RNA–Protein interactions for RNA: ENST00000379806.9

PDHA1-204, Transcript of pyruvate dehydrogenase E1 alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene PDHA1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDHA1-204ENST00000379806 RSPH4AQ5TD94 716 aa15.33■□□□□ 0.04
PDHA1-204ENST00000379806 CDC42BPBQ9Y5S2 1711 aa15.33■□□□□ 0.04
PDHA1-204ENST00000379806 SHANK2Q9UPX8 1470 aa15.33■□□□□ 0.04
PDHA1-204ENST00000379806 AFAP1Q8N556 730 aa15.31■□□□□ 0.04
PDHA1-204ENST00000379806 UBE2Q2Q8WVN8 375 aa15.31■□□□□ 0.04
PDHA1-204ENST00000379806 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.31■□□□□ 0.044e-8■■□□□ 13.4
PDHA1-204ENST00000379806 ROCK2O75116 1388 aaKnown RBP15.3■□□□□ 0.04
PDHA1-204ENST00000379806 CCDC144AA2RUR9 1427 aa15.3■□□□□ 0.04
PDHA1-204ENST00000379806 ABCC2Q92887 1545 aa15.3■□□□□ 0.04
PDHA1-204ENST00000379806 PREX2Q70Z35 1606 aa15.29■□□□□ 0.04
PDHA1-204ENST00000379806 PLEKHH2Q8IVE3 1493 aa15.29■□□□□ 0.04
PDHA1-204ENST00000379806 SPATA31E1Q6ZUB1 1445 aa15.28■□□□□ 0.04
PDHA1-204ENST00000379806 NBPF1Q3BBV0 1214 aa15.27■□□□□ 0.04
PDHA1-204ENST00000379806 FAM135AQ9P2D6 1515 aa15.27■□□□□ 0.03
PDHA1-204ENST00000379806 SPAG9O60271 1321 aaKnown RBP15.26■□□□□ 0.03
PDHA1-204ENST00000379806 ARHGEF5Q12774 1597 aa15.26■□□□□ 0.03
PDHA1-204ENST00000379806 SHROOM2Q13796 1616 aa15.24■□□□□ 0.03
PDHA1-204ENST00000379806 MYO5CQ9NQX4 1742 aa15.23■□□□□ 0.03
PDHA1-204ENST00000379806 TMC1Q8TDI8 760 aa15.23■□□□□ 0.03
PDHA1-204ENST00000379806 TRAPPC8Q9Y2L5 1435 aa15.23■□□□□ 0.03
PDHA1-204ENST00000379806 ARHGEF12Q9NZN5 1544 aa15.22■□□□□ 0.03
PDHA1-204ENST00000379806 FANCIQ9NVI1 1328 aa15.22■□□□□ 0.03
PDHA1-204ENST00000379806 ZCCHC11Q5TAX3 1644 aaKnown RBP15.21■□□□□ 0.03
PDHA1-204ENST00000379806 PLCH2O75038 1416 aa15.21■□□□□ 0.02
PDHA1-204ENST00000379806 BCORL1Q5H9F3 1711 aa15.21■□□□□ 0.02
PDHA1-204ENST00000379806 ERICH6BQ5W0A0 696 aa15.2■□□□□ 0.02
PDHA1-204ENST00000379806 KIF3BO15066 747 aa15.19■□□□□ 0.02
PDHA1-204ENST00000379806 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
PDHA1-204ENST00000379806 RALGAPBQ86X10 1494 aa15.18■□□□□ 0.02
PDHA1-204ENST00000379806 NOP58Q9Y2X3 529 aaKnown RBP15.18■□□□□ 0.02
PDHA1-204ENST00000379806 PKNOX2Q96KN3 472 aa15.17■□□□□ 0.02
PDHA1-204ENST00000379806 PAK3O75914 559 aaPredicted RBP15.17■□□□□ 0.02
PDHA1-204ENST00000379806 KDM5CP41229 1560 aa15.17■□□□□ 0.02
PDHA1-204ENST00000379806 KDM5DQ9BY66 1539 aa15.16■□□□□ 0.02
PDHA1-204ENST00000379806 CC2D1BQ5T0F9 858 aaKnown RBP15.16■□□□□ 0.02
PDHA1-204ENST00000379806 DHX29Q7Z478 1369 aaKnown RBP15.15■□□□□ 0.02
PDHA1-204ENST00000379806 CLASP1Q7Z460 1538 aa15.15■□□□□ 0.02
PDHA1-204ENST00000379806 UHRF1BP1Q6BDS2 1440 aa15.15■□□□□ 0.02
PDHA1-204ENST00000379806 CHGAP10645 457 aaKnown RBP15.15■□□□□ 0.02
PDHA1-204ENST00000379806 SENP3Q9H4L4 574 aaPredicted RBP15.15■□□□□ 0.02
PDHA1-204ENST00000379806 PLA2R1Q13018 1463 aa15.14■□□□□ 0.01
PDHA1-204ENST00000379806 SCAPERQ9BY12 1400 aa15.14■□□□□ 0.01
PDHA1-204ENST00000379806 DUOX2Q9NRD8 1548 aa15.13■□□□□ 0.01
PDHA1-204ENST00000379806 PRAG1Q86YV5 1406 aa15.12■□□□□ 0.01
PDHA1-204ENST00000379806 ZBED9Q6R2W3 1325 aa15.11■□□□□ 0.01
PDHA1-204ENST00000379806 A2MP01023 1474 aa15.11■□□□□ 0.01
PDHA1-204ENST00000379806 FANCAO15360 1455 aa15.11■□□□□ 0.01
PDHA1-204ENST00000379806 PLEKHG5O94827 1062 aa15.1■□□□□ 0.01
PDHA1-204ENST00000379806 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
PDHA1-204ENST00000379806 WDR7Q9Y4E6 1490 aa15.09■□□□□ 0.01
PDHA1-204ENST00000379806 ABCC1P33527 1531 aa15.09■□□□□ 0.01
PDHA1-204ENST00000379806 ARID4BQ4LE39 1312 aaPredicted RBP15.09■□□□□ 0.01
PDHA1-204ENST00000379806 ERBINQ96RT1 1412 aa15.08■□□□□ 0.01
PDHA1-204ENST00000379806 UHRF1BP1LA0JNW5 1464 aa15.08■□□□□ 0.01
PDHA1-204ENST00000379806 GGT6Q6P531 493 aa15.08■□□□□ 0.01
PDHA1-204ENST00000379806 POLR1AO95602 1720 aaPredicted RBP15.08■□□□□ 0
PDHA1-204ENST00000379806 MAST1Q9Y2H9 1570 aa15.08■□□□□ 0
PDHA1-204ENST00000379806 PANK3Q9H999 370 aa15.08■□□□□ 0
PDHA1-204ENST00000379806 KANK1Q14678 1352 aa15.08■□□□□ 0
PDHA1-204ENST00000379806 TMF1P82094 1093 aa15.07■□□□□ 0
PDHA1-204ENST00000379806 B4GALNT3Q6L9W6 998 aa15.07■□□□□ 0
PDHA1-204ENST00000379806 UNC13BO14795 1591 aa15.07■□□□□ 0
PDHA1-204ENST00000379806 ASXL2Q76L83 1435 aa15.07■□□□□ 0
PDHA1-204ENST00000379806 ADGRL1O94910 1474 aa15.07■□□□□ 0
PDHA1-204ENST00000379806 PLXNC1O60486 1568 aa15.07■□□□□ 0
PDHA1-204ENST00000379806 DISP3Q9P2K9 1392 aa15.07■□□□□ 0
PDHA1-204ENST00000379806 PNISRQ8TF01 805 aaKnown RBP15.06■□□□□ 0
PDHA1-204ENST00000379806 NPM2Q86SE8 214 aaKnown RBP15.05■□□□□ 0
PDHA1-204ENST00000379806 MYBBP1AQ9BQG0 1328 aaKnown RBP15.05■□□□□ -0
PDHA1-204ENST00000379806 KTN1Q86UP2 1357 aaKnown RBP15.05■□□□□ -0
PDHA1-204ENST00000379806 ZBTB47Q9UFB7 747 aaPredicted RBP15.05■□□□□ -0
PDHA1-204ENST00000379806 IQGAP3Q86VI3 1631 aa15.04■□□□□ -0
PDHA1-204ENST00000379806 RALBP1Q15311 655 aa15.03■□□□□ -0
PDHA1-204ENST00000379806 LAS1LQ9Y4W2 734 aaKnown RBP15.03■□□□□ -0
PDHA1-204ENST00000379806 TESK2Q96S53 571 aa15.02■□□□□ -0
PDHA1-204ENST00000379806 TRPM1Q7Z4N2 1603 aa15.02□□□□□ -0.01
PDHA1-204ENST00000379806 ANP32AP39687 249 aaKnown RBP15.01□□□□□ -0.01
PDHA1-204ENST00000379806 ZFYVE16Q7Z3T8 1539 aa15□□□□□ -0.01
PDHA1-204ENST00000379806 NUTM2DQ5VT03 806 aaPredicted RBP15□□□□□ -0.01
PDHA1-204ENST00000379806 CFAP70Q5T0N1 1121 aa15□□□□□ -0.01
PDHA1-204ENST00000379806 NLRP13Q86W25 1043 aa15□□□□□ -0.01
PDHA1-204ENST00000379806 PPP4R2Q9NY27 417 aa15□□□□□ -0.01
PDHA1-204ENST00000379806 ATP7AQ04656 1500 aa14.99□□□□□ -0.01
PDHA1-204ENST00000379806 NUDCQ9Y266 331 aa14.99□□□□□ -0.01
PDHA1-204ENST00000379806 RAPGEF3O95398 923 aa14.99□□□□□ -0.01
PDHA1-204ENST00000379806 KNSTRNQ9Y448 316 aa14.98□□□□□ -0.01
PDHA1-204ENST00000379806 CFAP65Q6ZU64 1925 aaKnown RBP14.98□□□□□ -0.01
PDHA1-204ENST00000379806 BRPF3Q9ULD4 1205 aa14.97□□□□□ -0.01
PDHA1-204ENST00000379806 ATP10AO60312 1499 aa14.97□□□□□ -0.01
PDHA1-204ENST00000379806 RTEL1-TNFRSF6BF6WH68 1400 aa14.97□□□□□ -0.01
PDHA1-204ENST00000379806 PODXL2Q9NZ53 605 aa14.97□□□□□ -0.01
PDHA1-204ENST00000379806 E9PCH4 1651 aa14.96□□□□□ -0.01
PDHA1-204ENST00000379806 NEFMP07197 916 aa14.96□□□□□ -0.01
PDHA1-204ENST00000379806 UGGT1Q9NYU2 1555 aa14.96□□□□□ -0.01
PDHA1-204ENST00000379806 BRD4O60885 1362 aaPredicted RBP14.96□□□□□ -0.01
PDHA1-204ENST00000379806 VSIG10Q8N0Z9 540 aa14.96□□□□□ -0.01
PDHA1-204ENST00000379806 PER1O15534 1290 aaPredicted RBP14.95□□□□□ -0.02
PDHA1-204ENST00000379806 CYB5RLQ6IPT4 315 aa14.95□□□□□ -0.02
PDHA1-204ENST00000379806 MAGI2Q86UL8 1455 aa14.95□□□□□ -0.02
PDHA1-204ENST00000379806 CD109Q6YHK3 1445 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms