RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 BCL11BQ9C0K0 894 aaPredicted RBP7.24□□□□□ -1.25
RFX3-204ENST00000382004 IPO7O95373 1038 aaKnown RBP7.24□□□□□ -1.25
RFX3-204ENST00000382004 MAP7D2Q96T17 732 aa7.24□□□□□ -1.25
RFX3-204ENST00000382004 RILPL2Q969X0 211 aa7.24□□□□□ -1.25
RFX3-204ENST00000382004 RUFY1Q96T51 708 aa7.24□□□□□ -1.25
RFX3-204ENST00000382004 HOMER1Q86YM7 354 aa7.23□□□□□ -1.25
RFX3-204ENST00000382004 CLUAP1Q96AJ1 413 aa7.23□□□□□ -1.25
RFX3-204ENST00000382004 NAP1L1P55209 391 aaKnown RBP7.23□□□□□ -1.25
RFX3-204ENST00000382004 TRIM34Q9BYJ4 488 aa7.23□□□□□ -1.25
RFX3-204ENST00000382004 KANK1Q14678 1352 aa7.23□□□□□ -1.25
RFX3-204ENST00000382004 DDX49Q9Y6V7 483 aaKnown RBP7.23□□□□□ -1.25
RFX3-204ENST00000382004 KTN1Q86UP2 1357 aaKnown RBP7.22□□□□□ -1.25
RFX3-204ENST00000382004 FBXW7Q969H0 707 aa7.22□□□□□ -1.25
RFX3-204ENST00000382004 DDX11L8A8MPP1 907 aa7.22□□□□□ -1.25
RFX3-204ENST00000382004 ODF2Q5BJF6 829 aa7.22□□□□□ -1.25
RFX3-204ENST00000382004 RSPH6AQ9H0K4 717 aa7.22□□□□□ -1.25
RFX3-204ENST00000382004 SYNE3Q6ZMZ3 975 aa7.22□□□□□ -1.25
RFX3-204ENST00000382004 CT47A1Q5JQC4 288 aaPredicted RBP7.22□□□□□ -1.25
RFX3-204ENST00000382004 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.22□□□□□ -1.25
RFX3-204ENST00000382004 AK7Q96M32 723 aa7.22□□□□□ -1.25
RFX3-204ENST00000382004 IPO9Q96P70 1041 aaKnown RBP7.22□□□□□ -1.25
RFX3-204ENST00000382004 HDAC5Q9UQL6 1122 aa7.22□□□□□ -1.25
RFX3-204ENST00000382004 LTV1Q96GA3 475 aaPredicted RBP7.21□□□□□ -1.25
RFX3-204ENST00000382004 PLCD4Q9BRC7 762 aa7.21□□□□□ -1.25
RFX3-204ENST00000382004 FAM13BQ9NYF5 915 aa7.21□□□□□ -1.25
RFX3-204ENST00000382004 ANKRD20A12PQ8NF67 263 aa7.21□□□□□ -1.26
RFX3-204ENST00000382004 ZFYVE27Q5T4F4 411 aa7.21□□□□□ -1.26
RFX3-204ENST00000382004 CCDC47Q96A33 483 aaKnown RBP7.21□□□□□ -1.26
RFX3-204ENST00000382004 TIMELESSQ9UNS1 1208 aa7.21□□□□□ -1.26
RFX3-204ENST00000382004 DHX16O60231 1041 aaKnown RBP7.21□□□□□ -1.26
RFX3-204ENST00000382004 MSH5O43196 834 aa7.21□□□□□ -1.26
RFX3-204ENST00000382004 TRIM29Q14134 588 aa7.21□□□□□ -1.26
RFX3-204ENST00000382004 SAMD1Q6SPF0 538 aaPredicted RBP7.21□□□□□ -1.26
RFX3-204ENST00000382004 CCDC146Q8IYE0 955 aa7.2□□□□□ -1.26
RFX3-204ENST00000382004 CWC22Q9HCG8 908 aaKnown RBP7.2□□□□□ -1.26
RFX3-204ENST00000382004 SKIDA1Q1XH10 827 aa7.2□□□□□ -1.26
RFX3-204ENST00000382004 CHMP4AQ9BY43 222 aa7.2□□□□□ -1.26
RFX3-204ENST00000382004 CDR1P51861 262 aa7.2□□□□□ -1.26
RFX3-204ENST00000382004 NOM1Q5C9Z4 860 aaKnown RBP7.2□□□□□ -1.26
RFX3-204ENST00000382004 CCDC43Q96MW1 224 aaKnown RBP7.2□□□□□ -1.26
RFX3-204ENST00000382004 SCRIBQ14160 1630 aa7.2□□□□□ -1.26
RFX3-204ENST00000382004 HSP90AB2PQ58FF8 381 aa7.19□□□□□ -1.26
RFX3-204ENST00000382004 NOL10Q9BSC4 688 aaKnown RBP7.19□□□□□ -1.26
RFX3-204ENST00000382004 CCDC191Q8NCU4 936 aa7.19□□□□□ -1.26
RFX3-204ENST00000382004 AMOTL1Q8IY63 956 aa7.19□□□□□ -1.26
RFX3-204ENST00000382004 ATP6V1DQ9Y5K8 247 aa7.19□□□□□ -1.26
RFX3-204ENST00000382004 FOSBP53539 338 aa7.19□□□□□ -1.26
RFX3-204ENST00000382004 SLC4A3P48751 1232 aa7.18□□□□□ -1.26
RFX3-204ENST00000382004 APPP05067 770 aa7.18□□□□□ -1.26
RFX3-204ENST00000382004 GGT6Q6P531 493 aa7.18□□□□□ -1.26
RFX3-204ENST00000382004 H0YHG0 523 aa7.18□□□□□ -1.26
RFX3-204ENST00000382004 PAF1Q8N7H5 531 aa7.18□□□□□ -1.26
RFX3-204ENST00000382004 BICD2Q8TD16 824 aa7.18□□□□□ -1.26
RFX3-204ENST00000382004 ANKRD45Q5TZF3 282 aa7.17□□□□□ -1.26
RFX3-204ENST00000382004 NGEFQ8N5V2 710 aa7.17□□□□□ -1.26
RFX3-204ENST00000382004 HSPA5P11021 654 aaKnown RBP7.17□□□□□ -1.26
RFX3-204ENST00000382004 CPLX2Q6PUV4 134 aaKnown RBP7.17□□□□□ -1.26
RFX3-204ENST00000382004 HOOK1Q9UJC3 728 aaKnown RBP7.17□□□□□ -1.26
RFX3-204ENST00000382004 AMPHP49418 695 aa7.17□□□□□ -1.26
RFX3-204ENST00000382004 MNS1Q8NEH6 495 aa7.17□□□□□ -1.26
RFX3-204ENST00000382004 ACBD3Q9H3P7 528 aa7.17□□□□□ -1.26
RFX3-204ENST00000382004 RDXP35241 583 aaKnown RBP7.17□□□□□ -1.26
RFX3-204ENST00000382004 EPS15P42566 896 aa7.16□□□□□ -1.26
RFX3-204ENST00000382004 CENPJQ9HC77 1338 aaPredicted RBP7.16□□□□□ -1.26
RFX3-204ENST00000382004 SKOR2Q2VWA4 1001 aaPredicted RBP7.16□□□□□ -1.26
RFX3-204ENST00000382004 HSP90B2PQ58FF3 399 aa7.16□□□□□ -1.26
RFX3-204ENST00000382004 TTLL5Q6EMB2 1281 aa7.16□□□□□ -1.26
RFX3-204ENST00000382004 R3HCC1Q9Y3T6 440 aaKnown RBP7.16□□□□□ -1.26
RFX3-204ENST00000382004 CHMP4CQ96CF2 233 aa7.16□□□□□ -1.26
RFX3-204ENST00000382004 ANO2Q9NQ90 1003 aa7.16□□□□□ -1.26
RFX3-204ENST00000382004 CPLX1O14810 134 aa7.16□□□□□ -1.26
RFX3-204ENST00000382004 DCTN1Q14203 1278 aa7.16□□□□□ -1.26
RFX3-204ENST00000382004 CAGE1Q8TC20 777 aa7.16□□□□□ -1.26
RFX3-204ENST00000382004 DIAPH3Q9NSV4 1193 aa7.16□□□□□ -1.26
RFX3-204ENST00000382004 NFXL1Q6ZNB6 911 aa7.16□□□□□ -1.26
RFX3-204ENST00000382004 NGDNQ8NEJ9 315 aaKnown RBP7.16□□□□□ -1.26
RFX3-204ENST00000382004 IFT57Q9NWB7 429 aa7.16□□□□□ -1.26
RFX3-204ENST00000382004 CCER2I3L3R5 266 aa7.16□□□□□ -1.26
RFX3-204ENST00000382004 ROCK2O75116 1388 aaKnown RBP7.15□□□□□ -1.26
RFX3-204ENST00000382004 VPS37DQ86XT2 251 aa7.15□□□□□ -1.26
RFX3-204ENST00000382004 DHX37Q8IY37 1157 aaKnown RBP7.15□□□□□ -1.26
RFX3-204ENST00000382004 ARGLU1Q9NWB6 273 aaPredicted RBP7.15□□□□□ -1.26
RFX3-204ENST00000382004 CCDC173Q0VFZ6 552 aa7.15□□□□□ -1.26
RFX3-204ENST00000382004 NUTM2FA1L443 756 aa7.15□□□□□ -1.26
RFX3-204ENST00000382004 HSP90AB3PQ58FF7 597 aa7.15□□□□□ -1.27
RFX3-204ENST00000382004 SASS6Q6UVJ0 657 aa7.15□□□□□ -1.27
RFX3-204ENST00000382004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.15□□□□□ -1.278e-7■■■□□ 18.5
RFX3-204ENST00000382004 PDILTQ8N807 584 aa7.15□□□□□ -1.27
RFX3-204ENST00000382004 OFD1O75665 1012 aa7.15□□□□□ -1.27
RFX3-204ENST00000382004 NEFHP12036 1026 aa7.14□□□□□ -1.27
RFX3-204ENST00000382004 FOXD1Q16676 465 aa7.14□□□□□ -1.27
RFX3-204ENST00000382004 CCNB3Q8WWL7 1395 aa7.14□□□□□ -1.27
RFX3-204ENST00000382004 GSE1Q14687 1217 aa7.14□□□□□ -1.27
RFX3-204ENST00000382004 ELL2O00472 640 aaPredicted RBP7.14□□□□□ -1.27
RFX3-204ENST00000382004 LRRFIP1Q32MZ4 808 aaKnown RBP7.14□□□□□ -1.27
RFX3-204ENST00000382004 CEP162Q5TB80 1403 aa7.14□□□□□ -1.27
RFX3-204ENST00000382004 LMOD3Q0VAK6 560 aa7.14□□□□□ -1.27
RFX3-204ENST00000382004 RRP7AQ9Y3A4 280 aaKnown RBP7.14□□□□□ -1.27
RFX3-204ENST00000382004 TSPYL1Q9H0U9 437 aa7.13□□□□□ -1.27
RFX3-204ENST00000382004 TRDNQ13061 729 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms