RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
SNPH-202ENST00000381873 ZNF330Q9Y3S2 320 aaPredicted RBP18.88■□□□□ 0.61
SNPH-202ENST00000381873 CCDC144AA2RUR9 1427 aa18.87■□□□□ 0.61
SNPH-202ENST00000381873 EHBP1L1Q8N3D4 1523 aa18.87■□□□□ 0.61
SNPH-202ENST00000381873 L3MBTL2Q969R5 705 aa18.87■□□□□ 0.61
SNPH-202ENST00000381873 NCOA2Q15596 1464 aa18.86■□□□□ 0.61
SNPH-202ENST00000381873 NGDNQ8NEJ9 315 aaKnown RBP18.86■□□□□ 0.61
SNPH-202ENST00000381873 HECW1Q76N89 1606 aa18.86■□□□□ 0.61
SNPH-202ENST00000381873 PLEKHH2Q8IVE3 1493 aa18.86■□□□□ 0.61
SNPH-202ENST00000381873 KIAA1211Q6ZU35 1233 aa18.85■□□□□ 0.61
SNPH-202ENST00000381873 STK31Q9BXU1 1019 aa18.85■□□□□ 0.61
SNPH-202ENST00000381873 RCAN3Q9UKA8 241 aa18.85■□□□□ 0.61
SNPH-202ENST00000381873 ARAP1Q96P48 1450 aa18.85■□□□□ 0.61
SNPH-202ENST00000381873 GOLGA6L6A8MZA4 724 aa18.85■□□□□ 0.61
SNPH-202ENST00000381873 MAGI1Q96QZ7 1491 aaPredicted RBP18.85■□□□□ 0.61
SNPH-202ENST00000381873 CYB5RLQ6IPT4 315 aa18.84■□□□□ 0.61
SNPH-202ENST00000381873 RWDD1Q9H446 243 aaPredicted RBP18.83■□□□□ 0.61
SNPH-202ENST00000381873 MIA2Q96PC5 1412 aa18.83■□□□□ 0.61
SNPH-202ENST00000381873 ISY1Q9ULR0 285 aaKnown RBP18.82■□□□□ 0.6
SNPH-202ENST00000381873 HDAC5Q9UQL6 1122 aa18.82■□□□□ 0.6
SNPH-202ENST00000381873 ITPRIPQ8IWB1 547 aa18.82■□□□□ 0.6
SNPH-202ENST00000381873 BIVM-ERCC5R4GMW8 1640 aa18.81■□□□□ 0.6
SNPH-202ENST00000381873 NUTM2DQ5VT03 806 aaPredicted RBP18.8■□□□□ 0.6
SNPH-202ENST00000381873 NLRP13Q86W25 1043 aa18.8■□□□□ 0.6
SNPH-202ENST00000381873 CCDC9Q9Y3X0 531 aaKnown RBP18.8■□□□□ 0.6
SNPH-202ENST00000381873 AMPHP49418 695 aa18.78■□□□□ 0.6
SNPH-202ENST00000381873 TROQ12816 1431 aaPredicted RBP18.78■□□□□ 0.6
SNPH-202ENST00000381873 RRBP1Q9P2E9 1410 aaKnown RBP18.78■□□□□ 0.6
SNPH-202ENST00000381873 PHLDB1Q86UU1 1377 aa18.78■□□□□ 0.6
SNPH-202ENST00000381873 IQGAP2Q13576 1575 aa18.77■□□□□ 0.6
SNPH-202ENST00000381873 KIF15Q9NS87 1388 aa18.77■□□□□ 0.6
SNPH-202ENST00000381873 TRAK1Q9UPV9 953 aa18.76■□□□□ 0.59
SNPH-202ENST00000381873 SMC4Q9NTJ3 1288 aa18.76■□□□□ 0.59
SNPH-202ENST00000381873 LMOD3Q0VAK6 560 aa18.75■□□□□ 0.59
SNPH-202ENST00000381873 NUTM2FA1L443 756 aa18.75■□□□□ 0.59
SNPH-202ENST00000381873 VGFO15240 615 aaPredicted RBP18.75■□□□□ 0.59
SNPH-202ENST00000381873 GORABQ5T7V8 394 aa18.75■□□□□ 0.59
SNPH-202ENST00000381873 GNL2Q13823 731 aaKnown RBP18.75■□□□□ 0.59
SNPH-202ENST00000381873 HMMRO75330 724 aa18.74■□□□□ 0.59
SNPH-202ENST00000381873 TMX4Q9H1E5 349 aaPredicted RBP18.74■□□□□ 0.59
SNPH-202ENST00000381873 ARHGAP5Q13017 1502 aa18.73■□□□□ 0.59
SNPH-202ENST00000381873 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.73■□□□□ 0.59
SNPH-202ENST00000381873 SPRYD3Q8NCJ5 442 aa18.73■□□□□ 0.59
SNPH-202ENST00000381873 ANKRD50Q9ULJ7 1429 aa18.72■□□□□ 0.59
SNPH-202ENST00000381873 TIAM1Q13009 1591 aa18.72■□□□□ 0.59
SNPH-202ENST00000381873 TAF7LQ5H9L4 462 aa18.72■□□□□ 0.59
SNPH-202ENST00000381873 URB2Q14146 1524 aaKnown RBP18.72■□□□□ 0.59
SNPH-202ENST00000381873 LTV1Q96GA3 475 aaPredicted RBP18.72■□□□□ 0.59
SNPH-202ENST00000381873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.71■□□□□ 0.59
SNPH-202ENST00000381873 PMFBP1Q8TBY8 1022 aa18.71■□□□□ 0.59
SNPH-202ENST00000381873 CHMP3Q9Y3E7 222 aa18.71■□□□□ 0.59
SNPH-202ENST00000381873 FAM69CQ0P6D2 419 aa18.7■□□□□ 0.58
SNPH-202ENST00000381873 PDE3BQ13370 1112 aa18.7■□□□□ 0.58
SNPH-202ENST00000381873 CLUAP1Q96AJ1 413 aa18.7■□□□□ 0.58
SNPH-202ENST00000381873 SLC4A10Q6U841 1118 aa18.69■□□□□ 0.58
SNPH-202ENST00000381873 GRIN2AQ12879 1464 aa18.69■□□□□ 0.58
SNPH-202ENST00000381873 MAP3K1Q13233 1512 aa18.69■□□□□ 0.58
SNPH-202ENST00000381873 TCERG1O14776 1098 aaKnown RBP18.68■□□□□ 0.58
SNPH-202ENST00000381873 ST20-MTHFSA0A0A6YYL1 179 aa18.68■□□□□ 0.58
SNPH-202ENST00000381873 CCDC146Q8IYE0 955 aa18.68■□□□□ 0.58
SNPH-202ENST00000381873 GPATCH3Q96I76 525 aa18.67■□□□□ 0.58
SNPH-202ENST00000381873 NAP1L5Q96NT1 182 aaPredicted RBP18.67■□□□□ 0.58
SNPH-202ENST00000381873 CENPJQ9HC77 1338 aaPredicted RBP18.66■□□□□ 0.58
SNPH-202ENST00000381873 SUPT6HQ7KZ85 1726 aaKnown RBP18.65■□□□□ 0.58
SNPH-202ENST00000381873 CLSTN1O94985 981 aa18.65■□□□□ 0.58
SNPH-202ENST00000381873 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.64■□□□□ 0.58
SNPH-202ENST00000381873 GBP4Q96PP9 640 aa18.64■□□□□ 0.58
SNPH-202ENST00000381873 GTF2E1P29083 439 aaPredicted RBP18.64■□□□□ 0.57
SNPH-202ENST00000381873 TRIM6-TRIM34B2RNG4 842 aa18.63■□□□□ 0.57
SNPH-202ENST00000381873 L1TD1Q5T7N2 865 aaKnown RBP18.63■□□□□ 0.57
SNPH-202ENST00000381873 HTATSF1O43719 755 aaKnown RBP18.63■□□□□ 0.57
SNPH-202ENST00000381873 CHAF1AQ13111 956 aaPredicted RBP18.63■□□□□ 0.57
SNPH-202ENST00000381873 DRC7Q8IY82 874 aa18.63■□□□□ 0.57
SNPH-202ENST00000381873 PANK3Q9H999 370 aa18.62■□□□□ 0.57
SNPH-202ENST00000381873 RBM19Q9Y4C8 960 aaKnown RBP18.62■□□□□ 0.57
SNPH-202ENST00000381873 EPRSP07814 1512 aaKnown RBP18.62■□□□□ 0.57
SNPH-202ENST00000381873 ZNF644Q9H582 1327 aaPredicted RBP18.6■□□□□ 0.57
SNPH-202ENST00000381873 COG3Q96JB2 828 aa18.6■□□□□ 0.57
SNPH-202ENST00000381873 HFM1A2PYH4 1435 aa18.6■□□□□ 0.57
SNPH-202ENST00000381873 EVC2Q86UK5 1308 aa18.59■□□□□ 0.57
SNPH-202ENST00000381873 SLKQ9H2G2 1235 aaPredicted RBP18.59■□□□□ 0.57
SNPH-202ENST00000381873 MSNP26038 577 aaKnown RBP18.59■□□□□ 0.57
SNPH-202ENST00000381873 MFAP1P55081 439 aaKnown RBP18.58■□□□□ 0.57
SNPH-202ENST00000381873 C9orf84Q5VXU9 1444 aa18.58■□□□□ 0.56
SNPH-202ENST00000381873 PTMSP20962 102 aa18.58■□□□□ 0.56
SNPH-202ENST00000381873 CGNL1Q0VF96 1302 aa18.58■□□□□ 0.56
SNPH-202ENST00000381873 MYBBP1AQ9BQG0 1328 aaKnown RBP18.57■□□□□ 0.56
SNPH-202ENST00000381873 G3V3G9 751 aa18.57■□□□□ 0.56
SNPH-202ENST00000381873 DCAF8Q5TAQ9 597 aa18.57■□□□□ 0.56
SNPH-202ENST00000381873 RRP7AQ9Y3A4 280 aaKnown RBP18.57■□□□□ 0.56
SNPH-202ENST00000381873 RTN4Q9NQC3 1192 aaKnown RBP18.57■□□□□ 0.56
SNPH-202ENST00000381873 CCDC34Q96HJ3 373 aa18.56■□□□□ 0.56
SNPH-202ENST00000381873 FRAT2O75474 233 aaPredicted RBP18.56■□□□□ 0.56
SNPH-202ENST00000381873 ELL2O00472 640 aaPredicted RBP18.55■□□□□ 0.56
SNPH-202ENST00000381873 ROCK1Q13464 1354 aa18.55■□□□□ 0.56
SNPH-202ENST00000381873 USP47Q96K76 1375 aa18.55■□□□□ 0.56
SNPH-202ENST00000381873 TEFQ10587 303 aa18.55■□□□□ 0.56
SNPH-202ENST00000381873 MINK1Q8N4C8 1332 aaPredicted RBP18.54■□□□□ 0.56
SNPH-202ENST00000381873 C1orf141Q5JVX7 400 aa18.53■□□□□ 0.56
SNPH-202ENST00000381873 SYAP1Q96A49 352 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms