RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 SLKQ9H2G2 1235 aaPredicted RBP14.7□□□□□ -0.06
SMAD9-202ENST00000379826 IL27Q8NEV9 243 aa14.69□□□□□ -0.06
SMAD9-202ENST00000379826 CARMIL2Q6F5E8 1435 aa14.68□□□□□ -0.06
SMAD9-202ENST00000379826 GOLGA2Q08379 1002 aa14.68□□□□□ -0.06
SMAD9-202ENST00000379826 CCDC144AA2RUR9 1427 aa14.68□□□□□ -0.06
SMAD9-202ENST00000379826 MIA2Q96PC5 1412 aa14.68□□□□□ -0.06
SMAD9-202ENST00000379826 CCDC9Q9Y3X0 531 aaKnown RBP14.68□□□□□ -0.06
SMAD9-202ENST00000379826 CTTNBP2Q8WZ74 1663 aa14.67□□□□□ -0.06
SMAD9-202ENST00000379826 PRG4Q92954 1404 aaPredicted RBP14.67□□□□□ -0.06
SMAD9-202ENST00000379826 HDGFP51858 240 aaKnown RBP14.67□□□□□ -0.06
SMAD9-202ENST00000379826 ANKRD50Q9ULJ7 1429 aa14.67□□□□□ -0.06
SMAD9-202ENST00000379826 BRD4O60885 1362 aaPredicted RBP14.67□□□□□ -0.06
SMAD9-202ENST00000379826 FTSJ3Q8IY81 847 aaKnown RBP14.67□□□□□ -0.06
SMAD9-202ENST00000379826 KIAA1107Q9UPP5 1409 aa14.66□□□□□ -0.06
SMAD9-202ENST00000379826 GRIN2BQ13224 1484 aa14.66□□□□□ -0.06
SMAD9-202ENST00000379826 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
SMAD9-202ENST00000379826 NBPF1Q3BBV0 1214 aa14.65□□□□□ -0.06
SMAD9-202ENST00000379826 ABCC5O15440 1437 aa14.65□□□□□ -0.07
SMAD9-202ENST00000379826 GSE1Q14687 1217 aa14.64□□□□□ -0.07
SMAD9-202ENST00000379826 UGGT2Q9NYU1 1516 aa14.64□□□□□ -0.07
SMAD9-202ENST00000379826 MS4A1P11836 297 aa14.63□□□□□ -0.07
SMAD9-202ENST00000379826 JPH4Q96JJ6 628 aa14.63□□□□□ -0.07
SMAD9-202ENST00000379826 CENPQQ7L2Z9 268 aaPredicted RBP14.63□□□□□ -0.07
SMAD9-202ENST00000379826 FAM161AQ3B820 660 aa14.63□□□□□ -0.07
SMAD9-202ENST00000379826 USP35Q9P2H5 1018 aa14.63□□□□□ -0.07
SMAD9-202ENST00000379826 RPRD2Q5VT52 1461 aaKnown RBP14.62□□□□□ -0.07
SMAD9-202ENST00000379826 ANO8Q9HCE9 1232 aaPredicted RBP14.62□□□□□ -0.07
SMAD9-202ENST00000379826 ADAMTS8Q9UP79 889 aa14.62□□□□□ -0.07
SMAD9-202ENST00000379826 RRP7AQ9Y3A4 280 aaKnown RBP14.62□□□□□ -0.07
SMAD9-202ENST00000379826 GZF1Q9H116 711 aaPredicted RBP14.61□□□□□ -0.07
SMAD9-202ENST00000379826 THOC2Q8NI27 1593 aaKnown RBP14.61□□□□□ -0.07
SMAD9-202ENST00000379826 MORC1Q86VD1 984 aa14.6□□□□□ -0.07
SMAD9-202ENST00000379826 BACH2Q9BYV9 841 aa14.6□□□□□ -0.07
SMAD9-202ENST00000379826 CFAP53Q96M91 514 aa14.6□□□□□ -0.07
SMAD9-202ENST00000379826 URB2Q14146 1524 aaKnown RBP14.6□□□□□ -0.07
SMAD9-202ENST00000379826 CLUAP1Q96AJ1 413 aa14.6□□□□□ -0.07
SMAD9-202ENST00000379826 NFKBIBQ15653 356 aa14.59□□□□□ -0.07
SMAD9-202ENST00000379826 IQGAP2Q13576 1575 aa14.59□□□□□ -0.07
SMAD9-202ENST00000379826 NAP1L5Q96NT1 182 aaPredicted RBP14.58□□□□□ -0.07
SMAD9-202ENST00000379826 ROCK1Q13464 1354 aa14.58□□□□□ -0.07
SMAD9-202ENST00000379826 GGT6Q6P531 493 aa14.58□□□□□ -0.08
SMAD9-202ENST00000379826 U2SURPO15042 1029 aaKnown RBP14.58□□□□□ -0.08
SMAD9-202ENST00000379826 BRPF3Q9ULD4 1205 aa14.58□□□□□ -0.08
SMAD9-202ENST00000379826 BCL2L13Q9BXK5 485 aa14.58□□□□□ -0.08
SMAD9-202ENST00000379826 CAMSAP2Q08AD1 1489 aa14.57□□□□□ -0.08
SMAD9-202ENST00000379826 APAF1O14727 1248 aa14.57□□□□□ -0.08
SMAD9-202ENST00000379826 SAFB2Q14151 953 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMAD9-202ENST00000379826 ANP32BQ92688 251 aaKnown RBP14.57□□□□□ -0.08
SMAD9-202ENST00000379826 COG6Q9Y2V7 657 aa14.56□□□□□ -0.08
SMAD9-202ENST00000379826 CENPJQ9HC77 1338 aaPredicted RBP14.56□□□□□ -0.08
SMAD9-202ENST00000379826 C20orf194Q5TEA3 1177 aa14.55□□□□□ -0.08
SMAD9-202ENST00000379826 C9orf84Q5VXU9 1444 aa14.54□□□□□ -0.08
SMAD9-202ENST00000379826 MFAP1P55081 439 aaKnown RBP14.53□□□□□ -0.08
SMAD9-202ENST00000379826 KDM6BO15054 1643 aa14.53□□□□□ -0.08
SMAD9-202ENST00000379826 NPHP1O15259 732 aa14.52□□□□□ -0.08
SMAD9-202ENST00000379826 MAPK8IP3Q9UPT6 1336 aa14.52□□□□□ -0.08
SMAD9-202ENST00000379826 TRIM44Q96DX7 344 aaPredicted RBP14.52□□□□□ -0.09
SMAD9-202ENST00000379826 NCLP19338 710 aaKnown RBP14.52□□□□□ -0.09
SMAD9-202ENST00000379826 EID1Q9Y6B2 187 aa14.52□□□□□ -0.09
SMAD9-202ENST00000379826 TROQ12816 1431 aaPredicted RBP14.51□□□□□ -0.09
SMAD9-202ENST00000379826 NUTM2DQ5VT03 806 aaPredicted RBP14.51□□□□□ -0.09
SMAD9-202ENST00000379826 TCOF1Q13428 1488 aaKnown RBP14.51□□□□□ -0.09
SMAD9-202ENST00000379826 PPP2R1AP30153 589 aa14.51□□□□□ -0.09
SMAD9-202ENST00000379826 HSP90AB1P08238 724 aaKnown RBP14.5□□□□□ -0.09
SMAD9-202ENST00000379826 ITPRIPQ8IWB1 547 aa14.5□□□□□ -0.09
SMAD9-202ENST00000379826 PANK1Q8TE04 598 aa14.5□□□□□ -0.09
SMAD9-202ENST00000379826 FRAT2O75474 233 aaPredicted RBP14.5□□□□□ -0.09
SMAD9-202ENST00000379826 L1TD1Q5T7N2 865 aaKnown RBP14.5□□□□□ -0.09
SMAD9-202ENST00000379826 HSCBQ8IWL3 235 aa14.5□□□□□ -0.09
SMAD9-202ENST00000379826 KANK1Q14678 1352 aa14.5□□□□□ -0.09
SMAD9-202ENST00000379826 LAMC3Q9Y6N6 1575 aa14.5□□□□□ -0.09
SMAD9-202ENST00000379826 MAGI3Q5TCQ9 1506 aa14.5□□□□□ -0.09
SMAD9-202ENST00000379826 BCAR3O75815 825 aa14.5□□□□□ -0.09
SMAD9-202ENST00000379826 U2AF1L5P0DN76 240 aaPredicted RBP14.49□□□□□ -0.09
SMAD9-202ENST00000379826 U2AF1Q01081 240 aaKnown RBP eCLIP14.49□□□□□ -0.09
SMAD9-202ENST00000379826 EIF3AQ14152 1382 aaKnown RBP14.49□□□□□ -0.09
SMAD9-202ENST00000379826 DHX29Q7Z478 1369 aaKnown RBP14.49□□□□□ -0.09
SMAD9-202ENST00000379826 MYH16Q9H6N6 1097 aa14.48□□□□□ -0.09
SMAD9-202ENST00000379826 E9PSI1 815 aa14.48□□□□□ -0.09
SMAD9-202ENST00000379826 PMFBP1Q8TBY8 1022 aa14.48□□□□□ -0.09
SMAD9-202ENST00000379826 RWDD1Q9H446 243 aaPredicted RBP14.48□□□□□ -0.09
SMAD9-202ENST00000379826 GLIPR1L2Q4G1C9 344 aa14.48□□□□□ -0.09
SMAD9-202ENST00000379826 PLB1Q6P1J6 1458 aa14.47□□□□□ -0.09
SMAD9-202ENST00000379826 FOXD4L1Q9NU39 408 aa14.47□□□□□ -0.09
SMAD9-202ENST00000379826 ERBINQ96RT1 1412 aa14.46□□□□□ -0.09
SMAD9-202ENST00000379826 KIF3BO15066 747 aa14.46□□□□□ -0.09
SMAD9-202ENST00000379826 RSPH4AQ5TD94 716 aa14.46□□□□□ -0.1
SMAD9-202ENST00000379826 TRAK1Q9UPV9 953 aa14.45□□□□□ -0.1
SMAD9-202ENST00000379826 TPRNQ4KMQ1 711 aa14.45□□□□□ -0.1
SMAD9-202ENST00000379826 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
SMAD9-202ENST00000379826 STK26Q9P289 416 aa14.45□□□□□ -0.1
SMAD9-202ENST00000379826 PTPRGP23470 1445 aa14.45□□□□□ -0.1
SMAD9-202ENST00000379826 SMC4Q9NTJ3 1288 aa14.44□□□□□ -0.1
SMAD9-202ENST00000379826 GOLGA6L3A6NEY3 463 aa14.44□□□□□ -0.1
SMAD9-202ENST00000379826 EFCAB2Q5VUJ9 269 aa14.44□□□□□ -0.1
SMAD9-202ENST00000379826 TEX14Q8IWB6 1497 aa14.44□□□□□ -0.1
SMAD9-202ENST00000379826 GCC2Q8IWJ2 1684 aa14.44□□□□□ -0.1
SMAD9-202ENST00000379826 SRPK2P78362 688 aaKnown RBP14.43□□□□□ -0.1
SMAD9-202ENST00000379826 SPAG9O60271 1321 aaKnown RBP14.43□□□□□ -0.1
SMAD9-202ENST00000379826 DISP3Q9P2K9 1392 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms