RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 HTATSF1O43719 755 aaKnown RBP20.34■□□□□ 0.85
RGP1-201ENST00000378078 HSPA5P11021 654 aaKnown RBP20.34■□□□□ 0.85
RGP1-201ENST00000378078 MCTP1Q6DN14 999 aa20.34■□□□□ 0.85
RGP1-201ENST00000378078 EIF2S2P20042 333 aaKnown RBP20.32■□□□□ 0.84
RGP1-201ENST00000378078 TPM3P06753 285 aa20.32■□□□□ 0.84
RGP1-201ENST00000378078 PKD2Q13563 968 aa20.31■□□□□ 0.84
RGP1-201ENST00000378078 DCAF1Q9Y4B6 1507 aa20.3■□□□□ 0.84
RGP1-201ENST00000378078 SLC4A3P48751 1232 aa20.3■□□□□ 0.84
RGP1-201ENST00000378078 EID1Q9Y6B2 187 aa20.3■□□□□ 0.84
RGP1-201ENST00000378078 KTN1Q86UP2 1357 aaKnown RBP20.3■□□□□ 0.84
RGP1-201ENST00000378078 APPP05067 770 aa20.3■□□□□ 0.84
RGP1-201ENST00000378078 GOLGA3Q08378 1498 aa20.29■□□□□ 0.84
RGP1-201ENST00000378078 BCL2L13Q9BXK5 485 aa20.29■□□□□ 0.84
RGP1-201ENST00000378078 ZNF428Q96B54 188 aa20.29■□□□□ 0.84
RGP1-201ENST00000378078 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.28■□□□□ 0.847e-7■■■■■ 130
RGP1-201ENST00000378078 AKAP17AQ02040 695 aaKnown RBP20.28■□□□□ 0.84
RGP1-201ENST00000378078 RWDD1Q9H446 243 aaPredicted RBP20.28■□□□□ 0.84
RGP1-201ENST00000378078 KIF16BQ96L93 1317 aa20.28■□□□□ 0.84
RGP1-201ENST00000378078 VPS37DQ86XT2 251 aa20.28■□□□□ 0.84
RGP1-201ENST00000378078 ZNF592Q92610 1267 aa20.27■□□□□ 0.83
RGP1-201ENST00000378078 SYAP1Q96A49 352 aaPredicted RBP20.26■□□□□ 0.83
RGP1-201ENST00000378078 RCAN3Q9UKA8 241 aa20.26■□□□□ 0.83
RGP1-201ENST00000378078 FAM184AQ8NB25 1140 aa20.25■□□□□ 0.83
RGP1-201ENST00000378078 NOL10Q9BSC4 688 aaKnown RBP20.25■□□□□ 0.83
RGP1-201ENST00000378078 C1orf141Q5JVX7 400 aa20.25■□□□□ 0.83
RGP1-201ENST00000378078 TRAK1Q9UPV9 953 aa20.24■□□□□ 0.83
RGP1-201ENST00000378078 TCERG1O14776 1098 aaKnown RBP20.24■□□□□ 0.83
RGP1-201ENST00000378078 CALD1Q05682 793 aaKnown RBP20.23■□□□□ 0.83
RGP1-201ENST00000378078 FAM177BA6PVY3 158 aa20.22■□□□□ 0.83
RGP1-201ENST00000378078 KIF3BO15066 747 aa20.21■□□□□ 0.83
RGP1-201ENST00000378078 CCDC34Q96HJ3 373 aa20.21■□□□□ 0.83
RGP1-201ENST00000378078 HNRNPMP52272 730 aaKnown RBP eCLIP20.21■□□□□ 0.83
RGP1-201ENST00000378078 TSR1Q2NL82 804 aaKnown RBP20.21■□□□□ 0.83
RGP1-201ENST00000378078 MYO15BQ96JP2 1530 aa20.2■□□□□ 0.82
RGP1-201ENST00000378078 PLIN1O60240 522 aa20.19■□□□□ 0.82
RGP1-201ENST00000378078 GOLGA6L3A6NEY3 463 aa20.19■□□□□ 0.82
RGP1-201ENST00000378078 SKIDA1Q1XH10 827 aa20.18■□□□□ 0.82
RGP1-201ENST00000378078 TPM2P07951 284 aa20.18■□□□□ 0.82
RGP1-201ENST00000378078 AMOTL1Q8IY63 956 aa20.18■□□□□ 0.82
RGP1-201ENST00000378078 IBSPP21815 317 aaPredicted RBP20.18■□□□□ 0.82
RGP1-201ENST00000378078 ANKRD45Q5TZF3 282 aa20.18■□□□□ 0.82
RGP1-201ENST00000378078 HMMRO75330 724 aa20.17■□□□□ 0.82
RGP1-201ENST00000378078 CCDC43Q96MW1 224 aaKnown RBP20.17■□□□□ 0.82
RGP1-201ENST00000378078 CFAP44Q96MT7 982 aa20.17■□□□□ 0.82
RGP1-201ENST00000378078 PMFBP1Q8TBY8 1022 aa20.16■□□□□ 0.82
RGP1-201ENST00000378078 RBM19Q9Y4C8 960 aaKnown RBP20.16■□□□□ 0.82
RGP1-201ENST00000378078 CCDC27Q2M243 656 aa20.16■□□□□ 0.82
RGP1-201ENST00000378078 NUTM2GQ5VZR2 741 aa20.15■□□□□ 0.82
RGP1-201ENST00000378078 CCDC180Q9P1Z9 1646 aa20.15■□□□□ 0.82
RGP1-201ENST00000378078 PTMSP20962 102 aa20.15■□□□□ 0.82
RGP1-201ENST00000378078 SYNE3Q6ZMZ3 975 aa20.15■□□□□ 0.82
RGP1-201ENST00000378078 NAP1L1P55209 391 aaKnown RBP20.15■□□□□ 0.82
RGP1-201ENST00000378078 CSPP1Q1MSJ5 1256 aa20.15■□□□□ 0.82
RGP1-201ENST00000378078 NFXL1Q6ZNB6 911 aa20.15■□□□□ 0.82
RGP1-201ENST00000378078 BAZ1BQ9UIG0 1483 aaKnown RBP20.15■□□□□ 0.82
RGP1-201ENST00000378078 WASHC2CQ9Y4E1 1318 aa20.15■□□□□ 0.82
RGP1-201ENST00000378078 ZFYVE27Q5T4F4 411 aa20.14■□□□□ 0.81
RGP1-201ENST00000378078 TTC5Q8N0Z6 440 aa20.14■□□□□ 0.81
RGP1-201ENST00000378078 ANO2Q9NQ90 1003 aa20.13■□□□□ 0.81
RGP1-201ENST00000378078 TMEM132AQ24JP5 1023 aa20.13■□□□□ 0.81
RGP1-201ENST00000378078 STK11IPQ8N1F8 1099 aa20.12■□□□□ 0.81
RGP1-201ENST00000378078 KIF27Q86VH2 1401 aa20.12■□□□□ 0.81
RGP1-201ENST00000378078 GOLGA6L19H0YKK7 550 aa20.12■□□□□ 0.81
RGP1-201ENST00000378078 USP35Q9P2H5 1018 aa20.11■□□□□ 0.81
RGP1-201ENST00000378078 TERF2IPQ9NYB0 399 aa20.11■□□□□ 0.81
RGP1-201ENST00000378078 IKQ13123 557 aaPredicted RBP20.1■□□□□ 0.81
RGP1-201ENST00000378078 C9orf78Q9NZ63 289 aaPredicted RBP20.1■□□□□ 0.81
RGP1-201ENST00000378078 RBM33Q96EV2 1170 aaKnown RBP20.09■□□□□ 0.81
RGP1-201ENST00000378078 TRIM29Q14134 588 aa20.09■□□□□ 0.81
RGP1-201ENST00000378078 SETQ01105 290 aaPredicted RBP20.09■□□□□ 0.81
RGP1-201ENST00000378078 AIMP1Q12904 312 aaKnown RBP20.09■□□□□ 0.81
RGP1-201ENST00000378078 ST18O60284 1047 aa20.09■□□□□ 0.81
RGP1-201ENST00000378078 DCAF8L1A6NGE4 600 aa20.08■□□□□ 0.81
RGP1-201ENST00000378078 PAF1Q8N7H5 531 aa20.08■□□□□ 0.81
RGP1-201ENST00000378078 NUP155O75694 1391 aa20.07■□□□□ 0.8
RGP1-201ENST00000378078 CENPJQ9HC77 1338 aaPredicted RBP20.07■□□□□ 0.8
RGP1-201ENST00000378078 BECN2A8MW95 431 aa20.07■□□□□ 0.8
RGP1-201ENST00000378078 DHX37Q8IY37 1157 aaKnown RBP20.06■□□□□ 0.8
RGP1-201ENST00000378078 TTLL5Q6EMB2 1281 aa20.06■□□□□ 0.8
RGP1-201ENST00000378078 VSIG10Q8N0Z9 540 aa20.06■□□□□ 0.8
RGP1-201ENST00000378078 PSME1Q06323 249 aa20.06■□□□□ 0.8
RGP1-201ENST00000378078 CT47A1Q5JQC4 288 aaPredicted RBP20.05■□□□□ 0.8
RGP1-201ENST00000378078 ODF2Q5BJF6 829 aa20.05■□□□□ 0.8
RGP1-201ENST00000378078 MINK1Q8N4C8 1332 aaPredicted RBP20.05■□□□□ 0.8
RGP1-201ENST00000378078 WRNQ14191 1432 aaPredicted RBP eCLIP20.04■□□□□ 0.8
RGP1-201ENST00000378078 TEFQ10587 303 aa20.04■□□□□ 0.8
RGP1-201ENST00000378078 DIAPH3Q9NSV4 1193 aa20.04■□□□□ 0.8
RGP1-201ENST00000378078 TPM1P09493 284 aa20.03■□□□□ 0.8
RGP1-201ENST00000378078 CCAR1Q8IX12 1150 aaKnown RBP20.03■□□□□ 0.8
RGP1-201ENST00000378078 PHF14O94880 888 aa20.02■□□□□ 0.8
RGP1-201ENST00000378078 CHMP4CQ96CF2 233 aa20.01■□□□□ 0.79
RGP1-201ENST00000378078 COG3Q96JB2 828 aa20■□□□□ 0.79
RGP1-201ENST00000378078 HSP90AB2PQ58FF8 381 aa20■□□□□ 0.79
RGP1-201ENST00000378078 MPHOSPH9Q99550 1183 aa20■□□□□ 0.79
RGP1-201ENST00000378078 EIF3AQ14152 1382 aaKnown RBP20■□□□□ 0.79
RGP1-201ENST00000378078 NEUROD6Q96NK8 337 aa19.99■□□□□ 0.79
RGP1-201ENST00000378078 ERICH2A1L162 156 aa19.99■□□□□ 0.79
RGP1-201ENST00000378078 IFIT2P09913 472 aaKnown RBP19.99■□□□□ 0.79
RGP1-201ENST00000378078 CPLX1O14810 134 aa19.98■□□□□ 0.79
RGP1-201ENST00000378078 CCDC70Q6NSX1 233 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms