RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 PLXNC1O60486 1568 aa23.87■■□□□ 1.41
PDX1-201ENST00000381033 SPAG9O60271 1321 aaKnown RBP23.87■■□□□ 1.41
PDX1-201ENST00000381033 CNTLNQ9NXG0 1405 aa23.87■■□□□ 1.41
PDX1-201ENST00000381033 ANP32EQ9BTT0 268 aa23.86■■□□□ 1.41
PDX1-201ENST00000381033 CARD11Q9BXL7 1154 aa23.85■■□□□ 1.41
PDX1-201ENST00000381033 ASXL2Q76L83 1435 aa23.85■■□□□ 1.41
PDX1-201ENST00000381033 UNC13BO14795 1591 aa23.85■■□□□ 1.41
PDX1-201ENST00000381033 BCORL1Q5H9F3 1711 aa23.84■■□□□ 1.41
PDX1-201ENST00000381033 DUOX2Q9NRD8 1548 aa23.84■■□□□ 1.41
PDX1-201ENST00000381033 CCDC144AA2RUR9 1427 aa23.84■■□□□ 1.41
PDX1-201ENST00000381033 MYT1LQ9UL68 1186 aa23.83■■□□□ 1.41
PDX1-201ENST00000381033 FANCAO15360 1455 aa23.82■■□□□ 1.4
PDX1-201ENST00000381033 UHRF1BP1Q6BDS2 1440 aa23.81■■□□□ 1.4
PDX1-201ENST00000381033 KDM5CP41229 1560 aa23.79■■□□□ 1.4
PDX1-201ENST00000381033 ST20-MTHFSA0A0A6YYL1 179 aa23.79■■□□□ 1.4
PDX1-201ENST00000381033 PRKRIP1Q9H875 184 aaPredicted RBP23.79■■□□□ 1.4
PDX1-201ENST00000381033 NBPF1Q3BBV0 1214 aa23.78■■□□□ 1.4
PDX1-201ENST00000381033 ERBINQ96RT1 1412 aa23.78■■□□□ 1.4
PDX1-201ENST00000381033 IQGAP3Q86VI3 1631 aa23.78■■□□□ 1.4
PDX1-201ENST00000381033 RALGAPBQ86X10 1494 aa23.77■■□□□ 1.4
PDX1-201ENST00000381033 SUPT16HQ9Y5B9 1047 aaKnown RBP23.77■■□□□ 1.4
PDX1-201ENST00000381033 SCAPERQ9BY12 1400 aa23.76■■□□□ 1.39
PDX1-201ENST00000381033 ZFYVE16Q7Z3T8 1539 aa23.76■■□□□ 1.39
PDX1-201ENST00000381033 ABCA9Q8IUA7 1624 aa23.74■■□□□ 1.39
PDX1-201ENST00000381033 ADGRL1O94910 1474 aa23.73■■□□□ 1.39
PDX1-201ENST00000381033 ROCK2O75116 1388 aaKnown RBP23.73■■□□□ 1.39
PDX1-201ENST00000381033 NPM1P06748 294 aaKnown RBP eCLIP23.73■■□□□ 1.39
PDX1-201ENST00000381033 MAGI2Q86UL8 1455 aa23.73■■□□□ 1.39
PDX1-201ENST00000381033 PLEKHG5O94827 1062 aa23.72■■□□□ 1.39
PDX1-201ENST00000381033 A2MP01023 1474 aa23.72■■□□□ 1.39
PDX1-201ENST00000381033 ARAP3Q8WWN8 1544 aa23.71■■□□□ 1.39
PDX1-201ENST00000381033 KIF3BO15066 747 aa23.71■■□□□ 1.39
PDX1-201ENST00000381033 HNRNPUQ00839 825 aaKnown RBP eCLIP23.71■■□□□ 1.39
PDX1-201ENST00000381033 POLR1AO95602 1720 aaPredicted RBP23.71■■□□□ 1.39
PDX1-201ENST00000381033 PRAG1Q86YV5 1406 aa23.7■■□□□ 1.38
PDX1-201ENST00000381033 RTEL1-TNFRSF6BF6WH68 1400 aa23.68■■□□□ 1.38
PDX1-201ENST00000381033 FAM9BQ8IZU0 186 aa23.68■■□□□ 1.38
PDX1-201ENST00000381033 ATP7AQ04656 1500 aa23.68■■□□□ 1.38
PDX1-201ENST00000381033 DHX29Q7Z478 1369 aaKnown RBP23.66■■□□□ 1.38
PDX1-201ENST00000381033 MRS2Q9HD23 443 aa23.66■■□□□ 1.38
PDX1-201ENST00000381033 E9PCH4 1651 aa23.64■■□□□ 1.38
PDX1-201ENST00000381033 INO80Q9ULG1 1556 aaPredicted RBP23.63■■□□□ 1.37
PDX1-201ENST00000381033 BCANQ96GW7 911 aa23.62■■□□□ 1.37
PDX1-201ENST00000381033 TRPM1Q7Z4N2 1603 aa23.62■■□□□ 1.37
PDX1-201ENST00000381033 UBE2Q2Q8WVN8 375 aa23.61■■□□□ 1.37
PDX1-201ENST00000381033 ATP10AO60312 1499 aa23.6■■□□□ 1.37
PDX1-201ENST00000381033 CD109Q6YHK3 1445 aa23.6■■□□□ 1.37
PDX1-201ENST00000381033 SENP3-EIF4A1A0A087X0R7 540 aa23.59■■□□□ 1.37
PDX1-201ENST00000381033 FKBP8Q14318 412 aa23.59■■□□□ 1.37
PDX1-201ENST00000381033 KIDINS220Q9ULH0 1771 aa23.56■■□□□ 1.36
PDX1-201ENST00000381033 CYB5RLQ6IPT4 315 aa23.56■■□□□ 1.36
PDX1-201ENST00000381033 RAPGEF3O95398 923 aa23.55■■□□□ 1.36
PDX1-201ENST00000381033 DEPDC5O75140 1603 aa23.54■■□□□ 1.36
PDX1-201ENST00000381033 ARID4BQ4LE39 1312 aaPredicted RBP23.52■■□□□ 1.36
PDX1-201ENST00000381033 UGGT1Q9NYU2 1555 aa23.52■■□□□ 1.36
PDX1-201ENST00000381033 TESK2Q96S53 571 aa23.51■■□□□ 1.35
PDX1-201ENST00000381033 MROH1Q8NDA8 1641 aa23.51■■□□□ 1.35
PDX1-201ENST00000381033 CLTCL1P53675 1640 aa23.51■■□□□ 1.35
PDX1-201ENST00000381033 KANK1Q14678 1352 aa23.51■■□□□ 1.35
PDX1-201ENST00000381033 GPRASP1Q5JY77 1395 aa23.51■■□□□ 1.35
PDX1-201ENST00000381033 ZNF518AQ6AHZ1 1483 aa23.5■■□□□ 1.35
PDX1-201ENST00000381033 GGT6Q6P531 493 aa23.5■■□□□ 1.35
PDX1-201ENST00000381033 PTPRTO14522 1441 aa23.49■■□□□ 1.35
PDX1-201ENST00000381033 DISP3Q9P2K9 1392 aa23.49■■□□□ 1.35
PDX1-201ENST00000381033 SPHKAPQ2M3C7 1700 aa23.49■■□□□ 1.35
PDX1-201ENST00000381033 TRPM2O94759 1503 aa23.49■■□□□ 1.35
PDX1-201ENST00000381033 ANO8Q9HCE9 1232 aaPredicted RBP23.48■■□□□ 1.35
PDX1-201ENST00000381033 VWDEQ8N2E2 1590 aa23.47■■□□□ 1.35
PDX1-201ENST00000381033 TET3O43151 1660 aa23.47■■□□□ 1.35
PDX1-201ENST00000381033 CFAP65Q6ZU64 1925 aaKnown RBP23.46■■□□□ 1.35
PDX1-201ENST00000381033 POGZQ7Z3K3 1410 aa23.45■■□□□ 1.34
PDX1-201ENST00000381033 PRDM15P57071 1507 aaPredicted RBP23.45■■□□□ 1.34
PDX1-201ENST00000381033 IRX6P78412 446 aaPredicted RBP23.43■■□□□ 1.34
PDX1-201ENST00000381033 CEP152O94986 1710 aa23.41■■□□□ 1.34
PDX1-201ENST00000381033 MADDQ8WXG6 1647 aa23.4■■□□□ 1.34
PDX1-201ENST00000381033 FRMPD1Q5SYB0 1578 aa23.4■■□□□ 1.34
PDX1-201ENST00000381033 EIF2AK4Q9P2K8 1649 aaKnown RBP23.39■■□□□ 1.34
PDX1-201ENST00000381033 PPRC1Q5VV67 1664 aaKnown RBP23.38■■□□□ 1.33
PDX1-201ENST00000381033 PER1O15534 1290 aaPredicted RBP23.38■■□□□ 1.33
PDX1-201ENST00000381033 CHGAP10645 457 aaKnown RBP23.38■■□□□ 1.33
PDX1-201ENST00000381033 ADGRF5Q8IZF2 1346 aa23.38■■□□□ 1.33
PDX1-201ENST00000381033 COL17A1Q9UMD9 1497 aaPredicted RBP23.37■■□□□ 1.33
PDX1-201ENST00000381033 CFAP70Q5T0N1 1121 aa23.37■■□□□ 1.33
PDX1-201ENST00000381033 TMC1Q8TDI8 760 aa23.37■■□□□ 1.33
PDX1-201ENST00000381033 NEFLP07196 543 aa23.36■■□□□ 1.33
PDX1-201ENST00000381033 PANK3Q9H999 370 aa23.36■■□□□ 1.33
PDX1-201ENST00000381033 EFCAB6Q5THR3 1501 aa23.35■■□□□ 1.33
PDX1-201ENST00000381033 CC2D1BQ5T0F9 858 aaKnown RBP23.35■■□□□ 1.33
PDX1-201ENST00000381033 PNISRQ8TF01 805 aaKnown RBP23.35■■□□□ 1.33
PDX1-201ENST00000381033 MLH3Q9UHC1 1453 aa23.35■■□□□ 1.33
PDX1-201ENST00000381033 LAMC1P11047 1609 aa23.34■■□□□ 1.33
PDX1-201ENST00000381033 ABCA6Q8N139 1617 aa23.34■■□□□ 1.33
PDX1-201ENST00000381033 RNF17Q9BXT8 1623 aaKnown RBP23.34■■□□□ 1.33
PDX1-201ENST00000381033 TMF1P82094 1093 aa23.34■■□□□ 1.33
PDX1-201ENST00000381033 HECW2Q9P2P5 1572 aa23.33■■□□□ 1.33
PDX1-201ENST00000381033 WASHC2CQ9Y4E1 1318 aa23.33■■□□□ 1.32
PDX1-201ENST00000381033 ZBED9Q6R2W3 1325 aa23.32■■□□□ 1.32
PDX1-201ENST00000381033 PODXL2Q9NZ53 605 aa23.32■■□□□ 1.32
PDX1-201ENST00000381033 NPATQ14207 1427 aa23.32■■□□□ 1.32
PDX1-201ENST00000381033 CFAP74Q9C0B2 1584 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms