RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 CC2D1BQ5T0F9 858 aaKnown RBP11.7□□□□□ -0.54
TRIM6-203ENST00000380107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRIM6-203ENST00000380107 MYBBP1AQ9BQG0 1328 aaKnown RBP11.7□□□□□ -0.54
TRIM6-203ENST00000380107 PLIN1O60240 522 aa11.7□□□□□ -0.54
TRIM6-203ENST00000380107 ANP32AP39687 249 aaKnown RBP11.7□□□□□ -0.54
TRIM6-203ENST00000380107 CDC42BPAQ5VT25 1732 aa11.69□□□□□ -0.54
TRIM6-203ENST00000380107 RRP1P56182 461 aaKnown RBP11.69□□□□□ -0.54
TRIM6-203ENST00000380107 IPO9Q96P70 1041 aaKnown RBP11.68□□□□□ -0.54
TRIM6-203ENST00000380107 RCAN3Q9UKA8 241 aa11.68□□□□□ -0.54
TRIM6-203ENST00000380107 UHRF1BP1Q6BDS2 1440 aa11.67□□□□□ -0.54
TRIM6-203ENST00000380107 ARID4BQ4LE39 1312 aaPredicted RBP11.67□□□□□ -0.54
TRIM6-203ENST00000380107 LRPPRCP42704 1394 aaKnown RBP11.67□□□□□ -0.54
TRIM6-203ENST00000380107 ZBTB47Q9UFB7 747 aaPredicted RBP11.67□□□□□ -0.54
TRIM6-203ENST00000380107 BRD4O60885 1362 aaPredicted RBP11.66□□□□□ -0.54
TRIM6-203ENST00000380107 RALBP1Q15311 655 aa11.66□□□□□ -0.54
TRIM6-203ENST00000380107 ADCY10Q96PN6 1610 aa11.65□□□□□ -0.54
TRIM6-203ENST00000380107 ATP10BO94823 1461 aa11.65□□□□□ -0.55
TRIM6-203ENST00000380107 MAGI1Q96QZ7 1491 aaPredicted RBP11.64□□□□□ -0.55
TRIM6-203ENST00000380107 CARMIL2Q6F5E8 1435 aa11.64□□□□□ -0.55
TRIM6-203ENST00000380107 NLRP13Q86W25 1043 aa11.63□□□□□ -0.55
TRIM6-203ENST00000380107 ABCC10Q5T3U5 1492 aa11.63□□□□□ -0.55
TRIM6-203ENST00000380107 LAS1LQ9Y4W2 734 aaKnown RBP11.63□□□□□ -0.55
TRIM6-203ENST00000380107 KTN1Q86UP2 1357 aaKnown RBP11.63□□□□□ -0.55
TRIM6-203ENST00000380107 SYNJ2O15056 1496 aa11.62□□□□□ -0.55
TRIM6-203ENST00000380107 PER1O15534 1290 aaPredicted RBP11.62□□□□□ -0.55
TRIM6-203ENST00000380107 PANK3Q9H999 370 aa11.62□□□□□ -0.55
TRIM6-203ENST00000380107 ARHGEF12Q9NZN5 1544 aa11.62□□□□□ -0.55
TRIM6-203ENST00000380107 DISP3Q9P2K9 1392 aa11.62□□□□□ -0.55
TRIM6-203ENST00000380107 E9PCH4 1651 aa11.61□□□□□ -0.55
TRIM6-203ENST00000380107 PDE4AP27815 886 aa11.61□□□□□ -0.55
TRIM6-203ENST00000380107 CCDC144AA2RUR9 1427 aa11.6□□□□□ -0.55
TRIM6-203ENST00000380107 KDM5DQ9BY66 1539 aa11.6□□□□□ -0.55
TRIM6-203ENST00000380107 FAM135AQ9P2D6 1515 aa11.6□□□□□ -0.55
TRIM6-203ENST00000380107 PARD3Q8TEW0 1356 aa11.6□□□□□ -0.55
TRIM6-203ENST00000380107 PRAG1Q86YV5 1406 aa11.59□□□□□ -0.55
TRIM6-203ENST00000380107 ABCA8O94911 1581 aa11.59□□□□□ -0.55
TRIM6-203ENST00000380107 C20orf194Q5TEA3 1177 aa11.59□□□□□ -0.55
TRIM6-203ENST00000380107 CRBNQ96SW2 442 aa11.59□□□□□ -0.55
TRIM6-203ENST00000380107 RTL5Q5HYW3 569 aaPredicted RBP11.59□□□□□ -0.55
TRIM6-203ENST00000380107 SHANK2Q9UPX8 1470 aa11.59□□□□□ -0.55
TRIM6-203ENST00000380107 TESK2Q96S53 571 aa11.58□□□□□ -0.56
TRIM6-203ENST00000380107 PTPRGP23470 1445 aa11.58□□□□□ -0.56
TRIM6-203ENST00000380107 TRPM1Q7Z4N2 1603 aa11.57□□□□□ -0.56
TRIM6-203ENST00000380107 MYT1LQ9UL68 1186 aa11.57□□□□□ -0.56
TRIM6-203ENST00000380107 PLA2R1Q13018 1463 aa11.56□□□□□ -0.56
TRIM6-203ENST00000380107 A2MP01023 1474 aa11.56□□□□□ -0.56
TRIM6-203ENST00000380107 SAMD9LQ8IVG5 1584 aa11.56□□□□□ -0.56
TRIM6-203ENST00000380107 NUP160Q12769 1436 aa11.56□□□□□ -0.56
TRIM6-203ENST00000380107 TCERG1O14776 1098 aaKnown RBP11.56□□□□□ -0.56
TRIM6-203ENST00000380107 BACH2Q9BYV9 841 aa11.56□□□□□ -0.56
TRIM6-203ENST00000380107 ADAMTS8Q9UP79 889 aa11.56□□□□□ -0.56
TRIM6-203ENST00000380107 CDC42BPBQ9Y5S2 1711 aa11.55□□□□□ -0.56
TRIM6-203ENST00000380107 CCDC141Q6ZP82 1450 aa11.55□□□□□ -0.56
TRIM6-203ENST00000380107 SYCP2Q9BX26 1530 aa11.54□□□□□ -0.56
TRIM6-203ENST00000380107 SLC4A3P48751 1232 aa11.54□□□□□ -0.56
TRIM6-203ENST00000380107 PDE3BQ13370 1112 aa11.54□□□□□ -0.56
TRIM6-203ENST00000380107 DNAJC5Q9H3Z4 198 aa11.54□□□□□ -0.56
TRIM6-203ENST00000380107 PLEKHH2Q8IVE3 1493 aa11.53□□□□□ -0.56
TRIM6-203ENST00000380107 ERBINQ96RT1 1412 aa11.53□□□□□ -0.56
TRIM6-203ENST00000380107 NEFMP07197 916 aa11.53□□□□□ -0.56
TRIM6-203ENST00000380107 COL17A1Q9UMD9 1497 aaPredicted RBP11.53□□□□□ -0.56
TRIM6-203ENST00000380107 TMF1P82094 1093 aa11.52□□□□□ -0.57
TRIM6-203ENST00000380107 MYO5CQ9NQX4 1742 aa11.51□□□□□ -0.57
TRIM6-203ENST00000380107 ARHGEF5Q12774 1597 aa11.51□□□□□ -0.57
TRIM6-203ENST00000380107 ARHGAP5Q13017 1502 aa11.51□□□□□ -0.57
TRIM6-203ENST00000380107 CCDC146Q8IYE0 955 aa11.51□□□□□ -0.57
TRIM6-203ENST00000380107 RTN4Q9NQC3 1192 aaKnown RBP11.5□□□□□ -0.57
TRIM6-203ENST00000380107 PLEKHH1Q9ULM0 1364 aa11.5□□□□□ -0.57
TRIM6-203ENST00000380107 IL27Q8NEV9 243 aa11.49□□□□□ -0.57
TRIM6-203ENST00000380107 BLMP54132 1417 aaPredicted RBP11.49□□□□□ -0.57
TRIM6-203ENST00000380107 TTC37Q6PGP7 1564 aa11.49□□□□□ -0.57
TRIM6-203ENST00000380107 GPRASP1Q5JY77 1395 aa11.49□□□□□ -0.57
TRIM6-203ENST00000380107 PREX2Q70Z35 1606 aa11.48□□□□□ -0.57
TRIM6-203ENST00000380107 PRDM15P57071 1507 aaPredicted RBP11.48□□□□□ -0.57
TRIM6-203ENST00000380107 PPP2R1AP30153 589 aa11.48□□□□□ -0.57
TRIM6-203ENST00000380107 WDR43Q15061 677 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRIM6-203ENST00000380107 KNSTRNQ9Y448 316 aa11.48□□□□□ -0.57
TRIM6-203ENST00000380107 MAGI2Q86UL8 1455 aa11.47□□□□□ -0.57
TRIM6-203ENST00000380107 MS4A1P11836 297 aa11.47□□□□□ -0.57
TRIM6-203ENST00000380107 RGS3P49796 1198 aa11.46□□□□□ -0.57
TRIM6-203ENST00000380107 DUSP27Q5VZP5 1158 aa11.46□□□□□ -0.57
TRIM6-203ENST00000380107 SPINK5Q9NQ38 1064 aaPredicted RBP11.46□□□□□ -0.58
TRIM6-203ENST00000380107 RSPH4AQ5TD94 716 aa11.45□□□□□ -0.58
TRIM6-203ENST00000380107 ZMYM4Q5VZL5 1548 aa11.45□□□□□ -0.58
TRIM6-203ENST00000380107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRIM6-203ENST00000380107 WASHC2CQ9Y4E1 1318 aa11.44□□□□□ -0.58
TRIM6-203ENST00000380107 UNC13BO14795 1591 aa11.44□□□□□ -0.58
TRIM6-203ENST00000380107 AMER1Q5JTC6 1135 aaPredicted RBP11.44□□□□□ -0.58
TRIM6-203ENST00000380107 WDR7Q9Y4E6 1490 aa11.44□□□□□ -0.58
TRIM6-203ENST00000380107 KDM2BQ8NHM5 1336 aa11.43□□□□□ -0.58
TRIM6-203ENST00000380107 APAF1O14727 1248 aa11.42□□□□□ -0.58
TRIM6-203ENST00000380107 BCAR3O75815 825 aa11.42□□□□□ -0.58
TRIM6-203ENST00000380107 GOLGA2Q08379 1002 aa11.42□□□□□ -0.58
TRIM6-203ENST00000380107 AFAP1Q8N556 730 aa11.42□□□□□ -0.58
TRIM6-203ENST00000380107 DMRT2Q9Y5R5 561 aa11.42□□□□□ -0.58
TRIM6-203ENST00000380107 IQGAP3Q86VI3 1631 aa11.42□□□□□ -0.58
TRIM6-203ENST00000380107 ERCC6L2Q5T890 1561 aa11.42□□□□□ -0.58
TRIM6-203ENST00000380107 EIF2AK4Q9P2K8 1649 aaKnown RBP11.4□□□□□ -0.58
TRIM6-203ENST00000380107 LAMC1P11047 1609 aa11.39□□□□□ -0.59
TRIM6-203ENST00000380107 TRAPPC8Q9Y2L5 1435 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms