RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 RSPH4AQ5TD94 716 aa11.12□□□□□ -0.63
PDLIM5-204ENST00000380176 ARHGEF12Q9NZN5 1544 aa11.11□□□□□ -0.63
PDLIM5-204ENST00000380176 POLR1AO95602 1720 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-204ENST00000380176 CNTLNQ9NXG0 1405 aa11.11□□□□□ -0.63
PDLIM5-204ENST00000380176 FAM135AQ9P2D6 1515 aa11.1□□□□□ -0.63
PDLIM5-204ENST00000380176 MAST1Q9Y2H9 1570 aa11.1□□□□□ -0.63
PDLIM5-204ENST00000380176 ARXQ96QS3 562 aa11.1□□□□□ -0.63
PDLIM5-204ENST00000380176 KIF7Q2M1P5 1343 aa11.1□□□□□ -0.63
PDLIM5-204ENST00000380176 UHRF1BP1LA0JNW5 1464 aa11.09□□□□□ -0.63
PDLIM5-204ENST00000380176 BCORL1Q5H9F3 1711 aa11.09□□□□□ -0.63
PDLIM5-204ENST00000380176 PLCH2O75038 1416 aa11.08□□□□□ -0.64
PDLIM5-204ENST00000380176 CCDC184Q52MB2 194 aa11.08□□□□□ -0.64
PDLIM5-204ENST00000380176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.07□□□□□ -0.642e-6■□□□□ 11
PDLIM5-204ENST00000380176 PLEKHH2Q8IVE3 1493 aa11.07□□□□□ -0.64
PDLIM5-204ENST00000380176 KDM2AQ9Y2K7 1162 aa11.07□□□□□ -0.64
PDLIM5-204ENST00000380176 KDM5CP41229 1560 aa11.07□□□□□ -0.64
PDLIM5-204ENST00000380176 USP47Q96K76 1375 aa11.07□□□□□ -0.64
PDLIM5-204ENST00000380176 UNC13BO14795 1591 aa11.07□□□□□ -0.64
PDLIM5-204ENST00000380176 PLXNC1O60486 1568 aa11.07□□□□□ -0.64
PDLIM5-204ENST00000380176 UHRF1BP1Q6BDS2 1440 aa11.06□□□□□ -0.64
PDLIM5-204ENST00000380176 DCAF11Q8TEB1 546 aa11.05□□□□□ -0.64
PDLIM5-204ENST00000380176 PRKRIP1Q9H875 184 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-204ENST00000380176 TRAPPC8Q9Y2L5 1435 aa11.05□□□□□ -0.64
PDLIM5-204ENST00000380176 EFCAB2Q5VUJ9 269 aa11.05□□□□□ -0.64
PDLIM5-204ENST00000380176 ABCC1P33527 1531 aa11.04□□□□□ -0.64
PDLIM5-204ENST00000380176 RALGAPBQ86X10 1494 aa11.04□□□□□ -0.64
PDLIM5-204ENST00000380176 PLA2R1Q13018 1463 aa11.04□□□□□ -0.64
PDLIM5-204ENST00000380176 IQGAP3Q86VI3 1631 aa11.03□□□□□ -0.64
PDLIM5-204ENST00000380176 DUOX2Q9NRD8 1548 aa11.03□□□□□ -0.64
PDLIM5-204ENST00000380176 POLR3GLQ9BT43 218 aa11.03□□□□□ -0.64
PDLIM5-204ENST00000380176 CARD11Q9BXL7 1154 aa11.03□□□□□ -0.64
PDLIM5-204ENST00000380176 HNRNPUQ00839 825 aaKnown RBP eCLIP11.02□□□□□ -0.65
PDLIM5-204ENST00000380176 CCDC144AA2RUR9 1427 aa11.01□□□□□ -0.65
PDLIM5-204ENST00000380176 RGL3Q3MIN7 710 aa11.01□□□□□ -0.65
PDLIM5-204ENST00000380176 AFAP1Q8N556 730 aa11.01□□□□□ -0.65
PDLIM5-204ENST00000380176 MSH5O43196 834 aa11□□□□□ -0.65
PDLIM5-204ENST00000380176 ERBINQ96RT1 1412 aa11□□□□□ -0.65
PDLIM5-204ENST00000380176 MAGI2Q86UL8 1455 aa11□□□□□ -0.65
PDLIM5-204ENST00000380176 CNGB1Q14028 1251 aaPredicted RBP11□□□□□ -0.65
PDLIM5-204ENST00000380176 WDR7Q9Y4E6 1490 aa11□□□□□ -0.65
PDLIM5-204ENST00000380176 DHX29Q7Z478 1369 aaKnown RBP10.99□□□□□ -0.65
PDLIM5-204ENST00000380176 ST20-MTHFSA0A0A6YYL1 179 aa10.99□□□□□ -0.65
PDLIM5-204ENST00000380176 TRPM1Q7Z4N2 1603 aa10.99□□□□□ -0.65
PDLIM5-204ENST00000380176 A2MP01023 1474 aa10.98□□□□□ -0.65
PDLIM5-204ENST00000380176 PRAG1Q86YV5 1406 aa10.98□□□□□ -0.65
PDLIM5-204ENST00000380176 SPAG9O60271 1321 aaKnown RBP10.98□□□□□ -0.65
PDLIM5-204ENST00000380176 FAM9BQ8IZU0 186 aa10.98□□□□□ -0.65
PDLIM5-204ENST00000380176 MRS2Q9HD23 443 aa10.98□□□□□ -0.65
PDLIM5-204ENST00000380176 ROCK2O75116 1388 aaKnown RBP10.97□□□□□ -0.65
PDLIM5-204ENST00000380176 ZFYVE16Q7Z3T8 1539 aa10.97□□□□□ -0.65
PDLIM5-204ENST00000380176 ARAP3Q8WWN8 1544 aa10.97□□□□□ -0.65
PDLIM5-204ENST00000380176 NBPF1Q3BBV0 1214 aa10.97□□□□□ -0.65
PDLIM5-204ENST00000380176 ABCA9Q8IUA7 1624 aa10.97□□□□□ -0.65
PDLIM5-204ENST00000380176 FANCAO15360 1455 aa10.96□□□□□ -0.65
PDLIM5-204ENST00000380176 ARID4BQ4LE39 1312 aaPredicted RBP10.95□□□□□ -0.66
PDLIM5-204ENST00000380176 E9PCH4 1651 aa10.95□□□□□ -0.66
PDLIM5-204ENST00000380176 ATP10AO60312 1499 aa10.95□□□□□ -0.66
PDLIM5-204ENST00000380176 RTEL1-TNFRSF6BF6WH68 1400 aa10.95□□□□□ -0.66
PDLIM5-204ENST00000380176 ASXL2Q76L83 1435 aa10.94□□□□□ -0.66
PDLIM5-204ENST00000380176 INO80Q9ULG1 1556 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-204ENST00000380176 ATP7AQ04656 1500 aa10.93□□□□□ -0.66
PDLIM5-204ENST00000380176 ADGRL1O94910 1474 aa10.92□□□□□ -0.66
PDLIM5-204ENST00000380176 SCAPERQ9BY12 1400 aa10.92□□□□□ -0.66
PDLIM5-204ENST00000380176 DEPDC5O75140 1603 aa10.92□□□□□ -0.66
PDLIM5-204ENST00000380176 OSCARQ8IYS5 282 aa10.91□□□□□ -0.66
PDLIM5-204ENST00000380176 SLC4A2P04920 1241 aa10.91□□□□□ -0.66
PDLIM5-204ENST00000380176 NEFLP07196 543 aa10.91□□□□□ -0.66
PDLIM5-204ENST00000380176 GPRASP1Q5JY77 1395 aa10.9□□□□□ -0.66
PDLIM5-204ENST00000380176 MYT1LQ9UL68 1186 aa10.9□□□□□ -0.66
PDLIM5-204ENST00000380176 SPHKAPQ2M3C7 1700 aa10.9□□□□□ -0.66
PDLIM5-204ENST00000380176 PRDM15P57071 1507 aaPredicted RBP10.9□□□□□ -0.67
PDLIM5-204ENST00000380176 KIF3BO15066 747 aa10.89□□□□□ -0.67
PDLIM5-204ENST00000380176 LAMC1P11047 1609 aa10.89□□□□□ -0.67
PDLIM5-204ENST00000380176 CLTCL1P53675 1640 aa10.89□□□□□ -0.67
PDLIM5-204ENST00000380176 KIDINS220Q9ULH0 1771 aa10.88□□□□□ -0.67
PDLIM5-204ENST00000380176 CEP152O94986 1710 aa10.88□□□□□ -0.67
PDLIM5-204ENST00000380176 TET3O43151 1660 aa10.88□□□□□ -0.67
PDLIM5-204ENST00000380176 EIF2AK4Q9P2K8 1649 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-204ENST00000380176 TRPM2O94759 1503 aa10.88□□□□□ -0.67
PDLIM5-204ENST00000380176 IRX6P78412 446 aaPredicted RBP10.88□□□□□ -0.67
PDLIM5-204ENST00000380176 TESK2Q96S53 571 aa10.88□□□□□ -0.67
PDLIM5-204ENST00000380176 BCL11AQ9H165 835 aa10.88□□□□□ -0.67
PDLIM5-204ENST00000380176 MROH1Q8NDA8 1641 aa10.87□□□□□ -0.67
PDLIM5-204ENST00000380176 ZBED9Q6R2W3 1325 aa10.87□□□□□ -0.67
PDLIM5-204ENST00000380176 VWDEQ8N2E2 1590 aa10.87□□□□□ -0.67
PDLIM5-204ENST00000380176 DISP3Q9P2K9 1392 aa10.87□□□□□ -0.67
PDLIM5-204ENST00000380176 PTPRTO14522 1441 aa10.87□□□□□ -0.67
PDLIM5-204ENST00000380176 SENP3-EIF4A1A0A087X0R7 540 aa10.86□□□□□ -0.67
PDLIM5-204ENST00000380176 RNF17Q9BXT8 1623 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-204ENST00000380176 MADDQ8WXG6 1647 aa10.86□□□□□ -0.67
PDLIM5-204ENST00000380176 NPM1P06748 294 aaKnown RBP eCLIP10.86□□□□□ -0.67
PDLIM5-204ENST00000380176 TSHZ2Q9NRE2 1034 aa10.85□□□□□ -0.67
PDLIM5-204ENST00000380176 COL17A1Q9UMD9 1497 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-204ENST00000380176 HOMEZQ8IX15 550 aa10.84□□□□□ -0.67
PDLIM5-204ENST00000380176 PNISRQ8TF01 805 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-204ENST00000380176 UGGT1Q9NYU2 1555 aa10.84□□□□□ -0.67
PDLIM5-204ENST00000380176 KANK1Q14678 1352 aa10.84□□□□□ -0.67
PDLIM5-204ENST00000380176 PER1O15534 1290 aaPredicted RBP10.83□□□□□ -0.68
PDLIM5-204ENST00000380176 TMC1Q8TDI8 760 aa10.83□□□□□ -0.68
PDLIM5-204ENST00000380176 VSIG10Q8N0Z9 540 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms