RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 DEPDC5O75140 1603 aa30.6■■■□□ 2.49
GMDS-202ENST00000380815 EIF2AK4Q9P2K8 1649 aaKnown RBP30.59■■■□□ 2.49
GMDS-202ENST00000380815 DIP2BQ9P265 1576 aa30.57■■■□□ 2.48
GMDS-202ENST00000380815 HECW2Q9P2P5 1572 aa30.54■■■□□ 2.48
GMDS-202ENST00000380815 ATP10AO60312 1499 aa30.53■■■□□ 2.48
GMDS-202ENST00000380815 FAM69CQ0P6D2 419 aa30.51■■■□□ 2.48
GMDS-202ENST00000380815 PLA2R1Q13018 1463 aa30.51■■■□□ 2.47
GMDS-202ENST00000380815 CCDC144AA2RUR9 1427 aa30.5■■■□□ 2.47
GMDS-202ENST00000380815 VWDEQ8N2E2 1590 aa30.49■■■□□ 2.47
GMDS-202ENST00000380815 A2MP01023 1474 aa30.49■■■□□ 2.47
GMDS-202ENST00000380815 KIF3BO15066 747 aa30.49■■■□□ 2.47
GMDS-202ENST00000380815 NBPF8Q3BBV2 869 aa30.49■■■□□ 2.47
GMDS-202ENST00000380815 KANK1Q14678 1352 aa30.48■■■□□ 2.47
GMDS-202ENST00000380815 PRDM15P57071 1507 aaPredicted RBP30.48■■■□□ 2.47
GMDS-202ENST00000380815 RAPGEF3O95398 923 aa30.44■■■□□ 2.46
GMDS-202ENST00000380815 MROH1Q8NDA8 1641 aa30.44■■■□□ 2.46
GMDS-202ENST00000380815 RICTORQ6R327 1708 aa30.44■■■□□ 2.46
GMDS-202ENST00000380815 TET3O43151 1660 aa30.43■■■□□ 2.46
GMDS-202ENST00000380815 MIER1Q8N108 512 aa30.42■■■□□ 2.46
GMDS-202ENST00000380815 UHRF1BP1Q6BDS2 1440 aa30.42■■■□□ 2.46
GMDS-202ENST00000380815 E9PCH4 1651 aa30.42■■■□□ 2.46
GMDS-202ENST00000380815 HIRIP3Q9BW71 556 aaPredicted RBP30.41■■■□□ 2.46
GMDS-202ENST00000380815 FRMPD1Q5SYB0 1578 aa30.41■■■□□ 2.46
GMDS-202ENST00000380815 ABCA6Q8N139 1617 aa30.4■■■□□ 2.46
GMDS-202ENST00000380815 RNF17Q9BXT8 1623 aaKnown RBP30.39■■■□□ 2.46
GMDS-202ENST00000380815 EIF4G2P78344 907 aaKnown RBP eCLIP30.39■■■□□ 2.46
GMDS-202ENST00000380815 BCORL1Q5H9F3 1711 aa30.37■■■□□ 2.45
GMDS-202ENST00000380815 PPRC1Q5VV67 1664 aaKnown RBP30.36■■■□□ 2.45
GMDS-202ENST00000380815 PTPRTO14522 1441 aa30.35■■■□□ 2.45
GMDS-202ENST00000380815 HSPA5P11021 654 aaKnown RBP30.35■■■□□ 2.45
GMDS-202ENST00000380815 DIP2CQ9Y2E4 1556 aa30.33■■■□□ 2.45
GMDS-202ENST00000380815 TRPM2O94759 1503 aa30.33■■■□□ 2.45
GMDS-202ENST00000380815 LMTK2Q8IWU2 1503 aa30.33■■■□□ 2.45
GMDS-202ENST00000380815 DCAF11Q8TEB1 546 aa30.31■■■□□ 2.44
GMDS-202ENST00000380815 ZMYM4Q5VZL5 1548 aa30.3■■■□□ 2.44
GMDS-202ENST00000380815 SPHKAPQ2M3C7 1700 aa30.29■■■□□ 2.44
GMDS-202ENST00000380815 TSPOAP1O95153 1857 aa30.29■■■□□ 2.44
GMDS-202ENST00000380815 RALGAPBQ86X10 1494 aa30.28■■■□□ 2.44
GMDS-202ENST00000380815 EFCAB6Q5THR3 1501 aa30.28■■■□□ 2.44
GMDS-202ENST00000380815 SPATA31E1Q6ZUB1 1445 aa30.28■■■□□ 2.44
GMDS-202ENST00000380815 DDX10Q13206 875 aaKnown RBP30.27■■■□□ 2.44
GMDS-202ENST00000380815 ZNF326Q5BKZ1 582 aaKnown RBP30.27■■■□□ 2.44
GMDS-202ENST00000380815 KIF13AQ9H1H9 1805 aa30.27■■■□□ 2.44
GMDS-202ENST00000380815 KDM2AQ9Y2K7 1162 aa30.24■■■□□ 2.43
GMDS-202ENST00000380815 YEATS2Q9ULM3 1422 aa30.24■■■□□ 2.43
GMDS-202ENST00000380815 RGL3Q3MIN7 710 aa30.22■■■□□ 2.43
GMDS-202ENST00000380815 PRAG1Q86YV5 1406 aa30.2■■■□□ 2.43
GMDS-202ENST00000380815 CEP152O94986 1710 aa30.2■■■□□ 2.42
GMDS-202ENST00000380815 GGT6Q6P531 493 aa30.19■■■□□ 2.42
GMDS-202ENST00000380815 CLTCL1P53675 1640 aa30.19■■■□□ 2.42
GMDS-202ENST00000380815 ABCC3O15438 1527 aa30.15■■■□□ 2.42
GMDS-202ENST00000380815 USP47Q96K76 1375 aa30.15■■■□□ 2.42
GMDS-202ENST00000380815 WASHC2AQ641Q2 1341 aa30.15■■■□□ 2.42
GMDS-202ENST00000380815 NEURL4Q96JN8 1562 aa30.15■■■□□ 2.42
GMDS-202ENST00000380815 WASHC2CQ9Y4E1 1318 aa30.13■■■□□ 2.41
GMDS-202ENST00000380815 TRPM1Q7Z4N2 1603 aa30.12■■■□□ 2.41
GMDS-202ENST00000380815 STAC3Q96MF2 364 aa30.11■■■□□ 2.41
GMDS-202ENST00000380815 CARD11Q9BXL7 1154 aa30.11■■■□□ 2.41
GMDS-202ENST00000380815 NPATQ14207 1427 aa30.11■■■□□ 2.41
GMDS-202ENST00000380815 REREQ9P2R6 1566 aa30.09■■■□□ 2.41
GMDS-202ENST00000380815 ROCK2O75116 1388 aaKnown RBP30.09■■■□□ 2.41
GMDS-202ENST00000380815 ZC3H13Q5T200 1668 aaKnown RBP30.07■■■□□ 2.4
GMDS-202ENST00000380815 CCDC7Q96M83 1385 aa30.07■■■□□ 2.4
GMDS-202ENST00000380815 CAMSAP1Q5T5Y3 1602 aa30.06■■■□□ 2.4
GMDS-202ENST00000380815 GPRASP1Q5JY77 1395 aa30.06■■■□□ 2.4
GMDS-202ENST00000380815 C11orf95C9JLR9 678 aaPredicted RBP30.05■■■□□ 2.4
GMDS-202ENST00000380815 POLR1AO95602 1720 aaPredicted RBP30.05■■■□□ 2.4
GMDS-202ENST00000380815 CNTLNQ9NXG0 1405 aa30.04■■■□□ 2.4
GMDS-202ENST00000380815 COL17A1Q9UMD9 1497 aaPredicted RBP30.04■■■□□ 2.4
GMDS-202ENST00000380815 UGGT1Q9NYU2 1555 aa30.03■■■□□ 2.4
GMDS-202ENST00000380815 ARHGAP31Q2M1Z3 1444 aa30.03■■■□□ 2.4
GMDS-202ENST00000380815 AGLP35573 1532 aa30.02■■■□□ 2.4
GMDS-202ENST00000380815 LAMC1P11047 1609 aa30.02■■■□□ 2.4
GMDS-202ENST00000380815 KIF1BO60333 1816 aa30■■■□□ 2.39
GMDS-202ENST00000380815 KIF7Q2M1P5 1343 aa29.98■■■□□ 2.39
GMDS-202ENST00000380815 MADDQ8WXG6 1647 aa29.98■■■□□ 2.39
GMDS-202ENST00000380815 NOS1P29475 1434 aa29.98■■■□□ 2.39
GMDS-202ENST00000380815 ARID4BQ4LE39 1312 aaPredicted RBP29.97■■■□□ 2.39
GMDS-202ENST00000380815 NBPF1Q3BBV0 1214 aa29.96■■■□□ 2.39
GMDS-202ENST00000380815 ANP32CO43423 234 aa29.95■■■□□ 2.39
GMDS-202ENST00000380815 ARHGEF40Q8TER5 1519 aa29.95■■■□□ 2.38
GMDS-202ENST00000380815 PPP6R1Q9UPN7 881 aa29.94■■■□□ 2.38
GMDS-202ENST00000380815 ADGRB3O60242 1522 aa29.94■■■□□ 2.38
GMDS-202ENST00000380815 SIGLEC1Q9BZZ2 1709 aa29.92■■■□□ 2.38
GMDS-202ENST00000380815 MYOM2P54296 1465 aa29.92■■■□□ 2.38
GMDS-202ENST00000380815 ST20-MTHFSA0A0A6YYL1 179 aa29.92■■■□□ 2.38
GMDS-202ENST00000380815 CFAP65Q6ZU64 1925 aaKnown RBP29.9■■■□□ 2.38
GMDS-202ENST00000380815 CENPBP07199 599 aaPredicted RBP29.9■■■□□ 2.38
GMDS-202ENST00000380815 MROH2AA6NES4 1674 aa29.89■■■□□ 2.38
GMDS-202ENST00000380815 PIK3C2BO00750 1634 aa29.88■■■□□ 2.37
GMDS-202ENST00000380815 IFT172Q9UG01 1749 aa29.88■■■□□ 2.37
GMDS-202ENST00000380815 SYNMO15061 1565 aa29.87■■■□□ 2.37
GMDS-202ENST00000380815 YTHDC1Q96MU7 727 aaKnown RBP29.87■■■□□ 2.37
GMDS-202ENST00000380815 CCER2I3L3R5 266 aa29.85■■■□□ 2.37
GMDS-202ENST00000380815 KIAA1210Q9ULL0 1709 aa29.84■■■□□ 2.37
GMDS-202ENST00000380815 NRXN1Q9ULB1 1477 aa29.82■■■□□ 2.36
GMDS-202ENST00000380815 RPGRIP1LQ68CZ1 1315 aa29.81■■■□□ 2.36
GMDS-202ENST00000380815 SLC52A1Q9NWF4 448 aa29.8■■■□□ 2.36
GMDS-202ENST00000380815 PREX1Q8TCU6 1659 aa29.8■■■□□ 2.36
GMDS-202ENST00000380815 CHGAP10645 457 aaKnown RBP29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms