RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 CDK11BP21127 795 aaKnown RBP6.29□□□□□ -1.4
LTN1-202ENST00000389194 WASHC2AQ641Q2 1341 aa6.29□□□□□ -1.4
LTN1-202ENST00000389194 PANK1Q8TE04 598 aa6.29□□□□□ -1.4
LTN1-202ENST00000389194 PHLDB1Q86UU1 1377 aa6.29□□□□□ -1.4
LTN1-202ENST00000389194 WASHC2CQ9Y4E1 1318 aa6.28□□□□□ -1.4
LTN1-202ENST00000389194 CCDC18Q5T9S5 1454 aa6.28□□□□□ -1.4
LTN1-202ENST00000389194 KIF7Q2M1P5 1343 aa6.28□□□□□ -1.4
LTN1-202ENST00000389194 CSB-PGBD3P0DP91 1061 aa6.28□□□□□ -1.4
LTN1-202ENST00000389194 TMEM132EQ6IEE7 984 aa6.28□□□□□ -1.4
LTN1-202ENST00000389194 TOP2AP11388 1531 aaKnown RBP6.28□□□□□ -1.4
LTN1-202ENST00000389194 RILPL2Q969X0 211 aa6.28□□□□□ -1.4
LTN1-202ENST00000389194 MYBBP1AQ9BQG0 1328 aaKnown RBP6.28□□□□□ -1.4
LTN1-202ENST00000389194 EFCAB2Q5VUJ9 269 aa6.28□□□□□ -1.4
LTN1-202ENST00000389194 IPO8O15397 1037 aaKnown RBP6.28□□□□□ -1.4
LTN1-202ENST00000389194 MS4A1P11836 297 aa6.28□□□□□ -1.4
LTN1-202ENST00000389194 HMOX1P09601 288 aa6.27□□□□□ -1.41
LTN1-202ENST00000389194 SPAG9O60271 1321 aaKnown RBP6.27□□□□□ -1.41
LTN1-202ENST00000389194 RAD54L2Q9Y4B4 1467 aa6.27□□□□□ -1.41
LTN1-202ENST00000389194 PNNQ9H307 717 aaKnown RBP6.27□□□□□ -1.41
LTN1-202ENST00000389194 KIAA1211Q6ZU35 1233 aa6.27□□□□□ -1.41
LTN1-202ENST00000389194 GOLGA6L3A6NEY3 463 aa6.27□□□□□ -1.41
LTN1-202ENST00000389194 PDS5BQ9NTI5 1447 aa6.26□□□□□ -1.41
LTN1-202ENST00000389194 NUTM2GQ5VZR2 741 aa6.26□□□□□ -1.41
LTN1-202ENST00000389194 L1TD1Q5T7N2 865 aaKnown RBP6.26□□□□□ -1.41
LTN1-202ENST00000389194 CREBRFQ8IUR6 639 aa6.26□□□□□ -1.41
LTN1-202ENST00000389194 NGDNQ8NEJ9 315 aaKnown RBP6.26□□□□□ -1.41
LTN1-202ENST00000389194 ZBED9Q6R2W3 1325 aa6.26□□□□□ -1.41
LTN1-202ENST00000389194 PDE4CQ08493 712 aa6.26□□□□□ -1.41
LTN1-202ENST00000389194 NBPF1Q3BBV0 1214 aa6.26□□□□□ -1.41
LTN1-202ENST00000389194 AKNAQ7Z591 1439 aa6.26□□□□□ -1.41
LTN1-202ENST00000389194 KIF15Q9NS87 1388 aa6.26□□□□□ -1.41
LTN1-202ENST00000389194 HSP90B1P14625 803 aaKnown RBP6.26□□□□□ -1.41
LTN1-202ENST00000389194 EIF2S2P20042 333 aaKnown RBP6.26□□□□□ -1.41
LTN1-202ENST00000389194 MCCP23508 829 aa6.25□□□□□ -1.41
LTN1-202ENST00000389194 LNPKQ9C0E8 428 aa6.25□□□□□ -1.41
LTN1-202ENST00000389194 AMPHP49418 695 aa6.25□□□□□ -1.41
LTN1-202ENST00000389194 PMFBP1Q8TBY8 1022 aa6.25□□□□□ -1.41
LTN1-202ENST00000389194 ADAMTS8Q9UP79 889 aa6.25□□□□□ -1.41
LTN1-202ENST00000389194 GBP4Q96PP9 640 aa6.25□□□□□ -1.41
LTN1-202ENST00000389194 GGNBP2Q9H3C7 697 aa6.25□□□□□ -1.41
LTN1-202ENST00000389194 FAM161AQ3B820 660 aa6.25□□□□□ -1.41
LTN1-202ENST00000389194 FOSBP53539 338 aa6.24□□□□□ -1.41
LTN1-202ENST00000389194 GNL2Q13823 731 aaKnown RBP6.24□□□□□ -1.41
LTN1-202ENST00000389194 IL27Q8NEV9 243 aa6.24□□□□□ -1.41
LTN1-202ENST00000389194 CCDC144AA2RUR9 1427 aa6.24□□□□□ -1.41
LTN1-202ENST00000389194 STK31Q9BXU1 1019 aa6.24□□□□□ -1.41
LTN1-202ENST00000389194 NBPF8Q3BBV2 869 aa6.24□□□□□ -1.41
LTN1-202ENST00000389194 FBXW7Q969H0 707 aa6.24□□□□□ -1.41
LTN1-202ENST00000389194 C1orf115Q9H7X2 142 aa6.24□□□□□ -1.41
LTN1-202ENST00000389194 CARMIL2Q6F5E8 1435 aa6.24□□□□□ -1.41
LTN1-202ENST00000389194 GSE1Q14687 1217 aa6.24□□□□□ -1.41
LTN1-202ENST00000389194 CADPSQ9ULU8 1353 aa6.24□□□□□ -1.41
LTN1-202ENST00000389194 CALD1Q05682 793 aaKnown RBP6.23□□□□□ -1.41
LTN1-202ENST00000389194 CABP2Q9NPB3 220 aa6.23□□□□□ -1.41
LTN1-202ENST00000389194 ATAD2BQ9ULI0 1458 aa6.23□□□□□ -1.41
LTN1-202ENST00000389194 CLSTN1O94985 981 aa6.23□□□□□ -1.41
LTN1-202ENST00000389194 MPNDQ8N594 471 aa6.23□□□□□ -1.41
LTN1-202ENST00000389194 BRPF3Q9ULD4 1205 aa6.23□□□□□ -1.41
LTN1-202ENST00000389194 CYB5RLQ6IPT4 315 aa6.23□□□□□ -1.41
LTN1-202ENST00000389194 CCDC7Q96M83 1385 aa6.23□□□□□ -1.41
LTN1-202ENST00000389194 CHMP4BQ9H444 224 aaKnown RBP6.23□□□□□ -1.41
LTN1-202ENST00000389194 TERF2IPQ9NYB0 399 aa6.23□□□□□ -1.41
LTN1-202ENST00000389194 KDM4AO75164 1064 aa6.23□□□□□ -1.41
LTN1-202ENST00000389194 BCAR3O75815 825 aa6.23□□□□□ -1.41
LTN1-202ENST00000389194 RIPK4P57078 832 aa6.23□□□□□ -1.41
LTN1-202ENST00000389194 CENPQQ7L2Z9 268 aaPredicted RBP6.23□□□□□ -1.41
LTN1-202ENST00000389194 DDX49Q9Y6V7 483 aaKnown RBP6.23□□□□□ -1.41
LTN1-202ENST00000389194 SMARCA4P51532 1647 aa6.22□□□□□ -1.41
LTN1-202ENST00000389194 IGF1RP08069 1367 aa6.22□□□□□ -1.41
LTN1-202ENST00000389194 GORABQ5T7V8 394 aa6.22□□□□□ -1.41
LTN1-202ENST00000389194 SMARCA2P51531 1590 aa6.22□□□□□ -1.41
LTN1-202ENST00000389194 TOMM22Q9NS69 142 aa6.22□□□□□ -1.41
LTN1-202ENST00000389194 KIF21BO75037 1637 aa6.22□□□□□ -1.41
LTN1-202ENST00000389194 CHAF1AQ13111 956 aaPredicted RBP6.21□□□□□ -1.41
LTN1-202ENST00000389194 PRDM2Q13029 1718 aa6.21□□□□□ -1.42
LTN1-202ENST00000389194 ZKSCAN2Q63HK3 967 aa6.21□□□□□ -1.42
LTN1-202ENST00000389194 AFAP1Q8N556 730 aa6.21□□□□□ -1.42
LTN1-202ENST00000389194 NFKBIBQ15653 356 aa6.21□□□□□ -1.42
LTN1-202ENST00000389194 TSR2Q969E8 191 aaKnown RBP6.21□□□□□ -1.42
LTN1-202ENST00000389194 ARAP1Q96P48 1450 aa6.21□□□□□ -1.42
LTN1-202ENST00000389194 CFAP70Q5T0N1 1121 aa6.21□□□□□ -1.42
LTN1-202ENST00000389194 PDE3BQ13370 1112 aa6.21□□□□□ -1.42
LTN1-202ENST00000389194 FRAT2O75474 233 aaPredicted RBP6.2□□□□□ -1.42
LTN1-202ENST00000389194 E9PSI1 815 aa6.2□□□□□ -1.42
LTN1-202ENST00000389194 TAF7LQ5H9L4 462 aa6.2□□□□□ -1.42
LTN1-202ENST00000389194 AQRO60306 1485 aaKnown RBP eCLIP6.2□□□□□ -1.422e-6■■■■□ 20
LTN1-202ENST00000389194 FGD5Q6ZNL6 1462 aa6.2□□□□□ -1.42
LTN1-202ENST00000389194 FANCD2Q9BXW9 1451 aa6.2□□□□□ -1.42
LTN1-202ENST00000389194 MTHFSP49914 203 aa6.2□□□□□ -1.42
LTN1-202ENST00000389194 KIAA2012Q0VF49 1180 aa6.2□□□□□ -1.42
LTN1-202ENST00000389194 FGD6Q6ZV73 1430 aa6.19□□□□□ -1.42
LTN1-202ENST00000389194 EIF3AQ14152 1382 aaKnown RBP6.19□□□□□ -1.42
LTN1-202ENST00000389194 DZIP1LQ8IYY4 767 aaKnown RBP6.19□□□□□ -1.42
LTN1-202ENST00000389194 RNF214Q8ND24 703 aa6.19□□□□□ -1.42
LTN1-202ENST00000389194 FANCIQ9NVI1 1328 aa6.19□□□□□ -1.42
LTN1-202ENST00000389194 WDR97A6NE52 1622 aa6.19□□□□□ -1.42
LTN1-202ENST00000389194 CFTRP13569 1480 aa6.19□□□□□ -1.42
LTN1-202ENST00000389194 SLC12A5Q9H2X9 1139 aa6.19□□□□□ -1.42
LTN1-202ENST00000389194 CGNL1Q0VF96 1302 aa6.18□□□□□ -1.42
LTN1-202ENST00000389194 MSH5O43196 834 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms