RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ANO8Q9HCE9 1232 aaPredicted RBP2.11□□□□□ -2.07
SNORD28-201ENST00000384706 KRTAP9-6A0A140TA67 174 aa2.1□□□□□ -2.07
SNORD28-201ENST00000384706 JPH4Q96JJ6 628 aa2.1□□□□□ -2.07
SNORD28-201ENST00000384706 ADAM33Q9BZ11 813 aa2.1□□□□□ -2.07
SNORD28-201ENST00000384706 NBPF3Q9H094 633 aa2.1□□□□□ -2.07
SNORD28-201ENST00000384706 CRISPLD2Q9H0B8 497 aa2.1□□□□□ -2.07
SNORD28-201ENST00000384706 RYDENQ9NUL5 291 aaKnown RBP2.1□□□□□ -2.07
SNORD28-201ENST00000384706 NCKAP5LQ9HCH0 1330 aa2.1□□□□□ -2.07
SNORD28-201ENST00000384706 PROX2Q3B8N5 592 aa2.09□□□□□ -2.07
SNORD28-201ENST00000384706 DDX27Q96GQ7 796 aaKnown RBP2.09□□□□□ -2.07
SNORD28-201ENST00000384706 POTECB2RU33 542 aa2.08□□□□□ -2.08
SNORD28-201ENST00000384706 GTPBP6O43824 516 aaPredicted RBP2.08□□□□□ -2.08
SNORD28-201ENST00000384706 DCAF8L2P0C7V8 631 aa2.08□□□□□ -2.08
SNORD28-201ENST00000384706 COL9A1P20849 921 aa2.08□□□□□ -2.08
SNORD28-201ENST00000384706 BCAMP50895 628 aa2.08□□□□□ -2.08
SNORD28-201ENST00000384706 KRTAP1-3Q8IUG1 177 aa2.08□□□□□ -2.08
SNORD28-201ENST00000384706 ANKK1Q8NFD2 765 aa2.08□□□□□ -2.08
SNORD28-201ENST00000384706 DNAJC5Q9H3Z4 198 aa2.08□□□□□ -2.08
SNORD28-201ENST00000384706 KIAA1468Q9P260 1216 aa2.08□□□□□ -2.08
SNORD28-201ENST00000384706 RABGEF1Q9UJ41 708 aa2.08□□□□□ -2.08
SNORD28-201ENST00000384706 PCDHGA10Q9Y5H3 936 aa2.08□□□□□ -2.08
SNORD28-201ENST00000384706 SOWAHBA6NEL2 793 aa2.07□□□□□ -2.08
SNORD28-201ENST00000384706 PPP1R3GB7ZBB8 358 aa2.07□□□□□ -2.08
SNORD28-201ENST00000384706 INSM1Q01101 510 aaPredicted RBP2.07□□□□□ -2.08
SNORD28-201ENST00000384706 TYW1BQ6NUM6 668 aa2.07□□□□□ -2.08
SNORD28-201ENST00000384706 FBXW7Q969H0 707 aa2.07□□□□□ -2.08
SNORD28-201ENST00000384706 RBM33Q96EV2 1170 aaKnown RBP2.07□□□□□ -2.08
SNORD28-201ENST00000384706 ZFRQ96KR1 1074 aaKnown RBP2.07□□□□□ -2.08
SNORD28-201ENST00000384706 EMILIN3Q9NT22 766 aa2.07□□□□□ -2.08
SNORD28-201ENST00000384706 WBP1LQ9NX94 342 aa2.07□□□□□ -2.08
SNORD28-201ENST00000384706 SEPT9Q9UHD8 586 aaPredicted RBP2.07□□□□□ -2.08
SNORD28-201ENST00000384706 PHF14O94880 888 aa2.06□□□□□ -2.08
SNORD28-201ENST00000384706 KCNC4Q03721 635 aa2.06□□□□□ -2.08
SNORD28-201ENST00000384706 C6orf132Q5T0Z8 1188 aa2.06□□□□□ -2.08
SNORD28-201ENST00000384706 LAPTM4BQ86VI4 370 aa2.06□□□□□ -2.08
SNORD28-201ENST00000384706 TRIM6-TRIM34B2RNG4 842 aa2.05□□□□□ -2.08
SNORD28-201ENST00000384706 DPYSL4O14531 572 aa2.05□□□□□ -2.08
SNORD28-201ENST00000384706 PPP4CP60510 307 aa2.05□□□□□ -2.08
SNORD28-201ENST00000384706 MFSD10Q14728 455 aa2.05□□□□□ -2.08
SNORD28-201ENST00000384706 XP32Q5T750 250 aa2.05□□□□□ -2.08
SNORD28-201ENST00000384706 NYAP1Q6ZVC0 841 aa2.05□□□□□ -2.08
SNORD28-201ENST00000384706 CADPS2Q86UW7 1296 aa2.05□□□□□ -2.08
SNORD28-201ENST00000384706 DDX12PQ92771 950 aa2.05□□□□□ -2.08
SNORD28-201ENST00000384706 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.05□□□□□ -2.08
SNORD28-201ENST00000384706 HPS5Q9UPZ3 1129 aa2.05□□□□□ -2.08
SNORD28-201ENST00000384706 V9GY48 417 aaPredicted RBP2.05□□□□□ -2.08
SNORD28-201ENST00000384706 ONECUT3O60422 494 aaPredicted RBP2.04□□□□□ -2.08
SNORD28-201ENST00000384706 WFS1O76024 890 aa2.04□□□□□ -2.08
SNORD28-201ENST00000384706 NFX1Q12986 1120 aaKnown RBP2.04□□□□□ -2.08
SNORD28-201ENST00000384706 FAM98CQ17RN3 349 aaKnown RBP2.04□□□□□ -2.08
SNORD28-201ENST00000384706 PACS2Q86VP3 889 aa2.04□□□□□ -2.08
SNORD28-201ENST00000384706 LRCH3Q96II8 777 aa2.04□□□□□ -2.08
SNORD28-201ENST00000384706 EPAS1Q99814 870 aa2.04□□□□□ -2.08
SNORD28-201ENST00000384706 TSR3Q9UJK0 312 aaKnown RBP2.04□□□□□ -2.08
SNORD28-201ENST00000384706 SMAPO00193 183 aa2.03□□□□□ -2.08
SNORD28-201ENST00000384706 MAP3K7O43318 606 aa2.03□□□□□ -2.08
SNORD28-201ENST00000384706 MYT1Q01538 1121 aa2.03□□□□□ -2.08
SNORD28-201ENST00000384706 NBR1Q14596 966 aa2.03□□□□□ -2.08
SNORD28-201ENST00000384706 TSR1Q2NL82 804 aaKnown RBP2.03□□□□□ -2.08
SNORD28-201ENST00000384706 LCE2CQ5TA81 110 aa2.03□□□□□ -2.08
SNORD28-201ENST00000384706 PRKD2Q9BZL6 878 aa2.03□□□□□ -2.08
SNORD28-201ENST00000384706 TSKSQ9UJT2 592 aa2.03□□□□□ -2.08
SNORD28-201ENST00000384706 RNF40O75150 1001 aa2.02□□□□□ -2.09
SNORD28-201ENST00000384706 LORP23490 312 aaPredicted RBP2.02□□□□□ -2.09
SNORD28-201ENST00000384706 HDGFP51858 240 aaKnown RBP2.02□□□□□ -2.09
SNORD28-201ENST00000384706 CAMK2BQ13554 666 aa2.02□□□□□ -2.09
SNORD28-201ENST00000384706 TJAP1Q5JTD0 557 aa2.02□□□□□ -2.09
SNORD28-201ENST00000384706 PPP1R18Q6NYC8 613 aa2.02□□□□□ -2.09
SNORD28-201ENST00000384706 SAMD7Q7Z3H4 446 aa2.02□□□□□ -2.09
SNORD28-201ENST00000384706 CDCA7LQ96GN5 454 aa2.02□□□□□ -2.09
SNORD28-201ENST00000384706 PSMG3-AS1Q96PY0 264 aa2.02□□□□□ -2.09
SNORD28-201ENST00000384706 PDZRN3Q9UPQ7 1066 aa2.02□□□□□ -2.09
SNORD28-201ENST00000384706 KRTAP4-8A0A0G2JLE6 195 aa2.01□□□□□ -2.09
SNORD28-201ENST00000384706 GRXCR2A6NFK2 248 aa2.01□□□□□ -2.09
SNORD28-201ENST00000384706 C3orf80F5H4A9 247 aa2.01□□□□□ -2.09
SNORD28-201ENST00000384706 EN1Q05925 392 aaPredicted RBP2.01□□□□□ -2.09
SNORD28-201ENST00000384706 ZNF516Q92618 1163 aa2.01□□□□□ -2.09
SNORD28-201ENST00000384706 TATDN2Q93075 761 aa2.01□□□□□ -2.09
SNORD28-201ENST00000384706 MTRQ99707 1265 aa2.01□□□□□ -2.09
SNORD28-201ENST00000384706 KRTAP9-9Q9BYP9 154 aa2.01□□□□□ -2.09
SNORD28-201ENST00000384706 KRTAP9-4Q9BYQ2 154 aa2.01□□□□□ -2.09
SNORD28-201ENST00000384706 PNMA3Q9UL41 463 aa2.01□□□□□ -2.09
SNORD28-201ENST00000384706 DGAT1O75907 488 aa2□□□□□ -2.09
SNORD28-201ENST00000384706 PRSS12P56730 875 aa2□□□□□ -2.09
SNORD28-201ENST00000384706 COPS2P61201 443 aa2□□□□□ -2.09
SNORD28-201ENST00000384706 TRIM67Q6ZTA4 783 aa2□□□□□ -2.09
SNORD28-201ENST00000384706 NUDT18Q6ZVK8 323 aa2□□□□□ -2.09
SNORD28-201ENST00000384706 NKX2-3Q8TAU0 364 aa2□□□□□ -2.09
SNORD28-201ENST00000384706 IL21Q9HBE4 155 aa2□□□□□ -2.09
SNORD28-201ENST00000384706 EIF4ENIF1Q9NRA8 985 aaKnown RBP2□□□□□ -2.09
SNORD28-201ENST00000384706 FAM198AQ9UFP1 575 aa2□□□□□ -2.09
SNORD28-201ENST00000384706 FAM181BA6NEQ2 426 aa1.99□□□□□ -2.09
SNORD28-201ENST00000384706 SPDYE16A6NNV3 312 aaPredicted RBP1.99□□□□□ -2.09
SNORD28-201ENST00000384706 NBPF26B4DH59 902 aa1.99□□□□□ -2.09
SNORD28-201ENST00000384706 PRIM1P49642 420 aaKnown RBP1.99□□□□□ -2.09
SNORD28-201ENST00000384706 APLP1P51693 650 aa1.99□□□□□ -2.09
SNORD28-201ENST00000384706 PDIA6Q15084 440 aa1.99□□□□□ -2.09
SNORD28-201ENST00000384706 E2F4Q16254 413 aa1.99□□□□□ -2.09
SNORD28-201ENST00000384706 LCE3BQ5TA77 95 aa1.99□□□□□ -2.09
SNORD28-201ENST00000384706 CERKQ8TCT0 537 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms