RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 ONECUT3O60422 494 aaPredicted RBP8.96□□□□□ -0.98
CDKAL1-202ENST00000378610 VIRMAQ69YN4 1812 aaKnown RBP8.96□□□□□ -0.98
CDKAL1-202ENST00000378610 ARHGEF11O15085 1522 aa8.96□□□□□ -0.98
CDKAL1-202ENST00000378610 ANP32AP39687 249 aaKnown RBP8.95□□□□□ -0.98
CDKAL1-202ENST00000378610 CUL7Q14999 1698 aa8.95□□□□□ -0.98
CDKAL1-202ENST00000378610 FBXW7Q969H0 707 aa8.95□□□□□ -0.98
CDKAL1-202ENST00000378610 AK7Q96M32 723 aa8.95□□□□□ -0.98
CDKAL1-202ENST00000378610 SPINK5Q9NQ38 1064 aaPredicted RBP8.95□□□□□ -0.98
CDKAL1-202ENST00000378610 AKNAQ7Z591 1439 aa8.94□□□□□ -0.98
CDKAL1-202ENST00000378610 ZBTB47Q9UFB7 747 aaPredicted RBP8.94□□□□□ -0.98
CDKAL1-202ENST00000378610 KIF21AQ7Z4S6 1674 aa8.94□□□□□ -0.98
CDKAL1-202ENST00000378610 CTTNBP2Q8WZ74 1663 aa8.94□□□□□ -0.98
CDKAL1-202ENST00000378610 NAIPQ13075 1403 aa8.94□□□□□ -0.98
CDKAL1-202ENST00000378610 PTPRKQ15262 1439 aa8.94□□□□□ -0.98
CDKAL1-202ENST00000378610 A6NJR5 290 aa8.94□□□□□ -0.98
CDKAL1-202ENST00000378610 CCDC184Q52MB2 194 aa8.94□□□□□ -0.98
CDKAL1-202ENST00000378610 RTL5Q5HYW3 569 aaPredicted RBP8.94□□□□□ -0.98
CDKAL1-202ENST00000378610 E9PCH4 1651 aa8.94□□□□□ -0.98
CDKAL1-202ENST00000378610 TONSLQ96HA7 1378 aa8.94□□□□□ -0.98
CDKAL1-202ENST00000378610 FAM117AQ9C073 453 aa8.94□□□□□ -0.98
CDKAL1-202ENST00000378610 THOC2Q8NI27 1593 aaKnown RBP8.93□□□□□ -0.98
CDKAL1-202ENST00000378610 FGD5Q6ZNL6 1462 aa8.93□□□□□ -0.98
CDKAL1-202ENST00000378610 FGD6Q6ZV73 1430 aa8.93□□□□□ -0.98
CDKAL1-202ENST00000378610 RSPH4AQ5TD94 716 aa8.93□□□□□ -0.98
CDKAL1-202ENST00000378610 PRKRIP1Q9H875 184 aaPredicted RBP8.93□□□□□ -0.98
CDKAL1-202ENST00000378610 CASKIN1Q8WXD9 1431 aa8.93□□□□□ -0.98
CDKAL1-202ENST00000378610 ZNF777Q9ULD5 760 aaPredicted RBP8.92□□□□□ -0.98
CDKAL1-202ENST00000378610 SNAPC4Q5SXM2 1469 aa8.92□□□□□ -0.98
CDKAL1-202ENST00000378610 HIRIP3Q9BW71 556 aaPredicted RBP8.92□□□□□ -0.98
CDKAL1-202ENST00000378610 CCDC7Q96M83 1385 aa8.92□□□□□ -0.98
CDKAL1-202ENST00000378610 ARHGEF1Q92888 912 aaKnown RBP8.91□□□□□ -0.98
CDKAL1-202ENST00000378610 RIOK3O14730 519 aaKnown RBP8.91□□□□□ -0.98
CDKAL1-202ENST00000378610 TCOF1Q13428 1488 aaKnown RBP8.91□□□□□ -0.98
CDKAL1-202ENST00000378610 TEX14Q8IWB6 1497 aa8.9□□□□□ -0.98
CDKAL1-202ENST00000378610 DHX29Q7Z478 1369 aaKnown RBP8.9□□□□□ -0.98
CDKAL1-202ENST00000378610 BCORL1Q5H9F3 1711 aa8.9□□□□□ -0.99
CDKAL1-202ENST00000378610 PPM1GO15355 546 aaPredicted RBP8.89□□□□□ -0.99
CDKAL1-202ENST00000378610 MS4A1P11836 297 aa8.89□□□□□ -0.99
CDKAL1-202ENST00000378610 PDE4CQ08493 712 aa8.89□□□□□ -0.99
CDKAL1-202ENST00000378610 NUDCQ9Y266 331 aa8.89□□□□□ -0.99
CDKAL1-202ENST00000378610 SAMD9Q5K651 1589 aa8.89□□□□□ -0.99
CDKAL1-202ENST00000378610 DNMBPQ6XZF7 1577 aa8.89□□□□□ -0.99
CDKAL1-202ENST00000378610 PABPN1Q86U42 306 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDKAL1-202ENST00000378610 SUPT6HQ7KZ85 1726 aaKnown RBP8.88□□□□□ -0.99
CDKAL1-202ENST00000378610 IGF1RP08069 1367 aa8.88□□□□□ -0.99
CDKAL1-202ENST00000378610 PDE4DQ08499 809 aa8.88□□□□□ -0.99
CDKAL1-202ENST00000378610 CWC22Q9HCG8 908 aaKnown RBP8.88□□□□□ -0.99
CDKAL1-202ENST00000378610 MBD5Q9P267 1494 aa8.88□□□□□ -0.99
CDKAL1-202ENST00000378610 STAG3Q9UJ98 1225 aa8.88□□□□□ -0.99
CDKAL1-202ENST00000378610 KDM6BO15054 1643 aa8.88□□□□□ -0.99
CDKAL1-202ENST00000378610 ZMYM4Q5VZL5 1548 aa8.88□□□□□ -0.99
CDKAL1-202ENST00000378610 ABCA10Q8WWZ4 1543 aa8.88□□□□□ -0.99
CDKAL1-202ENST00000378610 TCERG1O14776 1098 aaKnown RBP8.87□□□□□ -0.99
CDKAL1-202ENST00000378610 HSPA5P11021 654 aaKnown RBP8.87□□□□□ -0.99
CDKAL1-202ENST00000378610 FAM43AQ8N2R8 423 aa8.87□□□□□ -0.99
CDKAL1-202ENST00000378610 BACH2Q9BYV9 841 aa8.87□□□□□ -0.99
CDKAL1-202ENST00000378610 LRPPRCP42704 1394 aaKnown RBP8.87□□□□□ -0.99
CDKAL1-202ENST00000378610 GSE1Q14687 1217 aa8.87□□□□□ -0.99
CDKAL1-202ENST00000378610 UGGT2Q9NYU1 1516 aa8.87□□□□□ -0.99
CDKAL1-202ENST00000378610 FMN1Q68DA7 1419 aa8.86□□□□□ -0.99
CDKAL1-202ENST00000378610 MIA2Q96PC5 1412 aa8.86□□□□□ -0.99
CDKAL1-202ENST00000378610 PLEKHG3A1L390 1219 aa8.86□□□□□ -0.99
CDKAL1-202ENST00000378610 KDM5CP41229 1560 aa8.86□□□□□ -0.99
CDKAL1-202ENST00000378610 TAF7LQ5H9L4 462 aa8.86□□□□□ -0.99
CDKAL1-202ENST00000378610 TRIM66O15016 1216 aa8.85□□□□□ -0.99
CDKAL1-202ENST00000378610 NEFMP07197 916 aa8.85□□□□□ -0.99
CDKAL1-202ENST00000378610 CADPSQ9ULU8 1353 aa8.85□□□□□ -0.99
CDKAL1-202ENST00000378610 KIF14Q15058 1648 aa8.85□□□□□ -0.99
CDKAL1-202ENST00000378610 MYOM3Q5VTT5 1437 aa8.85□□□□□ -0.99
CDKAL1-202ENST00000378610 BRPF3Q9ULD4 1205 aa8.85□□□□□ -0.99
CDKAL1-202ENST00000378610 RPRD2Q5VT52 1461 aaKnown RBP8.85□□□□□ -0.99
CDKAL1-202ENST00000378610 CCDC97Q96F63 343 aaPredicted RBP8.84□□□□□ -0.99
CDKAL1-202ENST00000378610 RYDENQ9NUL5 291 aaKnown RBP8.84□□□□□ -0.99
CDKAL1-202ENST00000378610 EHBP1L1Q8N3D4 1523 aa8.84□□□□□ -0.99
CDKAL1-202ENST00000378610 PKNOX2Q96KN3 472 aa8.83□□□□□ -1
CDKAL1-202ENST00000378610 ABCB7O75027 752 aa8.83□□□□□ -1
CDKAL1-202ENST00000378610 BCL11BQ9C0K0 894 aaPredicted RBP8.83□□□□□ -1
CDKAL1-202ENST00000378610 SERPINA10Q9UK55 444 aa8.83□□□□□ -1
CDKAL1-202ENST00000378610 INSRP06213 1382 aa8.83□□□□□ -1
CDKAL1-202ENST00000378610 KRI1Q8N9T8 703 aaKnown RBP8.83□□□□□ -1
CDKAL1-202ENST00000378610 STK24Q9Y6E0 443 aa8.83□□□□□ -1
CDKAL1-202ENST00000378610 GRIN2BQ13224 1484 aa8.82□□□□□ -1
CDKAL1-202ENST00000378610 PDE4AP27815 886 aa8.82□□□□□ -1
CDKAL1-202ENST00000378610 CCDC125Q86Z20 511 aa8.82□□□□□ -1
CDKAL1-202ENST00000378610 EIF4G2P78344 907 aaKnown RBP eCLIP8.81□□□□□ -1
CDKAL1-202ENST00000378610 CARMIL1Q5VZK9 1371 aa8.81□□□□□ -1
CDKAL1-202ENST00000378610 MRS2Q9HD23 443 aa8.8□□□□□ -1
CDKAL1-202ENST00000378610 ARID4BQ4LE39 1312 aaPredicted RBP8.8□□□□□ -1
CDKAL1-202ENST00000378610 KIF7Q2M1P5 1343 aa8.79□□□□□ -1
CDKAL1-202ENST00000378610 LAMC3Q9Y6N6 1575 aa8.79□□□□□ -1
CDKAL1-202ENST00000378610 NFKBIBQ15653 356 aa8.79□□□□□ -1
CDKAL1-202ENST00000378610 PROSER2Q86WR7 435 aaPredicted RBP8.79□□□□□ -1
CDKAL1-202ENST00000378610 DDRGK1Q96HY6 314 aa8.79□□□□□ -1
CDKAL1-202ENST00000378610 FRAT1Q92837 279 aaPredicted RBP8.78□□□□□ -1
CDKAL1-202ENST00000378610 KTN1Q86UP2 1357 aaKnown RBP8.78□□□□□ -1
CDKAL1-202ENST00000378610 VGFO15240 615 aaPredicted RBP8.78□□□□□ -1
CDKAL1-202ENST00000378610 AMOTL2Q9Y2J4 779 aa8.78□□□□□ -1
CDKAL1-202ENST00000378610 GAPVD1Q14C86 1478 aa8.78□□□□□ -1
CDKAL1-202ENST00000378610 MAGI3Q5TCQ9 1506 aa8.78□□□□□ -1
CDKAL1-202ENST00000378610 UNCXA6NJT0 531 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms