RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 AFAP1Q8N556 730 aa25.97■■□□□ 1.75
FOXC1-201ENST00000380874 ANP32AP39687 249 aaKnown RBP25.97■■□□□ 1.75
FOXC1-201ENST00000380874 SPATA31E1Q6ZUB1 1445 aa25.96■■□□□ 1.75
FOXC1-201ENST00000380874 CCDC141Q6ZP82 1450 aa25.94■■□□□ 1.74
FOXC1-201ENST00000380874 KIF3BO15066 747 aa25.94■■□□□ 1.74
FOXC1-201ENST00000380874 RCAN3Q9UKA8 241 aa25.93■■□□□ 1.74
FOXC1-201ENST00000380874 NBR1Q14596 966 aa25.91■■□□□ 1.74
FOXC1-201ENST00000380874 DHX29Q7Z478 1369 aaKnown RBP25.9■■□□□ 1.74
FOXC1-201ENST00000380874 NPM1P06748 294 aaKnown RBP eCLIP25.9■■□□□ 1.74
FOXC1-201ENST00000380874 ADGRL2O95490 1459 aa25.89■■□□□ 1.73
FOXC1-201ENST00000380874 EXOC6Q8TAG9 804 aa25.85■■□□□ 1.73
FOXC1-201ENST00000380874 CDCA7LQ96GN5 454 aa25.85■■□□□ 1.73
FOXC1-201ENST00000380874 PLEKHH2Q8IVE3 1493 aa25.85■■□□□ 1.73
FOXC1-201ENST00000380874 PLIN1O60240 522 aa25.84■■□□□ 1.73
FOXC1-201ENST00000380874 BRD4O60885 1362 aaPredicted RBP25.83■■□□□ 1.72
FOXC1-201ENST00000380874 ABCC10Q5T3U5 1492 aa25.81■■□□□ 1.72
FOXC1-201ENST00000380874 SMG6Q86US8 1419 aaKnown RBP25.81■■□□□ 1.72
FOXC1-201ENST00000380874 MSH5O43196 834 aa25.81■■□□□ 1.72
FOXC1-201ENST00000380874 CDCA8Q53HL2 280 aa25.81■■□□□ 1.72
FOXC1-201ENST00000380874 RALGAPBQ86X10 1494 aa25.81■■□□□ 1.72
FOXC1-201ENST00000380874 TNNT2P45379 298 aaPredicted RBP25.8■■□□□ 1.72
FOXC1-201ENST00000380874 RRP1P56182 461 aaKnown RBP25.79■■□□□ 1.72
FOXC1-201ENST00000380874 SYCP2Q9BX26 1530 aa25.79■■□□□ 1.72
FOXC1-201ENST00000380874 KANK1Q14678 1352 aa25.78■■□□□ 1.72
FOXC1-201ENST00000380874 GGT6Q6P531 493 aa25.78■■□□□ 1.72
FOXC1-201ENST00000380874 ZBTB47Q9UFB7 747 aaPredicted RBP25.77■■□□□ 1.72
FOXC1-201ENST00000380874 RTL5Q5HYW3 569 aaPredicted RBP25.76■■□□□ 1.71
FOXC1-201ENST00000380874 FANCIQ9NVI1 1328 aa25.76■■□□□ 1.71
FOXC1-201ENST00000380874 ADGBQ8N7X0 1667 aa25.76■■□□□ 1.71
FOXC1-201ENST00000380874 ABCA8O94911 1581 aa25.75■■□□□ 1.71
FOXC1-201ENST00000380874 PLPPR3Q6T4P5 718 aa25.75■■□□□ 1.71
FOXC1-201ENST00000380874 FAM135AQ9P2D6 1515 aa25.75■■□□□ 1.71
FOXC1-201ENST00000380874 SHANK2Q9UPX8 1470 aa25.75■■□□□ 1.71
FOXC1-201ENST00000380874 CANXP27824 592 aaKnown RBP25.74■■□□□ 1.71
FOXC1-201ENST00000380874 CCDC146Q8IYE0 955 aa25.74■■□□□ 1.71
FOXC1-201ENST00000380874 DAXXQ9UER7 740 aaPredicted RBP25.73■■□□□ 1.71
FOXC1-201ENST00000380874 NEUROD2Q15784 382 aa25.72■■□□□ 1.71
FOXC1-201ENST00000380874 MBD5Q9P267 1494 aa25.72■■□□□ 1.71
FOXC1-201ENST00000380874 NOP58Q9Y2X3 529 aaKnown RBP25.72■■□□□ 1.71
FOXC1-201ENST00000380874 DISP3Q9P2K9 1392 aa25.71■■□□□ 1.71
FOXC1-201ENST00000380874 UHRF1BP1Q6BDS2 1440 aa25.7■■□□□ 1.71
FOXC1-201ENST00000380874 PDE3BQ13370 1112 aa25.69■■□□□ 1.7
FOXC1-201ENST00000380874 ADAMTS8Q9UP79 889 aa25.69■■□□□ 1.7
FOXC1-201ENST00000380874 PRAG1Q86YV5 1406 aa25.68■■□□□ 1.7
FOXC1-201ENST00000380874 ERBINQ96RT1 1412 aa25.68■■□□□ 1.7
FOXC1-201ENST00000380874 NUTM2DQ5VT03 806 aaPredicted RBP25.68■■□□□ 1.7
FOXC1-201ENST00000380874 CDC42BPAQ5VT25 1732 aa25.66■■□□□ 1.7
FOXC1-201ENST00000380874 CFAP70Q5T0N1 1121 aa25.66■■□□□ 1.7
FOXC1-201ENST00000380874 BCORL1Q5H9F3 1711 aa25.65■■□□□ 1.7
FOXC1-201ENST00000380874 TESK2Q96S53 571 aa25.63■■□□□ 1.69
FOXC1-201ENST00000380874 ARHGEF12Q9NZN5 1544 aa25.63■■□□□ 1.69
FOXC1-201ENST00000380874 SAFB2Q14151 953 aaKnown RBP eCLIP25.63■■□□□ 1.69
FOXC1-201ENST00000380874 TRAK1Q9UPV9 953 aa25.63■■□□□ 1.69
FOXC1-201ENST00000380874 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.62■■□□□ 1.69
FOXC1-201ENST00000380874 CRBNQ96SW2 442 aa25.62■■□□□ 1.69
FOXC1-201ENST00000380874 KDM5CP41229 1560 aa25.62■■□□□ 1.69
FOXC1-201ENST00000380874 SCAPERQ9BY12 1400 aa25.61■■□□□ 1.69
FOXC1-201ENST00000380874 TRAPPC8Q9Y2L5 1435 aa25.6■■□□□ 1.69
FOXC1-201ENST00000380874 SAMD9LQ8IVG5 1584 aa25.6■■□□□ 1.69
FOXC1-201ENST00000380874 ADCY10Q96PN6 1610 aa25.59■■□□□ 1.69
FOXC1-201ENST00000380874 PER1O15534 1290 aaPredicted RBP25.59■■□□□ 1.69
FOXC1-201ENST00000380874 PPP2R1AP30153 589 aa25.59■■□□□ 1.69
FOXC1-201ENST00000380874 A2MP01023 1474 aa25.57■■□□□ 1.68
FOXC1-201ENST00000380874 GOLGA2Q08379 1002 aa25.56■■□□□ 1.68
FOXC1-201ENST00000380874 RGS3P49796 1198 aa25.55■■□□□ 1.68
FOXC1-201ENST00000380874 APAF1O14727 1248 aa25.55■■□□□ 1.68
FOXC1-201ENST00000380874 PLCH2O75038 1416 aa25.54■■□□□ 1.68
FOXC1-201ENST00000380874 EIF3AQ14152 1382 aaKnown RBP25.54■■□□□ 1.68
FOXC1-201ENST00000380874 WASHC2CQ9Y4E1 1318 aa25.53■■□□□ 1.68
FOXC1-201ENST00000380874 MORC1Q86VD1 984 aa25.53■■□□□ 1.68
FOXC1-201ENST00000380874 CROCC2H7BZ55 1655 aa25.53■■□□□ 1.68
FOXC1-201ENST00000380874 SKAP1Q86WV1 359 aa25.52■■□□□ 1.68
FOXC1-201ENST00000380874 LAS1LQ9Y4W2 734 aaKnown RBP25.52■■□□□ 1.68
FOXC1-201ENST00000380874 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.52■■□□□ 1.68
FOXC1-201ENST00000380874 PARD3Q8TEW0 1356 aa25.52■■□□□ 1.68
FOXC1-201ENST00000380874 ARHGEF5Q12774 1597 aa25.52■■□□□ 1.68
FOXC1-201ENST00000380874 TCERG1O14776 1098 aaKnown RBP25.51■■□□□ 1.67
FOXC1-201ENST00000380874 PAK3O75914 559 aaPredicted RBP25.51■■□□□ 1.67
FOXC1-201ENST00000380874 ERCC6L2Q5T890 1561 aa25.51■■□□□ 1.67
FOXC1-201ENST00000380874 IPO9Q96P70 1041 aaKnown RBP25.5■■□□□ 1.67
FOXC1-201ENST00000380874 TTC37Q6PGP7 1564 aa25.5■■□□□ 1.67
FOXC1-201ENST00000380874 TMEM132EQ6IEE7 984 aa25.5■■□□□ 1.67
FOXC1-201ENST00000380874 STK26Q9P289 416 aa25.5■■□□□ 1.67
FOXC1-201ENST00000380874 STAG3Q9UJ98 1225 aa25.5■■□□□ 1.67
FOXC1-201ENST00000380874 FRAT1Q92837 279 aaPredicted RBP25.49■■□□□ 1.67
FOXC1-201ENST00000380874 PLA2R1Q13018 1463 aa25.49■■□□□ 1.67
FOXC1-201ENST00000380874 LRPPRCP42704 1394 aaKnown RBP25.48■■□□□ 1.67
FOXC1-201ENST00000380874 PDE4AP27815 886 aa25.48■■□□□ 1.67
FOXC1-201ENST00000380874 ABCC2Q92887 1545 aa25.47■■□□□ 1.67
FOXC1-201ENST00000380874 DUOX2Q9NRD8 1548 aa25.47■■□□□ 1.67
FOXC1-201ENST00000380874 RRP7AQ9Y3A4 280 aaKnown RBP25.47■■□□□ 1.67
FOXC1-201ENST00000380874 ADGRF5Q8IZF2 1346 aa25.44■■□□□ 1.66
FOXC1-201ENST00000380874 C20orf194Q5TEA3 1177 aa25.44■■□□□ 1.66
FOXC1-201ENST00000380874 TRHP20396 242 aaPredicted RBP25.43■■□□□ 1.66
FOXC1-201ENST00000380874 CYB5RLQ6IPT4 315 aa25.43■■□□□ 1.66
FOXC1-201ENST00000380874 PREX2Q70Z35 1606 aa25.42■■□□□ 1.66
FOXC1-201ENST00000380874 KDM5DQ9BY66 1539 aa25.41■■□□□ 1.66
FOXC1-201ENST00000380874 SLC24A1O60721 1099 aa25.41■■□□□ 1.66
FOXC1-201ENST00000380874 COL17A1Q9UMD9 1497 aaPredicted RBP25.4■■□□□ 1.66
FOXC1-201ENST00000380874 RNF123Q5XPI4 1314 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms