RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 DDX10Q13206 875 aaKnown RBP27.2■■□□□ 1.94
GMDS-201ENST00000380805 ATP10AO60312 1499 aa27.2■■□□□ 1.94
GMDS-201ENST00000380805 HIRIP3Q9BW71 556 aaPredicted RBP27.19■■□□□ 1.94
GMDS-201ENST00000380805 ADGRL1O94910 1474 aa27.19■■□□□ 1.94
GMDS-201ENST00000380805 EIF4G2P78344 907 aaKnown RBP eCLIP27.19■■□□□ 1.94
GMDS-201ENST00000380805 SPATA31E1Q6ZUB1 1445 aa27.18■■□□□ 1.94
GMDS-201ENST00000380805 HSPA5P11021 654 aaKnown RBP27.17■■□□□ 1.94
GMDS-201ENST00000380805 SPAG9O60271 1321 aaKnown RBP27.17■■□□□ 1.94
GMDS-201ENST00000380805 EIF2AK4Q9P2K8 1649 aaKnown RBP27.16■■□□□ 1.94
GMDS-201ENST00000380805 PLA2R1Q13018 1463 aa27.13■■□□□ 1.93
GMDS-201ENST00000380805 NEO1Q92859 1461 aa27.13■■□□□ 1.93
GMDS-201ENST00000380805 RALGAPBQ86X10 1494 aa27.12■■□□□ 1.93
GMDS-201ENST00000380805 SCAPERQ9BY12 1400 aa27.12■■□□□ 1.93
GMDS-201ENST00000380805 VWDEQ8N2E2 1590 aa27.1■■□□□ 1.93
GMDS-201ENST00000380805 AFAP1Q8N556 730 aa27.1■■□□□ 1.93
GMDS-201ENST00000380805 KIDINS220Q9ULH0 1771 aa27.08■■□□□ 1.93
GMDS-201ENST00000380805 CCDC144AA2RUR9 1427 aa27.08■■□□□ 1.93
GMDS-201ENST00000380805 COL17A1Q9UMD9 1497 aaPredicted RBP27.08■■□□□ 1.93
GMDS-201ENST00000380805 SCAF1Q9H7N4 1312 aaKnown RBP27.08■■□□□ 1.93
GMDS-201ENST00000380805 KDM5CP41229 1560 aa27.08■■□□□ 1.92
GMDS-201ENST00000380805 YTHDC1Q96MU7 727 aaKnown RBP27.07■■□□□ 1.92
GMDS-201ENST00000380805 WASHC2AQ641Q2 1341 aa27.07■■□□□ 1.92
GMDS-201ENST00000380805 ZNF518AQ6AHZ1 1483 aa27.06■■□□□ 1.92
GMDS-201ENST00000380805 E9PCH4 1651 aa27.06■■□□□ 1.92
GMDS-201ENST00000380805 TET3O43151 1660 aa27.05■■□□□ 1.92
GMDS-201ENST00000380805 PRDM15P57071 1507 aaPredicted RBP27.04■■□□□ 1.92
GMDS-201ENST00000380805 RAPGEF3O95398 923 aa27.02■■□□□ 1.92
GMDS-201ENST00000380805 MROH1Q8NDA8 1641 aa27.02■■□□□ 1.92
GMDS-201ENST00000380805 DHX29Q7Z478 1369 aaKnown RBP27■■□□□ 1.91
GMDS-201ENST00000380805 CCDC7Q96M83 1385 aa27■■□□□ 1.91
GMDS-201ENST00000380805 POGZQ7Z3K3 1410 aa27■■□□□ 1.91
GMDS-201ENST00000380805 CCER2I3L3R5 266 aa26.99■■□□□ 1.91
GMDS-201ENST00000380805 TRPM2O94759 1503 aa26.99■■□□□ 1.91
GMDS-201ENST00000380805 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.99■■□□□ 1.915e-9■□□□□ 9.4
GMDS-201ENST00000380805 TRPM1Q7Z4N2 1603 aa26.98■■□□□ 1.91
GMDS-201ENST00000380805 SPHKAPQ2M3C7 1700 aa26.98■■□□□ 1.91
GMDS-201ENST00000380805 CNTLNQ9NXG0 1405 aa26.97■■□□□ 1.91
GMDS-201ENST00000380805 MLH3Q9UHC1 1453 aa26.97■■□□□ 1.91
GMDS-201ENST00000380805 BCORL1Q5H9F3 1711 aa26.97■■□□□ 1.91
GMDS-201ENST00000380805 RNF17Q9BXT8 1623 aaKnown RBP26.96■■□□□ 1.91
GMDS-201ENST00000380805 ANP32CO43423 234 aa26.96■■□□□ 1.91
GMDS-201ENST00000380805 LAMC1P11047 1609 aa26.96■■□□□ 1.91
GMDS-201ENST00000380805 HECW2Q9P2P5 1572 aa26.95■■□□□ 1.9
GMDS-201ENST00000380805 A2MP01023 1474 aa26.95■■□□□ 1.9
GMDS-201ENST00000380805 PTPRTO14522 1441 aa26.95■■□□□ 1.9
GMDS-201ENST00000380805 USP47Q96K76 1375 aa26.95■■□□□ 1.9
GMDS-201ENST00000380805 PRAG1Q86YV5 1406 aa26.94■■□□□ 1.9
GMDS-201ENST00000380805 CEP152O94986 1710 aa26.94■■□□□ 1.9
GMDS-201ENST00000380805 RICTORQ6R327 1708 aa26.93■■□□□ 1.9
GMDS-201ENST00000380805 FRMPD1Q5SYB0 1578 aa26.93■■□□□ 1.9
GMDS-201ENST00000380805 NEURL4Q96JN8 1562 aa26.92■■□□□ 1.9
GMDS-201ENST00000380805 C11orf95C9JLR9 678 aaPredicted RBP26.91■■□□□ 1.9
GMDS-201ENST00000380805 LMTK2Q8IWU2 1503 aa26.9■■□□□ 1.9
GMDS-201ENST00000380805 KANK1Q14678 1352 aa26.89■■□□□ 1.9
GMDS-201ENST00000380805 ARID4BQ4LE39 1312 aaPredicted RBP26.88■■□□□ 1.89
GMDS-201ENST00000380805 DCAF11Q8TEB1 546 aa26.88■■□□□ 1.89
GMDS-201ENST00000380805 KIF7Q2M1P5 1343 aa26.87■■□□□ 1.89
GMDS-201ENST00000380805 GPRASP1Q5JY77 1395 aa26.87■■□□□ 1.89
GMDS-201ENST00000380805 EFCAB6Q5THR3 1501 aa26.86■■□□□ 1.89
GMDS-201ENST00000380805 CLTCL1P53675 1640 aa26.85■■□□□ 1.89
GMDS-201ENST00000380805 ABCA6Q8N139 1617 aa26.85■■□□□ 1.89
GMDS-201ENST00000380805 ZNF326Q5BKZ1 582 aaKnown RBP26.85■■□□□ 1.89
GMDS-201ENST00000380805 KIF3BO15066 747 aa26.8■■□□□ 1.88
GMDS-201ENST00000380805 CARD11Q9BXL7 1154 aa26.8■■□□□ 1.88
GMDS-201ENST00000380805 MYT1LQ9UL68 1186 aa26.8■■□□□ 1.88
GMDS-201ENST00000380805 GTF3C3Q9Y5Q9 886 aa26.79■■□□□ 1.88
GMDS-201ENST00000380805 ZMYM4Q5VZL5 1548 aa26.79■■□□□ 1.88
GMDS-201ENST00000380805 KDM2AQ9Y2K7 1162 aa26.79■■□□□ 1.88
GMDS-201ENST00000380805 MADDQ8WXG6 1647 aa26.78■■□□□ 1.88
GMDS-201ENST00000380805 ROCK2O75116 1388 aaKnown RBP26.78■■□□□ 1.88
GMDS-201ENST00000380805 YEATS2Q9ULM3 1422 aa26.77■■□□□ 1.88
GMDS-201ENST00000380805 DIP2CQ9Y2E4 1556 aa26.76■■□□□ 1.87
GMDS-201ENST00000380805 STAC3Q96MF2 364 aa26.75■■□□□ 1.87
GMDS-201ENST00000380805 RGL3Q3MIN7 710 aa26.72■■□□□ 1.87
GMDS-201ENST00000380805 KIF1BO60333 1816 aa26.7■■□□□ 1.87
GMDS-201ENST00000380805 KIAA1210Q9ULL0 1709 aa26.7■■□□□ 1.86
GMDS-201ENST00000380805 IFT172Q9UG01 1749 aa26.69■■□□□ 1.86
GMDS-201ENST00000380805 IQGAP1P46940 1657 aa26.66■■□□□ 1.86
GMDS-201ENST00000380805 ABCC3O15438 1527 aa26.66■■□□□ 1.86
GMDS-201ENST00000380805 PRKRIP1Q9H875 184 aaPredicted RBP26.65■■□□□ 1.86
GMDS-201ENST00000380805 ZC3H13Q5T200 1668 aaKnown RBP26.65■■□□□ 1.86
GMDS-201ENST00000380805 ARHGEF40Q8TER5 1519 aa26.65■■□□□ 1.86
GMDS-201ENST00000380805 ST20-MTHFSA0A0A6YYL1 179 aa26.65■■□□□ 1.86
GMDS-201ENST00000380805 MYOM2P54296 1465 aa26.64■■□□□ 1.86
GMDS-201ENST00000380805 CAMSAP1Q5T5Y3 1602 aa26.63■■□□□ 1.85
GMDS-201ENST00000380805 NBPF1Q3BBV0 1214 aa26.62■■□□□ 1.85
GMDS-201ENST00000380805 MROH2AA6NES4 1674 aa26.61■■□□□ 1.85
GMDS-201ENST00000380805 NPATQ14207 1427 aa26.61■■□□□ 1.85
GMDS-201ENST00000380805 ADGRB3O60242 1522 aa26.6■■□□□ 1.85
GMDS-201ENST00000380805 UGGT1Q9NYU2 1555 aa26.6■■□□□ 1.85
GMDS-201ENST00000380805 SIGLEC1Q9BZZ2 1709 aa26.58■■□□□ 1.85
GMDS-201ENST00000380805 REREQ9P2R6 1566 aa26.55■■□□□ 1.84
GMDS-201ENST00000380805 NRXN1Q9ULB1 1477 aa26.55■■□□□ 1.84
GMDS-201ENST00000380805 ARHGAP31Q2M1Z3 1444 aa26.54■■□□□ 1.84
GMDS-201ENST00000380805 PIK3C2BO00750 1634 aa26.54■■□□□ 1.84
GMDS-201ENST00000380805 TESK2Q96S53 571 aa26.52■■□□□ 1.84
GMDS-201ENST00000380805 NOS1P29475 1434 aa26.52■■□□□ 1.84
GMDS-201ENST00000380805 PPLO60437 1756 aa26.5■■□□□ 1.83
GMDS-201ENST00000380805 SCAF11Q99590 1463 aaKnown RBP26.5■■□□□ 1.83
GMDS-201ENST00000380805 KTN1Q86UP2 1357 aaKnown RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms