RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CHMP3Q9Y3E7 222 aa13.75□□□□□ -0.21
HIF3A-205ENST00000377670 PSME1Q06323 249 aa13.74□□□□□ -0.21
HIF3A-205ENST00000377670 CCER2I3L3R5 266 aa13.74□□□□□ -0.21
HIF3A-205ENST00000377670 FRAT2O75474 233 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-205ENST00000377670 TOP2BQ02880 1626 aa13.74□□□□□ -0.21
HIF3A-205ENST00000377670 GRIN2BQ13224 1484 aa13.73□□□□□ -0.21
HIF3A-205ENST00000377670 MS4A1P11836 297 aa13.73□□□□□ -0.21
HIF3A-205ENST00000377670 GORABQ5T7V8 394 aa13.73□□□□□ -0.21
HIF3A-205ENST00000377670 CCDC146Q8IYE0 955 aa13.73□□□□□ -0.21
HIF3A-205ENST00000377670 AFAP1Q8N556 730 aa13.73□□□□□ -0.21
HIF3A-205ENST00000377670 KTN1Q86UP2 1357 aaKnown RBP13.73□□□□□ -0.21
HIF3A-205ENST00000377670 PIP4K2BP78356 416 aa13.73□□□□□ -0.21
HIF3A-205ENST00000377670 HMGXB3Q12766 1538 aa13.72□□□□□ -0.21
HIF3A-205ENST00000377670 PRXQ9BXM0 1461 aa13.72□□□□□ -0.21
HIF3A-205ENST00000377670 EIF3AQ14152 1382 aaKnown RBP13.72□□□□□ -0.21
HIF3A-205ENST00000377670 PLCB2Q00722 1185 aa13.72□□□□□ -0.21
HIF3A-205ENST00000377670 MYOM3Q5VTT5 1437 aa13.72□□□□□ -0.21
HIF3A-205ENST00000377670 AMER1Q5JTC6 1135 aaPredicted RBP13.71□□□□□ -0.21
HIF3A-205ENST00000377670 NCOA2Q15596 1464 aa13.71□□□□□ -0.21
HIF3A-205ENST00000377670 CCDC144AA2RUR9 1427 aa13.71□□□□□ -0.21
HIF3A-205ENST00000377670 U2AF1L5P0DN76 240 aaPredicted RBP13.71□□□□□ -0.22
HIF3A-205ENST00000377670 U2AF1Q01081 240 aaKnown RBP eCLIP13.71□□□□□ -0.22
HIF3A-205ENST00000377670 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.7□□□□□ -0.22
HIF3A-205ENST00000377670 CALD1Q05682 793 aaKnown RBP13.7□□□□□ -0.22
HIF3A-205ENST00000377670 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
HIF3A-205ENST00000377670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.69□□□□□ -0.22
HIF3A-205ENST00000377670 PPP1R1BQ9UD71 204 aaPredicted RBP13.69□□□□□ -0.22
HIF3A-205ENST00000377670 CASKIN1Q8WXD9 1431 aa13.69□□□□□ -0.22
HIF3A-205ENST00000377670 PRG4Q92954 1404 aaPredicted RBP13.69□□□□□ -0.22
HIF3A-205ENST00000377670 C1orf141Q5JVX7 400 aa13.68□□□□□ -0.22
HIF3A-205ENST00000377670 VGFO15240 615 aaPredicted RBP13.68□□□□□ -0.22
HIF3A-205ENST00000377670 PANK3Q9H999 370 aa13.68□□□□□ -0.22
HIF3A-205ENST00000377670 HSP90AB1P08238 724 aaKnown RBP13.68□□□□□ -0.22
HIF3A-205ENST00000377670 L1TD1Q5T7N2 865 aaKnown RBP13.68□□□□□ -0.22
HIF3A-205ENST00000377670 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
HIF3A-205ENST00000377670 NUTM2BA6NNL0 878 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-205ENST00000377670 NUTM2EB1AL46 878 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-205ENST00000377670 NUTM2AQ8IVF1 878 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-205ENST00000377670 STK31Q9BXU1 1019 aa13.67□□□□□ -0.22
HIF3A-205ENST00000377670 KIF15Q9NS87 1388 aa13.67□□□□□ -0.22
HIF3A-205ENST00000377670 TSHZ2Q9NRE2 1034 aa13.67□□□□□ -0.22
HIF3A-205ENST00000377670 ERICH3Q5RHP9 1530 aa13.66□□□□□ -0.22
HIF3A-205ENST00000377670 PROSER2Q86WR7 435 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-205ENST00000377670 CWC22Q9HCG8 908 aaKnown RBP13.66□□□□□ -0.22
HIF3A-205ENST00000377670 MSNP26038 577 aaKnown RBP13.65□□□□□ -0.22
HIF3A-205ENST00000377670 SPRYD3Q8NCJ5 442 aa13.65□□□□□ -0.22
HIF3A-205ENST00000377670 RRP7AQ9Y3A4 280 aaKnown RBP13.64□□□□□ -0.23
HIF3A-205ENST00000377670 USP47Q96K76 1375 aa13.64□□□□□ -0.23
HIF3A-205ENST00000377670 HDAC5Q9UQL6 1122 aa13.64□□□□□ -0.23
HIF3A-205ENST00000377670 TTC5Q8N0Z6 440 aa13.63□□□□□ -0.23
HIF3A-205ENST00000377670 MINK1Q8N4C8 1332 aaPredicted RBP13.62□□□□□ -0.23
HIF3A-205ENST00000377670 RALBP1Q15311 655 aa13.62□□□□□ -0.23
HIF3A-205ENST00000377670 WASHC2AQ641Q2 1341 aa13.61□□□□□ -0.23
HIF3A-205ENST00000377670 TRIM34Q9BYJ4 488 aa13.61□□□□□ -0.23
HIF3A-205ENST00000377670 ARID3AQ99856 593 aa13.61□□□□□ -0.23
HIF3A-205ENST00000377670 APBB1O00213 710 aa13.6□□□□□ -0.23
HIF3A-205ENST00000377670 COG3Q96JB2 828 aa13.6□□□□□ -0.23
HIF3A-205ENST00000377670 CTDP1Q9Y5B0 961 aaPredicted RBP13.6□□□□□ -0.23
HIF3A-205ENST00000377670 ANKRD50Q9ULJ7 1429 aa13.6□□□□□ -0.23
HIF3A-205ENST00000377670 IFT140Q96RY7 1462 aa13.6□□□□□ -0.23
HIF3A-205ENST00000377670 KRI1Q8N9T8 703 aaKnown RBP13.6□□□□□ -0.23
HIF3A-205ENST00000377670 FBXW7Q969H0 707 aa13.6□□□□□ -0.23
HIF3A-205ENST00000377670 DNMBPQ6XZF7 1577 aa13.6□□□□□ -0.23
HIF3A-205ENST00000377670 TMEM132EQ6IEE7 984 aa13.6□□□□□ -0.23
HIF3A-205ENST00000377670 HSCBQ8IWL3 235 aa13.6□□□□□ -0.23
HIF3A-205ENST00000377670 PRKRIP1Q9H875 184 aaPredicted RBP13.6□□□□□ -0.23
HIF3A-205ENST00000377670 RCAN3Q9UKA8 241 aa13.6□□□□□ -0.23
HIF3A-205ENST00000377670 GNL2Q13823 731 aaKnown RBP13.59□□□□□ -0.23
HIF3A-205ENST00000377670 CDK13Q14004 1512 aaKnown RBP13.59□□□□□ -0.23
HIF3A-205ENST00000377670 FYCO1Q9BQS8 1478 aa13.59□□□□□ -0.23
HIF3A-205ENST00000377670 CHAF1AQ13111 956 aaPredicted RBP13.59□□□□□ -0.23
HIF3A-205ENST00000377670 CLUAP1Q96AJ1 413 aa13.59□□□□□ -0.23
HIF3A-205ENST00000377670 UACAQ9BZF9 1416 aa13.58□□□□□ -0.23
HIF3A-205ENST00000377670 NLRP13Q86W25 1043 aa13.58□□□□□ -0.24
HIF3A-205ENST00000377670 ARHGAP5Q13017 1502 aa13.57□□□□□ -0.24
HIF3A-205ENST00000377670 POGZQ7Z3K3 1410 aa13.57□□□□□ -0.24
HIF3A-205ENST00000377670 TEFQ10587 303 aa13.56□□□□□ -0.24
HIF3A-205ENST00000377670 NOL10Q9BSC4 688 aaKnown RBP13.56□□□□□ -0.24
HIF3A-205ENST00000377670 THEMISQ8N1K5 641 aaPredicted RBP13.56□□□□□ -0.24
HIF3A-205ENST00000377670 IPO8O15397 1037 aaKnown RBP13.56□□□□□ -0.24
HIF3A-205ENST00000377670 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
HIF3A-205ENST00000377670 GOLGA6L6A8MZA4 724 aa13.56□□□□□ -0.24
HIF3A-205ENST00000377670 LMOD3Q0VAK6 560 aa13.56□□□□□ -0.24
HIF3A-205ENST00000377670 TXNDC2Q86VQ3 553 aa13.55□□□□□ -0.24
HIF3A-205ENST00000377670 GZF1Q9H116 711 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-205ENST00000377670 PLIN1O60240 522 aa13.55□□□□□ -0.24
HIF3A-205ENST00000377670 USP35Q9P2H5 1018 aa13.55□□□□□ -0.24
HIF3A-205ENST00000377670 NBPF1Q3BBV0 1214 aa13.54□□□□□ -0.24
HIF3A-205ENST00000377670 KIF7Q2M1P5 1343 aa13.54□□□□□ -0.24
HIF3A-205ENST00000377670 RAPGEF3O95398 923 aa13.54□□□□□ -0.24
HIF3A-205ENST00000377670 BCL2L13Q9BXK5 485 aa13.54□□□□□ -0.24
HIF3A-205ENST00000377670 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
HIF3A-205ENST00000377670 RAPGEF4Q8WZA2 1011 aa13.54□□□□□ -0.24
HIF3A-205ENST00000377670 MCCP23508 829 aa13.53□□□□□ -0.24
HIF3A-205ENST00000377670 VPS53Q5VIR6 699 aa13.53□□□□□ -0.24
HIF3A-205ENST00000377670 SYNJ2O15056 1496 aa13.53□□□□□ -0.24
HIF3A-205ENST00000377670 URB2Q14146 1524 aaKnown RBP13.53□□□□□ -0.24
HIF3A-205ENST00000377670 NLRP2Q9NX02 1062 aa13.53□□□□□ -0.24
HIF3A-205ENST00000377670 ELL2O00472 640 aaPredicted RBP13.53□□□□□ -0.24
HIF3A-205ENST00000377670 KIAA1211Q6ZU35 1233 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms