RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 KAT6BQ8WYB5 2073 aa13.98□□□□□ -0.17
ITM2B-202ENST00000378565 PDE3BQ13370 1112 aa13.97□□□□□ -0.17
ITM2B-202ENST00000378565 TAF3Q5VWG9 929 aa13.97□□□□□ -0.17
ITM2B-202ENST00000378565 TNIKQ9UKE5 1360 aa13.97□□□□□ -0.17
ITM2B-202ENST00000378565 PRKCSHP14314 528 aaPredicted RBP13.97□□□□□ -0.17
ITM2B-202ENST00000378565 SMC4Q9NTJ3 1288 aa13.97□□□□□ -0.17
ITM2B-202ENST00000378565 IFT57Q9NWB7 429 aa13.97□□□□□ -0.17
ITM2B-202ENST00000378565 CFDP1Q9UEE9 299 aaPredicted RBP13.97□□□□□ -0.17
ITM2B-202ENST00000378565 CHMP4AQ9BY43 222 aa13.97□□□□□ -0.17
ITM2B-202ENST00000378565 HDAC5Q9UQL6 1122 aa13.96□□□□□ -0.17
ITM2B-202ENST00000378565 ANKRD20A12PQ8NF67 263 aa13.96□□□□□ -0.17
ITM2B-202ENST00000378565 MNS1Q8NEH6 495 aa13.96□□□□□ -0.17
ITM2B-202ENST00000378565 CCDC39Q9UFE4 941 aa13.96□□□□□ -0.17
ITM2B-202ENST00000378565 CENPJQ9HC77 1338 aaPredicted RBP13.96□□□□□ -0.17
ITM2B-202ENST00000378565 NASPP49321 788 aaPredicted RBP13.96□□□□□ -0.18
ITM2B-202ENST00000378565 SETD5Q9C0A6 1442 aa13.95□□□□□ -0.18
ITM2B-202ENST00000378565 FHAD1B1AJZ9 1412 aa13.95□□□□□ -0.18
ITM2B-202ENST00000378565 DCAF11Q8TEB1 546 aa13.94□□□□□ -0.18
ITM2B-202ENST00000378565 HOOK1Q9UJC3 728 aaKnown RBP13.94□□□□□ -0.18
ITM2B-202ENST00000378565 LEKR1Q6ZMV7 388 aa13.94□□□□□ -0.18
ITM2B-202ENST00000378565 HMGN5P82970 282 aaKnown RBP13.93□□□□□ -0.18
ITM2B-202ENST00000378565 RRP9O43818 475 aaKnown RBP13.93□□□□□ -0.18
ITM2B-202ENST00000378565 ROCK2O75116 1388 aaKnown RBP13.92□□□□□ -0.18
ITM2B-202ENST00000378565 EIF3AQ14152 1382 aaKnown RBP13.92□□□□□ -0.18
ITM2B-202ENST00000378565 HSPA5P11021 654 aaKnown RBP13.92□□□□□ -0.18
ITM2B-202ENST00000378565 GORABQ5T7V8 394 aa13.92□□□□□ -0.18
ITM2B-202ENST00000378565 SPAG9O60271 1321 aaKnown RBP13.92□□□□□ -0.18
ITM2B-202ENST00000378565 PLEKHD1A6NEE1 506 aa13.92□□□□□ -0.18
ITM2B-202ENST00000378565 MRE11P49959 708 aa13.91□□□□□ -0.18
ITM2B-202ENST00000378565 ARHGAP35Q9NRY4 1499 aa13.91□□□□□ -0.18
ITM2B-202ENST00000378565 STK31Q9BXU1 1019 aa13.91□□□□□ -0.18
ITM2B-202ENST00000378565 FAM184AQ8NB25 1140 aa13.91□□□□□ -0.18
ITM2B-202ENST00000378565 R3HCC1Q9Y3T6 440 aaKnown RBP13.91□□□□□ -0.18
ITM2B-202ENST00000378565 SLC4A3P48751 1232 aa13.91□□□□□ -0.18
ITM2B-202ENST00000378565 ERCC4Q92889 916 aaPredicted RBP13.91□□□□□ -0.18
ITM2B-202ENST00000378565 REC8O95072 547 aa13.9□□□□□ -0.18
ITM2B-202ENST00000378565 KANK1Q14678 1352 aa13.9□□□□□ -0.18
ITM2B-202ENST00000378565 U2AF1L5P0DN76 240 aaPredicted RBP13.9□□□□□ -0.18
ITM2B-202ENST00000378565 U2AF1Q01081 240 aaKnown RBP eCLIP13.9□□□□□ -0.18
ITM2B-202ENST00000378565 FOXD4L6Q3SYB3 417 aaPredicted RBP13.89□□□□□ -0.19
ITM2B-202ENST00000378565 LMOD2Q6P5Q4 547 aa13.89□□□□□ -0.19
ITM2B-202ENST00000378565 FOXD4L3Q6VB84 417 aaPredicted RBP13.89□□□□□ -0.19
ITM2B-202ENST00000378565 HSP90AB3PQ58FF7 597 aa13.89□□□□□ -0.19
ITM2B-202ENST00000378565 SRPK2P78362 688 aaKnown RBP13.89□□□□□ -0.19
ITM2B-202ENST00000378565 CHMP5Q9NZZ3 219 aa13.89□□□□□ -0.19
ITM2B-202ENST00000378565 ZBED9Q6R2W3 1325 aa13.88□□□□□ -0.19
ITM2B-202ENST00000378565 ANO8Q9HCE9 1232 aaPredicted RBP13.88□□□□□ -0.19
ITM2B-202ENST00000378565 MCTP1Q6DN14 999 aa13.88□□□□□ -0.19
ITM2B-202ENST00000378565 NAT10Q9H0A0 1025 aaKnown RBP13.88□□□□□ -0.19
ITM2B-202ENST00000378565 CGNL1Q0VF96 1302 aa13.87□□□□□ -0.19
ITM2B-202ENST00000378565 KIF27Q86VH2 1401 aa13.86□□□□□ -0.19
ITM2B-202ENST00000378565 PCMTD1Q96MG8 357 aaPredicted RBP13.86□□□□□ -0.19
ITM2B-202ENST00000378565 NUCB2P80303 420 aa13.86□□□□□ -0.19
ITM2B-202ENST00000378565 USP8P40818 1118 aa13.86□□□□□ -0.19
ITM2B-202ENST00000378565 SASS6Q6UVJ0 657 aa13.86□□□□□ -0.19
ITM2B-202ENST00000378565 MYO6Q9UM54 1294 aa13.86□□□□□ -0.19
ITM2B-202ENST00000378565 NLRP13Q86W25 1043 aa13.85□□□□□ -0.19
ITM2B-202ENST00000378565 DEF6Q9H4E7 631 aa13.85□□□□□ -0.19
ITM2B-202ENST00000378565 CHMP7Q8WUX9 453 aaPredicted RBP13.85□□□□□ -0.19
ITM2B-202ENST00000378565 NFKBIBQ15653 356 aa13.85□□□□□ -0.19
ITM2B-202ENST00000378565 TSPYL1Q9H0U9 437 aa13.84□□□□□ -0.19
ITM2B-202ENST00000378565 CCP110O43303 1012 aa13.84□□□□□ -0.19
ITM2B-202ENST00000378565 KIAA0754O94854 1291 aa13.84□□□□□ -0.19
ITM2B-202ENST00000378565 BICD2Q8TD16 824 aa13.84□□□□□ -0.19
ITM2B-202ENST00000378565 CHMP3Q9Y3E7 222 aa13.84□□□□□ -0.19
ITM2B-202ENST00000378565 KIF15Q9NS87 1388 aa13.84□□□□□ -0.19
ITM2B-202ENST00000378565 CLUAP1Q96AJ1 413 aa13.84□□□□□ -0.19
ITM2B-202ENST00000378565 STK11IPQ8N1F8 1099 aa13.84□□□□□ -0.19
ITM2B-202ENST00000378565 MARCH6O60337 910 aa13.84□□□□□ -0.19
ITM2B-202ENST00000378565 INCENPQ9NQS7 918 aa13.84□□□□□ -0.19
ITM2B-202ENST00000378565 RRP1P56182 461 aaKnown RBP13.83□□□□□ -0.2
ITM2B-202ENST00000378565 AKAP17AQ02040 695 aaKnown RBP13.83□□□□□ -0.2
ITM2B-202ENST00000378565 VPS53Q5VIR6 699 aa13.83□□□□□ -0.2
ITM2B-202ENST00000378565 CAGE1Q8TC20 777 aa13.83□□□□□ -0.2
ITM2B-202ENST00000378565 GOLGA6L7A0A1B0GV03 622 aa13.83□□□□□ -0.2
ITM2B-202ENST00000378565 PLCD4Q9BRC7 762 aa13.82□□□□□ -0.2
ITM2B-202ENST00000378565 CCDC173Q0VFZ6 552 aa13.82□□□□□ -0.2
ITM2B-202ENST00000378565 DYDC1Q8WWB3 177 aa13.82□□□□□ -0.2
ITM2B-202ENST00000378565 HDGFL2Q7Z4V5 671 aaPredicted RBP13.82□□□□□ -0.2
ITM2B-202ENST00000378565 NAP1L1P55209 391 aaKnown RBP13.81□□□□□ -0.2
ITM2B-202ENST00000378565 KCNH8Q96L42 1107 aa13.81□□□□□ -0.2
ITM2B-202ENST00000378565 LMOD3Q0VAK6 560 aa13.81□□□□□ -0.2
ITM2B-202ENST00000378565 BRPF3Q9ULD4 1205 aa13.81□□□□□ -0.2
ITM2B-202ENST00000378565 RILPL2Q969X0 211 aa13.8□□□□□ -0.2
ITM2B-202ENST00000378565 ANKRD45Q5TZF3 282 aa13.8□□□□□ -0.2
ITM2B-202ENST00000378565 FBXO3Q9UK99 471 aa13.8□□□□□ -0.2
ITM2B-202ENST00000378565 ZRSR2Q15696 482 aaKnown RBP13.8□□□□□ -0.2
ITM2B-202ENST00000378565 AXDND1Q5T1B0 1012 aaPredicted RBP13.8□□□□□ -0.2
ITM2B-202ENST00000378565 WRNQ14191 1432 aaPredicted RBP eCLIP13.8□□□□□ -0.2
ITM2B-202ENST00000378565 ZKSCAN1P17029 563 aaPredicted RBP13.8□□□□□ -0.2
ITM2B-202ENST00000378565 SLC4A10Q6U841 1118 aa13.8□□□□□ -0.2
ITM2B-202ENST00000378565 SOX12O15370 315 aa13.79□□□□□ -0.2
ITM2B-202ENST00000378565 CCDC47Q96A33 483 aaKnown RBP13.79□□□□□ -0.2
ITM2B-202ENST00000378565 LETM1O95202 739 aaPredicted RBP13.79□□□□□ -0.2
ITM2B-202ENST00000378565 TRIM29Q14134 588 aa13.79□□□□□ -0.2
ITM2B-202ENST00000378565 TOMM22Q9NS69 142 aa13.79□□□□□ -0.2
ITM2B-202ENST00000378565 RUFY2Q8WXA3 655 aa13.79□□□□□ -0.2
ITM2B-202ENST00000378565 LRRFIP1Q32MZ4 808 aaKnown RBP13.78□□□□□ -0.2
ITM2B-202ENST00000378565 GOLGA6L10A6NI86 522 aa13.78□□□□□ -0.2
ITM2B-202ENST00000378565 CPLX2Q6PUV4 134 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms