RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 DNMBPQ6XZF7 1577 aa11.09□□□□□ -0.63
PCDH9-202ENST00000377865 ESF1Q9H501 851 aaKnown RBP11.08□□□□□ -0.64
PCDH9-202ENST00000377865 AKNAQ7Z591 1439 aa11.08□□□□□ -0.64
PCDH9-202ENST00000377865 MSH5O43196 834 aa11.08□□□□□ -0.64
PCDH9-202ENST00000377865 UNC13AQ9UPW8 1703 aa11.07□□□□□ -0.64
PCDH9-202ENST00000377865 CFAP43Q8NDM7 1665 aa11.07□□□□□ -0.64
PCDH9-202ENST00000377865 KIAA1107Q9UPP5 1409 aa11.07□□□□□ -0.64
PCDH9-202ENST00000377865 ROCK1Q13464 1354 aa11.07□□□□□ -0.64
PCDH9-202ENST00000377865 WASHC2CQ9Y4E1 1318 aa11.07□□□□□ -0.64
PCDH9-202ENST00000377865 SPRYD3Q8NCJ5 442 aa11.07□□□□□ -0.64
PCDH9-202ENST00000377865 U2SURPO15042 1029 aaKnown RBP11.07□□□□□ -0.64
PCDH9-202ENST00000377865 CALD1Q05682 793 aaKnown RBP11.07□□□□□ -0.64
PCDH9-202ENST00000377865 PLIN1O60240 522 aa11.07□□□□□ -0.64
PCDH9-202ENST00000377865 HAP1P54257 671 aaPredicted RBP11.07□□□□□ -0.64
PCDH9-202ENST00000377865 BICRAQ9NZM4 1560 aa11.07□□□□□ -0.64
PCDH9-202ENST00000377865 MCCP23508 829 aa11.06□□□□□ -0.64
PCDH9-202ENST00000377865 SKOR2Q2VWA4 1001 aaPredicted RBP11.06□□□□□ -0.64
PCDH9-202ENST00000377865 NFKBIBQ15653 356 aa11.05□□□□□ -0.64
PCDH9-202ENST00000377865 ITPRIPQ8IWB1 547 aa11.05□□□□□ -0.64
PCDH9-202ENST00000377865 DAPK1P53355 1430 aa11.05□□□□□ -0.64
PCDH9-202ENST00000377865 ANKRD50Q9ULJ7 1429 aa11.05□□□□□ -0.64
PCDH9-202ENST00000377865 MFAP1P55081 439 aaKnown RBP11.05□□□□□ -0.64
PCDH9-202ENST00000377865 NCOA1Q15788 1441 aa11.05□□□□□ -0.64
PCDH9-202ENST00000377865 THOC2Q8NI27 1593 aaKnown RBP11.04□□□□□ -0.64
PCDH9-202ENST00000377865 HNRNPMP52272 730 aaKnown RBP eCLIP11.04□□□□□ -0.64
PCDH9-202ENST00000377865 CCDC146Q8IYE0 955 aa11.04□□□□□ -0.64
PCDH9-202ENST00000377865 ABCA10Q8WWZ4 1543 aa11.04□□□□□ -0.64
PCDH9-202ENST00000377865 BACH2Q9BYV9 841 aa11.04□□□□□ -0.64
PCDH9-202ENST00000377865 GZF1Q9H116 711 aaPredicted RBP11.04□□□□□ -0.64
PCDH9-202ENST00000377865 PLEKHH2Q8IVE3 1493 aa11.03□□□□□ -0.64
PCDH9-202ENST00000377865 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
PCDH9-202ENST00000377865 STAC3Q96MF2 364 aa11.03□□□□□ -0.64
PCDH9-202ENST00000377865 TOPBP1Q92547 1522 aa11.03□□□□□ -0.64
PCDH9-202ENST00000377865 CHAF1AQ13111 956 aaPredicted RBP11.02□□□□□ -0.64
PCDH9-202ENST00000377865 EFCAB2Q5VUJ9 269 aa11.02□□□□□ -0.64
PCDH9-202ENST00000377865 NINLQ9Y2I6 1382 aa11.02□□□□□ -0.64
PCDH9-202ENST00000377865 SLC4A3P48751 1232 aa11.02□□□□□ -0.65
PCDH9-202ENST00000377865 PNISRQ8TF01 805 aaKnown RBP11.02□□□□□ -0.65
PCDH9-202ENST00000377865 POGKQ9P215 609 aa11.02□□□□□ -0.65
PCDH9-202ENST00000377865 SMC4Q9NTJ3 1288 aa11.02□□□□□ -0.65
PCDH9-202ENST00000377865 SYAP1Q96A49 352 aaPredicted RBP11.01□□□□□ -0.65
PCDH9-202ENST00000377865 U2AF1L5P0DN76 240 aaPredicted RBP11.01□□□□□ -0.65
PCDH9-202ENST00000377865 U2AF1Q01081 240 aaKnown RBP eCLIP11.01□□□□□ -0.65
PCDH9-202ENST00000377865 NBPF8Q3BBV2 869 aa11□□□□□ -0.65
PCDH9-202ENST00000377865 POLA1P09884 1462 aaPredicted RBP11□□□□□ -0.65
PCDH9-202ENST00000377865 GOLGA6L6A8MZA4 724 aa11□□□□□ -0.65
PCDH9-202ENST00000377865 CHMP5Q9NZZ3 219 aa11□□□□□ -0.65
PCDH9-202ENST00000377865 HSP90AA2PQ14568 343 aaPredicted RBP10.99□□□□□ -0.65
PCDH9-202ENST00000377865 HDGFL2Q7Z4V5 671 aaPredicted RBP10.99□□□□□ -0.65
PCDH9-202ENST00000377865 FAM43AQ8N2R8 423 aa10.99□□□□□ -0.65
PCDH9-202ENST00000377865 ZKSCAN2Q63HK3 967 aa10.99□□□□□ -0.65
PCDH9-202ENST00000377865 GRIN2BQ13224 1484 aa10.98□□□□□ -0.65
PCDH9-202ENST00000377865 EPRSP07814 1512 aaKnown RBP10.98□□□□□ -0.65
PCDH9-202ENST00000377865 SCAPERQ9BY12 1400 aa10.98□□□□□ -0.65
PCDH9-202ENST00000377865 CCDC184Q52MB2 194 aa10.98□□□□□ -0.65
PCDH9-202ENST00000377865 ANKRD30BQ9BXX2 1392 aa10.97□□□□□ -0.65
PCDH9-202ENST00000377865 SRPK2P78362 688 aaKnown RBP10.97□□□□□ -0.65
PCDH9-202ENST00000377865 RPRD2Q5VT52 1461 aaKnown RBP10.97□□□□□ -0.65
PCDH9-202ENST00000377865 KIAA2012Q0VF49 1180 aa10.97□□□□□ -0.65
PCDH9-202ENST00000377865 CTTNBP2Q8WZ74 1663 aa10.96□□□□□ -0.65
PCDH9-202ENST00000377865 ZNF644Q9H582 1327 aaPredicted RBP10.96□□□□□ -0.66
PCDH9-202ENST00000377865 CLUAP1Q96AJ1 413 aa10.96□□□□□ -0.66
PCDH9-202ENST00000377865 ZRSR1Q15695 479 aaKnown RBP10.96□□□□□ -0.66
PCDH9-202ENST00000377865 JPH4Q96JJ6 628 aa10.95□□□□□ -0.66
PCDH9-202ENST00000377865 COG6Q9Y2V7 657 aa10.95□□□□□ -0.66
PCDH9-202ENST00000377865 DDX19BQ9UMR2 479 aa10.95□□□□□ -0.66
PCDH9-202ENST00000377865 TROQ12816 1431 aaPredicted RBP10.95□□□□□ -0.66
PCDH9-202ENST00000377865 SPAG9O60271 1321 aaKnown RBP10.95□□□□□ -0.66
PCDH9-202ENST00000377865 APAF1O14727 1248 aa10.95□□□□□ -0.66
PCDH9-202ENST00000377865 PHF14O94880 888 aa10.94□□□□□ -0.66
PCDH9-202ENST00000377865 IQGAP2Q13576 1575 aa10.94□□□□□ -0.66
PCDH9-202ENST00000377865 C9orf84Q5VXU9 1444 aa10.94□□□□□ -0.66
PCDH9-202ENST00000377865 LMOD3Q0VAK6 560 aa10.94□□□□□ -0.66
PCDH9-202ENST00000377865 ST18O60284 1047 aa10.93□□□□□ -0.66
PCDH9-202ENST00000377865 RUNDC1Q96C34 613 aa10.93□□□□□ -0.66
PCDH9-202ENST00000377865 TERF2IPQ9NYB0 399 aa10.93□□□□□ -0.66
PCDH9-202ENST00000377865 MRE11P49959 708 aa10.93□□□□□ -0.66
PCDH9-202ENST00000377865 PDE3AQ14432 1141 aa10.93□□□□□ -0.66
PCDH9-202ENST00000377865 NESP48681 1621 aa10.93□□□□□ -0.66
PCDH9-202ENST00000377865 ERBINQ96RT1 1412 aa10.93□□□□□ -0.66
PCDH9-202ENST00000377865 UGGT2Q9NYU1 1516 aa10.92□□□□□ -0.66
PCDH9-202ENST00000377865 NRDCO43847 1150 aa10.92□□□□□ -0.66
PCDH9-202ENST00000377865 PLCB2Q00722 1185 aa10.92□□□□□ -0.66
PCDH9-202ENST00000377865 CSPP1Q1MSJ5 1256 aa10.92□□□□□ -0.66
PCDH9-202ENST00000377865 CDCA7LQ96GN5 454 aa10.92□□□□□ -0.66
PCDH9-202ENST00000377865 IL27Q8NEV9 243 aa10.92□□□□□ -0.66
PCDH9-202ENST00000377865 ADAMTS8Q9UP79 889 aa10.92□□□□□ -0.66
PCDH9-202ENST00000377865 HMMRO75330 724 aa10.91□□□□□ -0.66
PCDH9-202ENST00000377865 PPP2R1AP30153 589 aa10.91□□□□□ -0.66
PCDH9-202ENST00000377865 DZIP1LQ8IYY4 767 aaKnown RBP10.91□□□□□ -0.66
PCDH9-202ENST00000377865 ISY1Q9ULR0 285 aaKnown RBP10.91□□□□□ -0.66
PCDH9-202ENST00000377865 CDK13Q14004 1512 aaKnown RBP10.91□□□□□ -0.66
PCDH9-202ENST00000377865 CAMSAP2Q08AD1 1489 aa10.9□□□□□ -0.66
PCDH9-202ENST00000377865 PTPRGP23470 1445 aa10.9□□□□□ -0.66
PCDH9-202ENST00000377865 BRPF3Q9ULD4 1205 aa10.9□□□□□ -0.66
PCDH9-202ENST00000377865 C22orf23Q9BZE7 217 aa10.9□□□□□ -0.66
PCDH9-202ENST00000377865 GOLGA6L4A6NEF3 574 aa10.9□□□□□ -0.66
PCDH9-202ENST00000377865 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.9□□□□□ -0.66
PCDH9-202ENST00000377865 TCOF1Q13428 1488 aaKnown RBP10.9□□□□□ -0.67
PCDH9-202ENST00000377865 ABCC5O15440 1437 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms