RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 KDM2AQ9Y2K7 1162 aa21.13■□□□□ 0.97
SNX2-201ENST00000379516 DCAF11Q8TEB1 546 aa21.13■□□□□ 0.97
SNX2-201ENST00000379516 WASHC2AQ641Q2 1341 aa21.13■□□□□ 0.97
SNX2-201ENST00000379516 UHRF1BP1Q6BDS2 1440 aa21.12■□□□□ 0.97
SNX2-201ENST00000379516 DHX29Q7Z478 1369 aaKnown RBP21.12■□□□□ 0.97
SNX2-201ENST00000379516 RIMBP3CA6NJZ7 1639 aa21.11■□□□□ 0.97
SNX2-201ENST00000379516 RIMBP3BA6NNM3 1639 aa21.11■□□□□ 0.97
SNX2-201ENST00000379516 RIMBP3Q9UFD9 1639 aa21.11■□□□□ 0.97
SNX2-201ENST00000379516 KIF3BO15066 747 aa21.11■□□□□ 0.97
SNX2-201ENST00000379516 SPATA31E1Q6ZUB1 1445 aa21.1■□□□□ 0.97
SNX2-201ENST00000379516 ANP32CO43423 234 aa21.09■□□□□ 0.97
SNX2-201ENST00000379516 RGL3Q3MIN7 710 aa21.08■□□□□ 0.97
SNX2-201ENST00000379516 POGZQ7Z3K3 1410 aa21.08■□□□□ 0.97
SNX2-201ENST00000379516 ATP10AO60312 1499 aa21.08■□□□□ 0.96
SNX2-201ENST00000379516 KANK1Q14678 1352 aa21.08■□□□□ 0.96
SNX2-201ENST00000379516 DEPDC5O75140 1603 aa21.07■□□□□ 0.96
SNX2-201ENST00000379516 KIDINS220Q9ULH0 1771 aa21.07■□□□□ 0.96
SNX2-201ENST00000379516 C11orf95C9JLR9 678 aaPredicted RBP21.07■□□□□ 0.96
SNX2-201ENST00000379516 RALGAPBQ86X10 1494 aa21.05■□□□□ 0.96
SNX2-201ENST00000379516 NEO1Q92859 1461 aa21.05■□□□□ 0.96
SNX2-201ENST00000379516 USP47Q96K76 1375 aa21.04■□□□□ 0.96
SNX2-201ENST00000379516 EIF2AK4Q9P2K8 1649 aaKnown RBP21.04■□□□□ 0.96
SNX2-201ENST00000379516 CCDC7Q96M83 1385 aa21.04■□□□□ 0.96
SNX2-201ENST00000379516 SCAF1Q9H7N4 1312 aaKnown RBP21.03■□□□□ 0.96
SNX2-201ENST00000379516 KDM5CP41229 1560 aa21.03■□□□□ 0.96
SNX2-201ENST00000379516 CARD11Q9BXL7 1154 aa21.02■□□□□ 0.96
SNX2-201ENST00000379516 MLH3Q9UHC1 1453 aa21.02■□□□□ 0.96
SNX2-201ENST00000379516 E9PCH4 1651 aa21.02■□□□□ 0.96
SNX2-201ENST00000379516 A2MP01023 1474 aa21.02■□□□□ 0.95
SNX2-201ENST00000379516 VWDEQ8N2E2 1590 aa21■□□□□ 0.95
SNX2-201ENST00000379516 RAPGEF3O95398 923 aa21■□□□□ 0.95
SNX2-201ENST00000379516 PRDM15P57071 1507 aaPredicted RBP20.99■□□□□ 0.95
SNX2-201ENST00000379516 PRAG1Q86YV5 1406 aa20.99■□□□□ 0.95
SNX2-201ENST00000379516 HECW2Q9P2P5 1572 aa20.98■□□□□ 0.95
SNX2-201ENST00000379516 TET3O43151 1660 aa20.98■□□□□ 0.95
SNX2-201ENST00000379516 KIF7Q2M1P5 1343 aa20.98■□□□□ 0.95
SNX2-201ENST00000379516 MAP3K4Q9Y6R4 1608 aa20.98■□□□□ 0.95
SNX2-201ENST00000379516 MROH1Q8NDA8 1641 aa20.97■□□□□ 0.95
SNX2-201ENST00000379516 CCER2I3L3R5 266 aa20.97■□□□□ 0.95
SNX2-201ENST00000379516 ROCK2O75116 1388 aaKnown RBP20.97■□□□□ 0.95
SNX2-201ENST00000379516 PTPRTO14522 1441 aa20.97■□□□□ 0.95
SNX2-201ENST00000379516 GLI2P10070 1586 aa20.96■□□□□ 0.95
SNX2-201ENST00000379516 TRPM2O94759 1503 aa20.96■□□□□ 0.95
SNX2-201ENST00000379516 CNTLNQ9NXG0 1405 aa20.96■□□□□ 0.95
SNX2-201ENST00000379516 FAM69CQ0P6D2 419 aa20.96■□□□□ 0.95
SNX2-201ENST00000379516 SPHKAPQ2M3C7 1700 aa20.93■□□□□ 0.94
SNX2-201ENST00000379516 FRMPD1Q5SYB0 1578 aa20.92■□□□□ 0.94
SNX2-201ENST00000379516 GGT6Q6P531 493 aa20.91■□□□□ 0.94
SNX2-201ENST00000379516 ABCA6Q8N139 1617 aa20.91■□□□□ 0.94
SNX2-201ENST00000379516 TRPM1Q7Z4N2 1603 aa20.9■□□□□ 0.94
SNX2-201ENST00000379516 ST20-MTHFSA0A0A6YYL1 179 aa20.9■□□□□ 0.94
SNX2-201ENST00000379516 NBPF1Q3BBV0 1214 aa20.9■□□□□ 0.94
SNX2-201ENST00000379516 RNF17Q9BXT8 1623 aaKnown RBP20.9■□□□□ 0.94
SNX2-201ENST00000379516 POLR1AO95602 1720 aaPredicted RBP20.9■□□□□ 0.94
SNX2-201ENST00000379516 BCORL1Q5H9F3 1711 aa20.89■□□□□ 0.94
SNX2-201ENST00000379516 POLR3GLQ9BT43 218 aa20.89■□□□□ 0.94
SNX2-201ENST00000379516 GTF3C3Q9Y5Q9 886 aa20.89■□□□□ 0.94
SNX2-201ENST00000379516 CLTCL1P53675 1640 aa20.89■□□□□ 0.93
SNX2-201ENST00000379516 DIP2BQ9P265 1576 aa20.89■□□□□ 0.93
SNX2-201ENST00000379516 EFCAB6Q5THR3 1501 aa20.88■□□□□ 0.93
SNX2-201ENST00000379516 LMTK2Q8IWU2 1503 aa20.88■□□□□ 0.93
SNX2-201ENST00000379516 ARID4BQ4LE39 1312 aaPredicted RBP20.87■□□□□ 0.93
SNX2-201ENST00000379516 RICTORQ6R327 1708 aa20.86■□□□□ 0.93
SNX2-201ENST00000379516 CEP152O94986 1710 aa20.86■□□□□ 0.93
SNX2-201ENST00000379516 GPRASP1Q5JY77 1395 aa20.85■□□□□ 0.93
SNX2-201ENST00000379516 PPRC1Q5VV67 1664 aaKnown RBP20.85■□□□□ 0.93
SNX2-201ENST00000379516 DIP2CQ9Y2E4 1556 aa20.85■□□□□ 0.93
SNX2-201ENST00000379516 WASHC2CQ9Y4E1 1318 aa20.83■□□□□ 0.93
SNX2-201ENST00000379516 STAC3Q96MF2 364 aa20.82■□□□□ 0.92
SNX2-201ENST00000379516 YEATS2Q9ULM3 1422 aa20.81■□□□□ 0.92
SNX2-201ENST00000379516 UGGT1Q9NYU2 1555 aa20.81■□□□□ 0.92
SNX2-201ENST00000379516 PRKRIP1Q9H875 184 aaPredicted RBP20.8■□□□□ 0.92
SNX2-201ENST00000379516 LAMC1P11047 1609 aa20.79■□□□□ 0.92
SNX2-201ENST00000379516 NPATQ14207 1427 aa20.79■□□□□ 0.92
SNX2-201ENST00000379516 ABCC3O15438 1527 aa20.77■□□□□ 0.92
SNX2-201ENST00000379516 TSPOAP1O95153 1857 aa20.77■□□□□ 0.92
SNX2-201ENST00000379516 MADDQ8WXG6 1647 aa20.77■□□□□ 0.92
SNX2-201ENST00000379516 NEURL4Q96JN8 1562 aa20.76■□□□□ 0.91
SNX2-201ENST00000379516 ZMYM4Q5VZL5 1548 aa20.73■□□□□ 0.91
SNX2-201ENST00000379516 CHGAP10645 457 aaKnown RBP20.73■□□□□ 0.91
SNX2-201ENST00000379516 KIF1BO60333 1816 aa20.72■□□□□ 0.91
SNX2-201ENST00000379516 TESK2Q96S53 571 aa20.71■□□□□ 0.91
SNX2-201ENST00000379516 CAMSAP1Q5T5Y3 1602 aa20.7■□□□□ 0.9
SNX2-201ENST00000379516 CNGB1Q14028 1251 aaPredicted RBP20.68■□□□□ 0.9
SNX2-201ENST00000379516 CCDC184Q52MB2 194 aa20.68■□□□□ 0.9
SNX2-201ENST00000379516 ADGRF5Q8IZF2 1346 aa20.68■□□□□ 0.9
SNX2-201ENST00000379516 MYOM2P54296 1465 aa20.68■□□□□ 0.9
SNX2-201ENST00000379516 ADGRB3O60242 1522 aa20.67■□□□□ 0.9
SNX2-201ENST00000379516 MROH2AA6NES4 1674 aa20.67■□□□□ 0.9
SNX2-201ENST00000379516 CFAP65Q6ZU64 1925 aaKnown RBP20.66■□□□□ 0.9
SNX2-201ENST00000379516 NOS1P29475 1434 aa20.66■□□□□ 0.9
SNX2-201ENST00000379516 TMF1P82094 1093 aa20.66■□□□□ 0.9
SNX2-201ENST00000379516 COL17A1Q9UMD9 1497 aaPredicted RBP20.66■□□□□ 0.9
SNX2-201ENST00000379516 ARHGAP31Q2M1Z3 1444 aa20.65■□□□□ 0.9
SNX2-201ENST00000379516 DISP3Q9P2K9 1392 aa20.65■□□□□ 0.9
SNX2-201ENST00000379516 MRS2Q9HD23 443 aa20.65■□□□□ 0.9
SNX2-201ENST00000379516 SCAF11Q99590 1463 aaKnown RBP20.65■□□□□ 0.9
SNX2-201ENST00000379516 CFAP70Q5T0N1 1121 aa20.65■□□□□ 0.9
SNX2-201ENST00000379516 ZC3H13Q5T200 1668 aaKnown RBP20.64■□□□□ 0.9
SNX2-201ENST00000379516 KIF13AQ9H1H9 1805 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms