RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 TIMELESSQ9UNS1 1208 aa18.67■□□□□ 0.58
LRRK1-201ENST00000388948 VGFO15240 615 aaPredicted RBP18.67■□□□□ 0.58
LRRK1-201ENST00000388948 TTC5Q8N0Z6 440 aa18.67■□□□□ 0.58
LRRK1-201ENST00000388948 MARCH6O60337 910 aa18.66■□□□□ 0.58
LRRK1-201ENST00000388948 TEFQ10587 303 aa18.65■□□□□ 0.58
LRRK1-201ENST00000388948 FHOD3Q2V2M9 1422 aa18.65■□□□□ 0.58
LRRK1-201ENST00000388948 TRIM34Q9BYJ4 488 aa18.65■□□□□ 0.58
LRRK1-201ENST00000388948 MROH2BQ7Z745 1585 aa18.65■□□□□ 0.58
LRRK1-201ENST00000388948 RALBP1Q15311 655 aa18.65■□□□□ 0.58
LRRK1-201ENST00000388948 CCDC146Q8IYE0 955 aa18.64■□□□□ 0.57
LRRK1-201ENST00000388948 RWDD1Q9H446 243 aaPredicted RBP18.63■□□□□ 0.57
LRRK1-201ENST00000388948 L1TD1Q5T7N2 865 aaKnown RBP18.63■□□□□ 0.57
LRRK1-201ENST00000388948 VPS8Q8N3P4 1428 aa18.63■□□□□ 0.57
LRRK1-201ENST00000388948 RAD21O60216 631 aa18.62■□□□□ 0.57
LRRK1-201ENST00000388948 MINK1Q8N4C8 1332 aaPredicted RBP18.62■□□□□ 0.57
LRRK1-201ENST00000388948 FBXW7Q969H0 707 aa18.62■□□□□ 0.57
LRRK1-201ENST00000388948 CTDP1Q9Y5B0 961 aaPredicted RBP18.62■□□□□ 0.57
LRRK1-201ENST00000388948 NOL10Q9BSC4 688 aaKnown RBP18.61■□□□□ 0.57
LRRK1-201ENST00000388948 HTATSF1O43719 755 aaKnown RBP18.6■□□□□ 0.57
LRRK1-201ENST00000388948 RAPGEF2Q9Y4G8 1499 aa18.6■□□□□ 0.57
LRRK1-201ENST00000388948 CCDC34Q96HJ3 373 aa18.6■□□□□ 0.57
LRRK1-201ENST00000388948 UACAQ9BZF9 1416 aa18.59■□□□□ 0.57
LRRK1-201ENST00000388948 EVC2Q86UK5 1308 aa18.58■□□□□ 0.56
LRRK1-201ENST00000388948 CWC22Q9HCG8 908 aaKnown RBP18.58■□□□□ 0.56
LRRK1-201ENST00000388948 CLUAP1Q96AJ1 413 aa18.58■□□□□ 0.56
LRRK1-201ENST00000388948 PDE4CQ08493 712 aa18.57■□□□□ 0.56
LRRK1-201ENST00000388948 CCDC144AA2RUR9 1427 aa18.57■□□□□ 0.56
LRRK1-201ENST00000388948 VPS37DQ86XT2 251 aa18.56■□□□□ 0.56
LRRK1-201ENST00000388948 NEXNQ0ZGT2 675 aa18.56■□□□□ 0.56
LRRK1-201ENST00000388948 ERICH6BQ5W0A0 696 aa18.56■□□□□ 0.56
LRRK1-201ENST00000388948 RCAN3Q9UKA8 241 aa18.56■□□□□ 0.56
LRRK1-201ENST00000388948 RAB3GAP2Q9H2M9 1393 aa18.55■□□□□ 0.56
LRRK1-201ENST00000388948 AMOTL1Q8IY63 956 aa18.55■□□□□ 0.56
LRRK1-201ENST00000388948 TCEAL9Q9UHQ7 104 aa18.55■□□□□ 0.56
LRRK1-201ENST00000388948 CREBRFQ8IUR6 639 aa18.55■□□□□ 0.56
LRRK1-201ENST00000388948 EIF2S2P20042 333 aaKnown RBP18.55■□□□□ 0.56
LRRK1-201ENST00000388948 FANCD2Q9BXW9 1451 aa18.54■□□□□ 0.56
LRRK1-201ENST00000388948 NOC3LQ8WTT2 800 aaKnown RBP18.54■□□□□ 0.56
LRRK1-201ENST00000388948 ELL2O00472 640 aaPredicted RBP18.54■□□□□ 0.56
LRRK1-201ENST00000388948 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.53■□□□□ 0.56
LRRK1-201ENST00000388948 L3MBTL2Q969R5 705 aa18.53■□□□□ 0.56
LRRK1-201ENST00000388948 KRI1Q8N9T8 703 aaKnown RBP18.53■□□□□ 0.56
LRRK1-201ENST00000388948 RRP7AQ9Y3A4 280 aaKnown RBP18.53■□□□□ 0.56
LRRK1-201ENST00000388948 SF3B2Q13435 895 aaKnown RBP18.52■□□□□ 0.56
LRRK1-201ENST00000388948 PMFBP1Q8TBY8 1022 aa18.52■□□□□ 0.55
LRRK1-201ENST00000388948 CGNL1Q0VF96 1302 aa18.51■□□□□ 0.55
LRRK1-201ENST00000388948 WIZO95785 1651 aa18.5■□□□□ 0.55
LRRK1-201ENST00000388948 NOL8Q76FK4 1167 aaKnown RBP18.5■□□□□ 0.55
LRRK1-201ENST00000388948 PPP1R1BQ9UD71 204 aaPredicted RBP18.5■□□□□ 0.55
LRRK1-201ENST00000388948 C9orf78Q9NZ63 289 aaPredicted RBP18.49■□□□□ 0.55
LRRK1-201ENST00000388948 RAPGEF4Q8WZA2 1011 aa18.49■□□□□ 0.55
LRRK1-201ENST00000388948 CENPJQ9HC77 1338 aaPredicted RBP18.48■□□□□ 0.55
LRRK1-201ENST00000388948 AKAP17AQ02040 695 aaKnown RBP18.48■□□□□ 0.55
LRRK1-201ENST00000388948 RBM33Q96EV2 1170 aaKnown RBP18.48■□□□□ 0.55
LRRK1-201ENST00000388948 USP35Q9P2H5 1018 aa18.48■□□□□ 0.55
LRRK1-201ENST00000388948 TPM4P67936 248 aa18.48■□□□□ 0.55
LRRK1-201ENST00000388948 ANO8Q9HCE9 1232 aaPredicted RBP18.48■□□□□ 0.55
LRRK1-201ENST00000388948 NECTIN2Q92692 538 aa18.47■□□□□ 0.55
LRRK1-201ENST00000388948 CCER2I3L3R5 266 aa18.47■□□□□ 0.55
LRRK1-201ENST00000388948 NAP1L5Q96NT1 182 aaPredicted RBP18.47■□□□□ 0.55
LRRK1-201ENST00000388948 MFAP1P55081 439 aaKnown RBP18.46■□□□□ 0.55
LRRK1-201ENST00000388948 CEP89Q96ST8 783 aa18.46■□□□□ 0.55
LRRK1-201ENST00000388948 NLRP2Q9NX02 1062 aa18.45■□□□□ 0.54
LRRK1-201ENST00000388948 PRDM2Q13029 1718 aa18.45■□□□□ 0.54
LRRK1-201ENST00000388948 CNKSR2Q8WXI2 1034 aa18.45■□□□□ 0.54
LRRK1-201ENST00000388948 NOP58Q9Y2X3 529 aaKnown RBP18.45■□□□□ 0.54
LRRK1-201ENST00000388948 SAMD1Q6SPF0 538 aaPredicted RBP18.45■□□□□ 0.54
LRRK1-201ENST00000388948 NUTM2GQ5VZR2 741 aa18.44■□□□□ 0.54
LRRK1-201ENST00000388948 NLRP13Q86W25 1043 aa18.44■□□□□ 0.54
LRRK1-201ENST00000388948 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
LRRK1-201ENST00000388948 PANK3Q9H999 370 aa18.44■□□□□ 0.54
LRRK1-201ENST00000388948 RILPL2Q969X0 211 aa18.44■□□□□ 0.54
LRRK1-201ENST00000388948 LRRFIP1Q32MZ4 808 aaKnown RBP18.44■□□□□ 0.54
LRRK1-201ENST00000388948 DHX16O60231 1041 aaKnown RBP18.43■□□□□ 0.54
LRRK1-201ENST00000388948 MSNP26038 577 aaKnown RBP18.43■□□□□ 0.54
LRRK1-201ENST00000388948 WWC1Q8IX03 1113 aa18.43■□□□□ 0.54
LRRK1-201ENST00000388948 GBP4Q96PP9 640 aa18.43■□□□□ 0.54
LRRK1-201ENST00000388948 KIF3AQ9Y496 699 aa18.43■□□□□ 0.54
LRRK1-201ENST00000388948 ST20-MTHFSA0A0A6YYL1 179 aa18.43■□□□□ 0.54
LRRK1-201ENST00000388948 SF3A1Q15459 793 aaKnown RBP18.43■□□□□ 0.54
LRRK1-201ENST00000388948 KIF16BQ96L93 1317 aa18.43■□□□□ 0.54
LRRK1-201ENST00000388948 APPP05067 770 aa18.42■□□□□ 0.54
LRRK1-201ENST00000388948 DDX58O95786 925 aaKnown RBP18.42■□□□□ 0.54
LRRK1-201ENST00000388948 SYNE3Q6ZMZ3 975 aa18.42■□□□□ 0.54
LRRK1-201ENST00000388948 NUTM2BA6NNL0 878 aaPredicted RBP18.41■□□□□ 0.54
LRRK1-201ENST00000388948 NUTM2EB1AL46 878 aaPredicted RBP18.41■□□□□ 0.54
LRRK1-201ENST00000388948 NUTM2AQ8IVF1 878 aaPredicted RBP18.41■□□□□ 0.54
LRRK1-201ENST00000388948 PROSER2Q86WR7 435 aaPredicted RBP18.4■□□□□ 0.54
LRRK1-201ENST00000388948 PES1O00541 588 aaKnown RBP18.39■□□□□ 0.54
LRRK1-201ENST00000388948 SYAP1Q96A49 352 aaPredicted RBP18.39■□□□□ 0.54
LRRK1-201ENST00000388948 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.53
LRRK1-201ENST00000388948 PIP4K2BP78356 416 aa18.38■□□□□ 0.53
LRRK1-201ENST00000388948 BCL2L13Q9BXK5 485 aa18.38■□□□□ 0.53
LRRK1-201ENST00000388948 H3BQV1 296 aa18.37■□□□□ 0.53
LRRK1-201ENST00000388948 IFFO2Q5TF58 517 aa18.37■□□□□ 0.53
LRRK1-201ENST00000388948 STRN4Q9NRL3 753 aa18.37■□□□□ 0.53
LRRK1-201ENST00000388948 WASHC2AQ641Q2 1341 aa18.37■□□□□ 0.53
LRRK1-201ENST00000388948 ESCO1Q5FWF5 840 aa18.37■□□□□ 0.53
LRRK1-201ENST00000388948 CSPP1Q1MSJ5 1256 aa18.37■□□□□ 0.53
LRRK1-201ENST00000388948 SLKQ9H2G2 1235 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms