RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 NLRP13Q86W25 1043 aa18.25■□□□□ 0.51
PRDM16-203ENST00000378391 EFCAB5A4FU69 1503 aa18.25■□□□□ 0.51
PRDM16-203ENST00000378391 SLKQ9H2G2 1235 aaPredicted RBP18.24■□□□□ 0.51
PRDM16-203ENST00000378391 PMFBP1Q8TBY8 1022 aa18.24■□□□□ 0.51
PRDM16-203ENST00000378391 ERCC6Q03468 1493 aa18.24■□□□□ 0.51
PRDM16-203ENST00000378391 SRPK2P78362 688 aaKnown RBP18.23■□□□□ 0.51
PRDM16-203ENST00000378391 NUP155O75694 1391 aa18.22■□□□□ 0.51
PRDM16-203ENST00000378391 NAIPQ13075 1403 aa18.22■□□□□ 0.51
PRDM16-203ENST00000378391 PLIN1O60240 522 aa18.22■□□□□ 0.51
PRDM16-203ENST00000378391 SMG6Q86US8 1419 aaKnown RBP18.21■□□□□ 0.51
PRDM16-203ENST00000378391 ST20-MTHFSA0A0A6YYL1 179 aa18.21■□□□□ 0.51
PRDM16-203ENST00000378391 CALD1Q05682 793 aaKnown RBP18.21■□□□□ 0.51
PRDM16-203ENST00000378391 GOLGA2Q08379 1002 aa18.21■□□□□ 0.51
PRDM16-203ENST00000378391 ANKRD30AQ9BXX3 1397 aa18.2■□□□□ 0.5
PRDM16-203ENST00000378391 NBPF8Q3BBV2 869 aa18.2■□□□□ 0.5
PRDM16-203ENST00000378391 SLC4A3P48751 1232 aa18.19■□□□□ 0.5
PRDM16-203ENST00000378391 GOLGA6L3A6NEY3 463 aa18.19■□□□□ 0.5
PRDM16-203ENST00000378391 GZF1Q9H116 711 aaPredicted RBP18.19■□□□□ 0.5
PRDM16-203ENST00000378391 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
PRDM16-203ENST00000378391 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.5
PRDM16-203ENST00000378391 GSE1Q14687 1217 aa18.18■□□□□ 0.5
PRDM16-203ENST00000378391 KIAA2012Q0VF49 1180 aa18.18■□□□□ 0.5
PRDM16-203ENST00000378391 HMGXB3Q12766 1538 aa18.17■□□□□ 0.5
PRDM16-203ENST00000378391 CRBNQ96SW2 442 aa18.17■□□□□ 0.5
PRDM16-203ENST00000378391 NAP1L2Q9ULW6 460 aaPredicted RBP18.17■□□□□ 0.5
PRDM16-203ENST00000378391 C11orf95C9JLR9 678 aaPredicted RBP18.17■□□□□ 0.5
PRDM16-203ENST00000378391 PDE4CQ08493 712 aa18.16■□□□□ 0.5
PRDM16-203ENST00000378391 ITPRIPQ8IWB1 547 aa18.16■□□□□ 0.5
PRDM16-203ENST00000378391 DRC7Q8IY82 874 aa18.16■□□□□ 0.5
PRDM16-203ENST00000378391 HDGFP51858 240 aaKnown RBP18.15■□□□□ 0.5
PRDM16-203ENST00000378391 KIAA1211Q6ZU35 1233 aa18.15■□□□□ 0.5
PRDM16-203ENST00000378391 HDGFL2Q7Z4V5 671 aaPredicted RBP18.15■□□□□ 0.5
PRDM16-203ENST00000378391 EHBP1L1Q8N3D4 1523 aa18.15■□□□□ 0.5
PRDM16-203ENST00000378391 SYAP1Q96A49 352 aaPredicted RBP18.15■□□□□ 0.5
PRDM16-203ENST00000378391 RTF1Q92541 710 aaKnown RBP18.14■□□□□ 0.49
PRDM16-203ENST00000378391 PTPN23Q9H3S7 1636 aa18.13■□□□□ 0.49
PRDM16-203ENST00000378391 IL27Q8NEV9 243 aa18.13■□□□□ 0.49
PRDM16-203ENST00000378391 LMOD2Q6P5Q4 547 aa18.12■□□□□ 0.49
PRDM16-203ENST00000378391 SETQ01105 290 aaPredicted RBP18.12■□□□□ 0.49
PRDM16-203ENST00000378391 SUPT6HQ7KZ85 1726 aaKnown RBP18.11■□□□□ 0.49
PRDM16-203ENST00000378391 ZNF644Q9H582 1327 aaPredicted RBP18.11■□□□□ 0.49
PRDM16-203ENST00000378391 MFAP1P55081 439 aaKnown RBP18.11■□□□□ 0.49
PRDM16-203ENST00000378391 ANO8Q9HCE9 1232 aaPredicted RBP18.1■□□□□ 0.49
PRDM16-203ENST00000378391 AQRO60306 1485 aaKnown RBP eCLIP18.1■□□□□ 0.49
PRDM16-203ENST00000378391 SAFB2Q14151 953 aaKnown RBP eCLIP18.1■□□□□ 0.49
PRDM16-203ENST00000378391 CENPQQ7L2Z9 268 aaPredicted RBP18.1■□□□□ 0.49
PRDM16-203ENST00000378391 TAOK2Q9UL54 1235 aa18.1■□□□□ 0.49
PRDM16-203ENST00000378391 APBB1O00213 710 aa18.09■□□□□ 0.49
PRDM16-203ENST00000378391 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
PRDM16-203ENST00000378391 EIF3AQ14152 1382 aaKnown RBP18.09■□□□□ 0.49
PRDM16-203ENST00000378391 CENPJQ9HC77 1338 aaPredicted RBP18.09■□□□□ 0.49
PRDM16-203ENST00000378391 PNISRQ8TF01 805 aaKnown RBP18.09■□□□□ 0.49
PRDM16-203ENST00000378391 SMC4Q9NTJ3 1288 aa18.09■□□□□ 0.49
PRDM16-203ENST00000378391 BRD4O60885 1362 aaPredicted RBP18.08■□□□□ 0.49
PRDM16-203ENST00000378391 GAPVD1Q14C86 1478 aa18.08■□□□□ 0.49
PRDM16-203ENST00000378391 NCOA1Q15788 1441 aa18.08■□□□□ 0.48
PRDM16-203ENST00000378391 CARMIL2Q6F5E8 1435 aa18.07■□□□□ 0.48
PRDM16-203ENST00000378391 HTATSF1O43719 755 aaKnown RBP18.07■□□□□ 0.48
PRDM16-203ENST00000378391 CHMP4AQ9BY43 222 aa18.07■□□□□ 0.48
PRDM16-203ENST00000378391 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
PRDM16-203ENST00000378391 PANK3Q9H999 370 aa18.05■□□□□ 0.48
PRDM16-203ENST00000378391 BACH2Q9BYV9 841 aa18.05■□□□□ 0.48
PRDM16-203ENST00000378391 NFKBIBQ15653 356 aa18.04■□□□□ 0.48
PRDM16-203ENST00000378391 PTPRKQ15262 1439 aa18.04■□□□□ 0.48
PRDM16-203ENST00000378391 SOX12O15370 315 aa18.04■□□□□ 0.48
PRDM16-203ENST00000378391 HMMRO75330 724 aa18.04■□□□□ 0.48
PRDM16-203ENST00000378391 CLUAP1Q96AJ1 413 aa18.04■□□□□ 0.48
PRDM16-203ENST00000378391 EFCAB2Q5VUJ9 269 aa18.03■□□□□ 0.48
PRDM16-203ENST00000378391 CDCA7LQ96GN5 454 aa18.03■□□□□ 0.48
PRDM16-203ENST00000378391 STK26Q9P289 416 aa18.03■□□□□ 0.48
PRDM16-203ENST00000378391 RSPH4AQ5TD94 716 aa18.03■□□□□ 0.48
PRDM16-203ENST00000378391 GGT6Q6P531 493 aa18.03■□□□□ 0.48
PRDM16-203ENST00000378391 CCDC146Q8IYE0 955 aa18.02■□□□□ 0.47
PRDM16-203ENST00000378391 CFAP43Q8NDM7 1665 aa18.01■□□□□ 0.47
PRDM16-203ENST00000378391 DDX11L8A8MPP1 907 aa18.01■□□□□ 0.47
PRDM16-203ENST00000378391 MIA2Q96PC5 1412 aa18.01■□□□□ 0.47
PRDM16-203ENST00000378391 STK11IPQ8N1F8 1099 aa18■□□□□ 0.47
PRDM16-203ENST00000378391 HNRNPMP52272 730 aaKnown RBP eCLIP18■□□□□ 0.47
PRDM16-203ENST00000378391 GOLGA6L1Q8N7Z2 621 aa17.99■□□□□ 0.47
PRDM16-203ENST00000378391 STK31Q9BXU1 1019 aa17.99■□□□□ 0.47
PRDM16-203ENST00000378391 TERF2IPQ9NYB0 399 aa17.99■□□□□ 0.47
PRDM16-203ENST00000378391 CSPP1Q1MSJ5 1256 aa17.99■□□□□ 0.47
PRDM16-203ENST00000378391 BRPF3Q9ULD4 1205 aa17.99■□□□□ 0.47
PRDM16-203ENST00000378391 POLA1P09884 1462 aaPredicted RBP17.99■□□□□ 0.47
PRDM16-203ENST00000378391 HDAC5Q9UQL6 1122 aa17.99■□□□□ 0.47
PRDM16-203ENST00000378391 GNL2Q13823 731 aaKnown RBP17.98■□□□□ 0.47
PRDM16-203ENST00000378391 PATL2C9JE40 543 aaKnown RBP17.98■□□□□ 0.47
PRDM16-203ENST00000378391 ST18O60284 1047 aa17.97■□□□□ 0.47
PRDM16-203ENST00000378391 ANKRD30BQ9BXX2 1392 aa17.97■□□□□ 0.47
PRDM16-203ENST00000378391 CCDC144AA2RUR9 1427 aa17.96■□□□□ 0.47
PRDM16-203ENST00000378391 DAPK1P53355 1430 aa17.96■□□□□ 0.47
PRDM16-203ENST00000378391 LMOD3Q0VAK6 560 aa17.96■□□□□ 0.47
PRDM16-203ENST00000378391 SPAG9O60271 1321 aaKnown RBP17.96■□□□□ 0.47
PRDM16-203ENST00000378391 CGNL1Q0VF96 1302 aa17.96■□□□□ 0.47
PRDM16-203ENST00000378391 TOPBP1Q92547 1522 aa17.96■□□□□ 0.46
PRDM16-203ENST00000378391 PHF14O94880 888 aa17.95■□□□□ 0.46
PRDM16-203ENST00000378391 ZNF771Q7L3S4 317 aaPredicted RBP17.95■□□□□ 0.46
PRDM16-203ENST00000378391 HECW1Q76N89 1606 aa17.95■□□□□ 0.46
PRDM16-203ENST00000378391 TULP1O00294 542 aaPredicted RBP17.94■□□□□ 0.46
PRDM16-203ENST00000378391 MEX3CQ5U5Q3 659 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms