RNA–Protein interactions for RNA: ENST00000378633.5

CDK11A-205, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best) BASIC

Gene CDK11A, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-205ENST00000378633 UNC13BO14795 1591 aa25.53■■□□□ 1.68
CDK11A-205ENST00000378633 ABCC2Q92887 1545 aa25.52■■□□□ 1.68
CDK11A-205ENST00000378633 PPP4R2Q9NY27 417 aa25.52■■□□□ 1.68
CDK11A-205ENST00000378633 CNGB1Q14028 1251 aaPredicted RBP25.51■■□□□ 1.67
CDK11A-205ENST00000378633 CCDC144AA2RUR9 1427 aa25.51■■□□□ 1.67
CDK11A-205ENST00000378633 PLEKHH2Q8IVE3 1493 aa25.49■■□□□ 1.67
CDK11A-205ENST00000378633 PLXNC1O60486 1568 aa25.49■■□□□ 1.67
CDK11A-205ENST00000378633 ERCC6L2Q5T890 1561 aa25.49■■□□□ 1.67
CDK11A-205ENST00000378633 MYO5CQ9NQX4 1742 aa25.48■■□□□ 1.67
CDK11A-205ENST00000378633 PRAG1Q86YV5 1406 aa25.48■■□□□ 1.67
CDK11A-205ENST00000378633 PLA2R1Q13018 1463 aa25.48■■□□□ 1.67
CDK11A-205ENST00000378633 SMG6Q86US8 1419 aaKnown RBP25.47■■□□□ 1.67
CDK11A-205ENST00000378633 TRPM1Q7Z4N2 1603 aa25.46■■□□□ 1.67
CDK11A-205ENST00000378633 PNISRQ8TF01 805 aaKnown RBP25.45■■□□□ 1.66
CDK11A-205ENST00000378633 IQGAP3Q86VI3 1631 aa25.44■■□□□ 1.66
CDK11A-205ENST00000378633 ANP32EQ9BTT0 268 aa25.44■■□□□ 1.66
CDK11A-205ENST00000378633 E9PCH4 1651 aa25.44■■□□□ 1.66
CDK11A-205ENST00000378633 KTN1Q86UP2 1357 aaKnown RBP25.42■■□□□ 1.66
CDK11A-205ENST00000378633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.42■■□□□ 1.662e-6■■■■□ 19.5
CDK11A-205ENST00000378633 TMC1Q8TDI8 760 aa25.41■■□□□ 1.66
CDK11A-205ENST00000378633 DUOX2Q9NRD8 1548 aa25.41■■□□□ 1.66
CDK11A-205ENST00000378633 A2MP01023 1474 aa25.4■■□□□ 1.66
CDK11A-205ENST00000378633 GPRASP1Q5JY77 1395 aa25.39■■□□□ 1.66
CDK11A-205ENST00000378633 RGL3Q3MIN7 710 aa25.39■■□□□ 1.65
CDK11A-205ENST00000378633 NUDCQ9Y266 331 aa25.39■■□□□ 1.65
CDK11A-205ENST00000378633 MAGI2Q86UL8 1455 aa25.38■■□□□ 1.65
CDK11A-205ENST00000378633 RALBP1Q15311 655 aa25.38■■□□□ 1.65
CDK11A-205ENST00000378633 PLCH2O75038 1416 aa25.38■■□□□ 1.65
CDK11A-205ENST00000378633 MYBBP1AQ9BQG0 1328 aaKnown RBP25.38■■□□□ 1.65
CDK11A-205ENST00000378633 BRD4O60885 1362 aaPredicted RBP25.37■■□□□ 1.65
CDK11A-205ENST00000378633 ERBINQ96RT1 1412 aa25.37■■□□□ 1.65
CDK11A-205ENST00000378633 NBPF1Q3BBV0 1214 aa25.36■■□□□ 1.65
CDK11A-205ENST00000378633 ATP10AO60312 1499 aa25.36■■□□□ 1.65
CDK11A-205ENST00000378633 LRPPRCP42704 1394 aaKnown RBP25.36■■□□□ 1.65
CDK11A-205ENST00000378633 LAMC1P11047 1609 aa25.35■■□□□ 1.65
CDK11A-205ENST00000378633 ZCCHC11Q5TAX3 1644 aaKnown RBP25.34■■□□□ 1.65
CDK11A-205ENST00000378633 RNF123Q5XPI4 1314 aa25.33■■□□□ 1.64
CDK11A-205ENST00000378633 B4GALNT3Q6L9W6 998 aa25.32■■□□□ 1.64
CDK11A-205ENST00000378633 UHRF1BP1LA0JNW5 1464 aa25.32■■□□□ 1.64
CDK11A-205ENST00000378633 PRDM15P57071 1507 aaPredicted RBP25.32■■□□□ 1.64
CDK11A-205ENST00000378633 EFCAB2Q5VUJ9 269 aa25.31■■□□□ 1.64
CDK11A-205ENST00000378633 ABCC1P33527 1531 aa25.3■■□□□ 1.64
CDK11A-205ENST00000378633 EIF2AK4Q9P2K8 1649 aaKnown RBP25.3■■□□□ 1.64
CDK11A-205ENST00000378633 CLASP1Q7Z460 1538 aa25.3■■□□□ 1.64
CDK11A-205ENST00000378633 COL17A1Q9UMD9 1497 aaPredicted RBP25.28■■□□□ 1.64
CDK11A-205ENST00000378633 PARD3Q8TEW0 1356 aa25.27■■□□□ 1.64
CDK11A-205ENST00000378633 TRAPPC8Q9Y2L5 1435 aa25.26■■□□□ 1.63
CDK11A-205ENST00000378633 TESK2Q96S53 571 aa25.26■■□□□ 1.63
CDK11A-205ENST00000378633 FANCIQ9NVI1 1328 aa25.26■■□□□ 1.63
CDK11A-205ENST00000378633 PER1O15534 1290 aaPredicted RBP25.25■■□□□ 1.63
CDK11A-205ENST00000378633 NLRP13Q86W25 1043 aa25.24■■□□□ 1.63
CDK11A-205ENST00000378633 DISP3Q9P2K9 1392 aa25.23■■□□□ 1.63
CDK11A-205ENST00000378633 SENP3-EIF4A1A0A087X0R7 540 aa25.23■■□□□ 1.63
CDK11A-205ENST00000378633 WASHC2CQ9Y4E1 1318 aa25.2■■□□□ 1.62
CDK11A-205ENST00000378633 MSH5O43196 834 aa25.19■■□□□ 1.62
CDK11A-205ENST00000378633 RNF17Q9BXT8 1623 aaKnown RBP25.19■■□□□ 1.62
CDK11A-205ENST00000378633 RTEL1-TNFRSF6BF6WH68 1400 aa25.18■■□□□ 1.62
CDK11A-205ENST00000378633 ARAP3Q8WWN8 1544 aa25.18■■□□□ 1.62
CDK11A-205ENST00000378633 SPAG9O60271 1321 aaKnown RBP25.17■■□□□ 1.62
CDK11A-205ENST00000378633 TMF1P82094 1093 aa25.16■■□□□ 1.62
CDK11A-205ENST00000378633 ZFYVE16Q7Z3T8 1539 aa25.15■■□□□ 1.62
CDK11A-205ENST00000378633 AFAP1Q8N556 730 aa25.12■■□□□ 1.61
CDK11A-205ENST00000378633 PANK3Q9H999 370 aa25.12■■□□□ 1.61
CDK11A-205ENST00000378633 TRPM2O94759 1503 aa25.12■■□□□ 1.61
CDK11A-205ENST00000378633 MADDQ8WXG6 1647 aa25.11■■□□□ 1.61
CDK11A-205ENST00000378633 CC2D1BQ5T0F9 858 aaKnown RBP25.09■■□□□ 1.61
CDK11A-205ENST00000378633 CCDC136Q96JN2 1154 aa25.09■■□□□ 1.61
CDK11A-205ENST00000378633 PTPRTO14522 1441 aa25.09■■□□□ 1.61
CDK11A-205ENST00000378633 DEPDC5O75140 1603 aa25.09■■□□□ 1.61
CDK11A-205ENST00000378633 INSRP06213 1382 aa25.07■■□□□ 1.6
CDK11A-205ENST00000378633 PDE3BQ13370 1112 aa25.07■■□□□ 1.6
CDK11A-205ENST00000378633 CEP152O94986 1710 aa25.06■■□□□ 1.6
CDK11A-205ENST00000378633 SPHKAPQ2M3C7 1700 aa25.06■■□□□ 1.6
CDK11A-205ENST00000378633 IQGAP1P46940 1657 aa25.06■■□□□ 1.6
CDK11A-205ENST00000378633 ZMYM4Q5VZL5 1548 aa25.05■■□□□ 1.6
CDK11A-205ENST00000378633 WDR7Q9Y4E6 1490 aa25.05■■□□□ 1.6
CDK11A-205ENST00000378633 STAC3Q96MF2 364 aa25.05■■□□□ 1.6
CDK11A-205ENST00000378633 CLTCL1P53675 1640 aa25.04■■□□□ 1.6
CDK11A-205ENST00000378633 RRP1P56182 461 aaKnown RBP25.03■■□□□ 1.6
CDK11A-205ENST00000378633 TET3O43151 1660 aa25.03■■□□□ 1.6
CDK11A-205ENST00000378633 ABCA9Q8IUA7 1624 aa25.03■■□□□ 1.6
CDK11A-205ENST00000378633 INO80Q9ULG1 1556 aaPredicted RBP25.03■■□□□ 1.6
CDK11A-205ENST00000378633 ATP7AQ04656 1500 aa25.02■■□□□ 1.6
CDK11A-205ENST00000378633 BLMP54132 1417 aaPredicted RBP25.02■■□□□ 1.6
CDK11A-205ENST00000378633 SALL2Q9Y467 1007 aaPredicted RBP25.02■■□□□ 1.6
CDK11A-205ENST00000378633 FANCAO15360 1455 aa25.02■■□□□ 1.6
CDK11A-205ENST00000378633 SCAPERQ9BY12 1400 aa25.01■■□□□ 1.59
CDK11A-205ENST00000378633 RCAN3Q9UKA8 241 aa25.01■■□□□ 1.59
CDK11A-205ENST00000378633 VWDEQ8N2E2 1590 aa25.01■■□□□ 1.59
CDK11A-205ENST00000378633 SCAF11Q99590 1463 aaKnown RBP24.99■■□□□ 1.59
CDK11A-205ENST00000378633 KANK1Q14678 1352 aa24.99■■□□□ 1.59
CDK11A-205ENST00000378633 CDCA8Q53HL2 280 aa24.94■■□□□ 1.58
CDK11A-205ENST00000378633 CDCA7LQ96GN5 454 aa24.94■■□□□ 1.58
CDK11A-205ENST00000378633 NEURL4Q96JN8 1562 aa24.94■■□□□ 1.58
CDK11A-205ENST00000378633 KIF3BO15066 747 aa24.93■■□□□ 1.58
CDK11A-205ENST00000378633 ADGRL1O94910 1474 aa24.93■■□□□ 1.58
CDK11A-205ENST00000378633 SYNMO15061 1565 aa24.93■■□□□ 1.58
CDK11A-205ENST00000378633 KNSTRNQ9Y448 316 aa24.92■■□□□ 1.58
CDK11A-205ENST00000378633 ERICH6Q7L0X2 663 aa24.91■■□□□ 1.58
CDK11A-205ENST00000378633 EXOC6Q8TAG9 804 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms