RNA–Protein interactions for RNA: ENST00000380853.1

TTC39B-203, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-203ENST00000380853 WDR7Q9Y4E6 1490 aa11.4□□□□□ -0.59
TTC39B-203ENST00000380853 ILDR1Q86SU0 546 aaPredicted RBP11.39□□□□□ -0.59
TTC39B-203ENST00000380853 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
TTC39B-203ENST00000380853 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
TTC39B-203ENST00000380853 CABP2Q9NPB3 220 aa11.38□□□□□ -0.59
TTC39B-203ENST00000380853 ABCA8O94911 1581 aa11.38□□□□□ -0.59
TTC39B-203ENST00000380853 IFNLR1Q8IU57 520 aaPredicted RBP11.37□□□□□ -0.59
TTC39B-203ENST00000380853 CIZ1Q9ULV3 898 aaPredicted RBP11.37□□□□□ -0.59
TTC39B-203ENST00000380853 HS3ST6Q96QI5 342 aa11.35□□□□□ -0.59
TTC39B-203ENST00000380853 EEA1Q15075 1411 aa11.35□□□□□ -0.59
TTC39B-203ENST00000380853 CFAP43Q8NDM7 1665 aa11.35□□□□□ -0.59
TTC39B-203ENST00000380853 FAM205CA6NFA0 338 aa11.35□□□□□ -0.59
TTC39B-203ENST00000380853 SPOCK2Q92563 424 aa11.35□□□□□ -0.59
TTC39B-203ENST00000380853 KRTAP3-3Q9BYR6 98 aa11.34□□□□□ -0.59
TTC39B-203ENST00000380853 KRTAP3-2Q9BYR7 98 aa11.34□□□□□ -0.59
TTC39B-203ENST00000380853 P3H3Q8IVL6 736 aa11.33□□□□□ -0.6
TTC39B-203ENST00000380853 SAMD9Q5K651 1589 aa11.32□□□□□ -0.6
TTC39B-203ENST00000380853 ARID3CA6NKF2 412 aa11.32□□□□□ -0.6
TTC39B-203ENST00000380853 BOLA1Q9Y3E2 137 aa11.32□□□□□ -0.6
TTC39B-203ENST00000380853 KCNH8Q96L42 1107 aa11.31□□□□□ -0.6
TTC39B-203ENST00000380853 RAPGEF6Q8TEU7 1601 aa11.3□□□□□ -0.6
TTC39B-203ENST00000380853 RANGAP1P46060 587 aaPredicted RBP11.3□□□□□ -0.6
TTC39B-203ENST00000380853 CD109Q6YHK3 1445 aa11.3□□□□□ -0.6
TTC39B-203ENST00000380853 ADGRL1O94910 1474 aa11.29□□□□□ -0.6
TTC39B-203ENST00000380853 MAGI3Q5TCQ9 1506 aa11.28□□□□□ -0.6
TTC39B-203ENST00000380853 G3V3G9 751 aa11.28□□□□□ -0.6
TTC39B-203ENST00000380853 HOXB3P14651 431 aaPredicted RBP11.28□□□□□ -0.6
TTC39B-203ENST00000380853 COL17A1Q9UMD9 1497 aaPredicted RBP11.27□□□□□ -0.61
TTC39B-203ENST00000380853 KDM4FA0A1W2PPD8 638 aa11.27□□□□□ -0.61
TTC39B-203ENST00000380853 KIF21BO75037 1637 aa11.26□□□□□ -0.61
TTC39B-203ENST00000380853 FHOD3Q2V2M9 1422 aa11.25□□□□□ -0.61
TTC39B-203ENST00000380853 EFCAB5A4FU69 1503 aa11.25□□□□□ -0.61
TTC39B-203ENST00000380853 ATP10BO94823 1461 aa11.25□□□□□ -0.61
TTC39B-203ENST00000380853 ABCA9Q8IUA7 1624 aa11.23□□□□□ -0.61
TTC39B-203ENST00000380853 EFCAB3Q8N7B9 438 aa11.22□□□□□ -0.61
TTC39B-203ENST00000380853 NUP153P49790 1475 aaKnown RBP11.21□□□□□ -0.61
TTC39B-203ENST00000380853 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
TTC39B-203ENST00000380853 ARAP3Q8WWN8 1544 aa11.18□□□□□ -0.62
TTC39B-203ENST00000380853 HOXB1P14653 301 aaPredicted RBP11.18□□□□□ -0.62
TTC39B-203ENST00000380853 CFAP74Q9C0B2 1584 aa11.18□□□□□ -0.62
TTC39B-203ENST00000380853 UBTFP17480 764 aaKnown RBP11.17□□□□□ -0.62
TTC39B-203ENST00000380853 PHLDB1Q86UU1 1377 aa11.17□□□□□ -0.62
TTC39B-203ENST00000380853 NEO1Q92859 1461 aa11.17□□□□□ -0.62
TTC39B-203ENST00000380853 DOK7Q18PE1 504 aa11.16□□□□□ -0.62
TTC39B-203ENST00000380853 PLEKHD1A6NEE1 506 aa11.15□□□□□ -0.62
TTC39B-203ENST00000380853 HECW1Q76N89 1606 aa11.15□□□□□ -0.62
TTC39B-203ENST00000380853 ERBB3P21860 1342 aa11.15□□□□□ -0.62
TTC39B-203ENST00000380853 CDK13Q14004 1512 aaKnown RBP11.14□□□□□ -0.63
TTC39B-203ENST00000380853 TMEM92Q6UXU6 159 aa11.13□□□□□ -0.63
TTC39B-203ENST00000380853 TTC37Q6PGP7 1564 aa11.13□□□□□ -0.63
TTC39B-203ENST00000380853 HECW2Q9P2P5 1572 aa11.13□□□□□ -0.63
TTC39B-203ENST00000380853 FRMPD1Q5SYB0 1578 aa11.12□□□□□ -0.63
TTC39B-203ENST00000380853 FMN1Q68DA7 1419 aa11.12□□□□□ -0.63
TTC39B-203ENST00000380853 MICALL2Q8IY33 904 aa11.12□□□□□ -0.63
TTC39B-203ENST00000380853 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
TTC39B-203ENST00000380853 ARHGEF40Q8TER5 1519 aa11.12□□□□□ -0.63
TTC39B-203ENST00000380853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.11□□□□□ -0.63
TTC39B-203ENST00000380853 RAPGEF3O95398 923 aa11.1□□□□□ -0.63
TTC39B-203ENST00000380853 FANCAO15360 1455 aa11.1□□□□□ -0.63
TTC39B-203ENST00000380853 DENND4BO75064 1496 aaPredicted RBP11.1□□□□□ -0.63
TTC39B-203ENST00000380853 ARHGAP35Q9NRY4 1499 aa11.1□□□□□ -0.63
TTC39B-203ENST00000380853 VARS2Q5ST30 1063 aaKnown RBP11.09□□□□□ -0.63
TTC39B-203ENST00000380853 RNF25Q96BH1 459 aaPredicted RBP11.09□□□□□ -0.63
TTC39B-203ENST00000380853 ARID4BQ4LE39 1312 aaPredicted RBP11.09□□□□□ -0.63
TTC39B-203ENST00000380853 AKNAQ7Z591 1439 aa11.09□□□□□ -0.63
TTC39B-203ENST00000380853 RICTORQ6R327 1708 aa11.09□□□□□ -0.63
TTC39B-203ENST00000380853 RIMBP2O15034 1052 aa11.09□□□□□ -0.63
TTC39B-203ENST00000380853 KIF14Q15058 1648 aa11.08□□□□□ -0.64
TTC39B-203ENST00000380853 MYO5CQ9NQX4 1742 aa11.08□□□□□ -0.64
TTC39B-203ENST00000380853 MS4A4AQ96JQ5 239 aa11.08□□□□□ -0.64
TTC39B-203ENST00000380853 BCORL1Q5H9F3 1711 aa11.07□□□□□ -0.64
TTC39B-203ENST00000380853 ZFYVE16Q7Z3T8 1539 aa11.07□□□□□ -0.64
TTC39B-203ENST00000380853 ADAMTSL3P82987 1691 aa11.07□□□□□ -0.64
TTC39B-203ENST00000380853 CDK11AQ9UQ88 783 aaPredicted RBP11.07□□□□□ -0.64
TTC39B-203ENST00000380853 CLIP1P30622 1438 aa11.06□□□□□ -0.64
TTC39B-203ENST00000380853 MADDQ8WXG6 1647 aa11.06□□□□□ -0.64
TTC39B-203ENST00000380853 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.06□□□□□ -0.64
TTC39B-203ENST00000380853 ZFP91Q96JP5 570 aaPredicted RBP11.06□□□□□ -0.64
TTC39B-203ENST00000380853 ZMYM4Q5VZL5 1548 aa11.05□□□□□ -0.64
TTC39B-203ENST00000380853 RIOK3O14730 519 aaKnown RBP11.05□□□□□ -0.64
TTC39B-203ENST00000380853 PHF8Q9UPP1 1060 aa11.05□□□□□ -0.64
TTC39B-203ENST00000380853 RIMS1Q86UR5 1692 aaKnown RBP11.05□□□□□ -0.64
TTC39B-203ENST00000380853 PCF11O94913 1555 aaKnown RBP11.04□□□□□ -0.64
TTC39B-203ENST00000380853 PTPRMP28827 1452 aa11.04□□□□□ -0.64
TTC39B-203ENST00000380853 POGZQ7Z3K3 1410 aa11.04□□□□□ -0.64
TTC39B-203ENST00000380853 ARHGAP5Q13017 1502 aa11.03□□□□□ -0.64
TTC39B-203ENST00000380853 TROQ12816 1431 aaPredicted RBP11.03□□□□□ -0.64
TTC39B-203ENST00000380853 SOX12O15370 315 aa11.03□□□□□ -0.64
TTC39B-203ENST00000380853 CCDC18Q5T9S5 1454 aa11.02□□□□□ -0.65
TTC39B-203ENST00000380853 PLCH2O75038 1416 aa11.02□□□□□ -0.65
TTC39B-203ENST00000380853 SCAPERQ9BY12 1400 aa11.02□□□□□ -0.65
TTC39B-203ENST00000380853 RNF166Q96A37 237 aaPredicted RBP11.02□□□□□ -0.65
TTC39B-203ENST00000380853 MAGI2Q86UL8 1455 aa11.01□□□□□ -0.65
TTC39B-203ENST00000380853 LRRIQ1Q96JM4 1722 aa11.01□□□□□ -0.65
TTC39B-203ENST00000380853 GPR153Q6NV75 609 aa11.01□□□□□ -0.65
TTC39B-203ENST00000380853 ZSWIM6Q9HCJ5 1215 aa11.01□□□□□ -0.65
TTC39B-203ENST00000380853 YEATS2Q9ULM3 1422 aa11□□□□□ -0.65
TTC39B-203ENST00000380853 EFCAB2Q5VUJ9 269 aa11□□□□□ -0.65
TTC39B-203ENST00000380853 FER1L4A9Z1Z3 1794 aa10.99□□□□□ -0.65
TTC39B-203ENST00000380853 VGFO15240 615 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms