3A-201ENST00000389385 FOXD4L1Q9NU39 408 aa14.27□□□□□ -0.13
RPH3A-201ENST00000389385 PHF14O94880 888 aa14.27□□□□□ -0.13
RPH3A-201ENST00000389385 TRAK1Q9UPV9 953 aa14.26□□□□□ -0.13
RPH3A-201ENST00000389385 MYBBP1AQ9BQG0 1328 aaKnown RBP14.26□□□□□ -0.13
RPH3A-201ENST00000389385 IFT140Q96RY7 1462 aa14.25□□□□□ -0.13
RPH3A-201ENST00000389385 KIF15Q9NS87 1388 aa14.25□□□□□ -0.13
RPH3A-201ENST00000389385 CSPP1Q1MSJ5 1256 aa14.24□□□□□ -0.13
RPH3A-201ENST00000389385 ST18O60284 1047 aa14.24□□□□□ -0.13
RPH3A-201ENST00000389385 FYCO1Q9BQS8 1478 aa14.24□□□□□ -0.13
RPH3A-201ENST00000389385 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
RPH3A-201ENST00000389385 PLIN1O60240 522 aa14.23□□□□□ -0.13
RPH3A-201ENST00000389385 CRBNQ96SW2 442 aa14.23□□□□□ -0.13
RPH3A-201ENST00000389385 UACAQ9BZF9 1416 aa14.22□□□□□ -0.13
RPH3A-201ENST00000389385 TERF2IPQ9NYB0 399 aa14.22□□□□□ -0.13
RPH3A-201ENST00000389385 CGNL1Q0VF96 1302 aa14.22□□□□□ -0.13
RPH3A-201ENST00000389385 EID1Q9Y6B2 187 aa14.21□□□□□ -0.13
RPH3A-201ENST00000389385 PRG4Q92954 1404 aaPredicted RBP14.21□□□□□ -0.13
RPH3A-201ENST00000389385 NFKBIBQ15653 356 aa14.21□□□□□ -0.13
RPH3A-201ENST00000389385 CCDC146Q8IYE0 955 aa14.21□□□□□ -0.13
RPH3A-201ENST00000389385 USP47Q96K76 1375 aa14.21□□□□□ -0.14
RPH3A-201ENST00000389385 DNMBPQ6XZF7 1577 aa14.21□□□□□ -0.14
RPH3A-201ENST00000389385 TPM4P67936 248 aa14.21□□□□□ -0.14
RPH3A-201ENST00000389385 HMMRO75330 724 aa14.2□□□□□ -0.14
RPH3A-201ENST00000389385 ANKRD50Q9ULJ7 1429 aa14.2□□□□□ -0.14
RPH3A-201ENST00000389385 RTF1Q92541 710 aaKnown RBP14.2□□□□□ -0.14
RPH3A-201ENST00000389385 CHMP5Q9NZZ3 219 aa14.2□□□□□ -0.14
RPH3A-201ENST00000389385 PAK3O75914 559 aaPredicted RBP14.2□□□□□ -0.14
RPH3A-201ENST00000389385 VGFO15240 615 aaPredicted RBP14.2□□□□□ -0.14
RPH3A-201ENST00000389385 GNL2Q13823 731 aaKnown RBP14.19□□□□□ -0.14
RPH3A-201ENST00000389385 PANK3Q9H999 370 aa14.19□□□□□ -0.14
RPH3A-201ENST00000389385 EFCAB5A4FU69 1503 aa14.19□□□□□ -0.14
RPH3A-201ENST00000389385 RRBP1Q9P2E9 1410 aaKnown RBP14.18□□□□□ -0.14
RPH3A-201ENST00000389385 FAM43AQ8N2R8 423 aa14.18□□□□□ -0.14
RPH3A-201ENST00000389385 FAM13BQ9NYF5 915 aa14.18□□□□□ -0.14
RPH3A-201ENST00000389385 AFAP1Q8N556 730 aa14.17□□□□□ -0.14
RPH3A-201ENST00000389385 GOLGA6L1Q8N7Z2 621 aa14.17□□□□□ -0.14
RPH3A-201ENST00000389385 SYNJ2O15056 1496 aa14.17□□□□□ -0.14
RPH3A-201ENST00000389385 TRIM6-TRIM34B2RNG4 842 aa14.17□□□□□ -0.14
RPH3A-201ENST00000389385 TULP1O00294 542 aaPredicted RBP14.17□□□□□ -0.14
RPH3A-201ENST00000389385 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.17□□□□□ -0.14
RPH3A-201ENST00000389385 SNAPC4Q5SXM2 1469 aa14.16□□□□□ -0.14
RPH3A-201ENST00000389385 NOL8Q76FK4 1167 aaKnown RBP14.16□□□□□ -0.14
RPH3A-201ENST00000389385 E9PSI1 815 aa14.15□□□□□ -0.14
RPH3A-201ENST00000389385 NUTM2FA1L443 756 aa14.15□□□□□ -0.14
RPH3A-201ENST00000389385 FOXD4L5Q5VV16 416 aaPredicted RBP14.15□□□□□ -0.14
RPH3A-201ENST00000389385 FOXD4L4Q8WXT5 416 aaPredicted RBP14.15□□□□□ -0.14
RPH3A-201ENST00000389385 ABCA10Q8WWZ4 1543 aa14.14□□□□□ -0.15
RPH3A-201ENST00000389385 ANO8Q9HCE9 1232 aaPredicted RBP14.14□□□□□ -0.15
RPH3A-201ENST00000389385 COG6Q9Y2V7 657 aa14.14□□□□□ -0.15
RPH3A-201ENST00000389385 NGDNQ8NEJ9 315 aaKnown RBP14.13□□□□□ -0.15
RPH3A-201ENST00000389385 CCDC34Q96HJ3 373 aa14.12□□□□□ -0.15
RPH3A-201ENST00000389385 STK31Q9BXU1 1019 aa14.12□□□□□ -0.15
RPH3A-201ENST00000389385 ATP6V1DQ9Y5K8 247 aa14.12□□□□□ -0.15
RPH3A-201ENST00000389385 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.12□□□□□ -0.15
RPH3A-201ENST00000389385 ZKSCAN2Q63HK3 967 aa14.12□□□□□ -0.15
RPH3A-201ENST00000389385 KIF16BQ96L93 1317 aa14.12□□□□□ -0.15
RPH3A-201ENST00000389385 MRE11P49959 708 aa14.12□□□□□ -0.15
RPH3A-201ENST00000389385 ZNF771Q7L3S4 317 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms