RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 MYBBP1AQ9BQG0 1328 aaKnown RBP22.31■■□□□ 1.16
CNTNAP3-204ENST00000377656 MSNP26038 577 aaKnown RBP22.31■■□□□ 1.16
CNTNAP3-204ENST00000377656 VGFO15240 615 aaPredicted RBP22.3■■□□□ 1.16
CNTNAP3-204ENST00000377656 PTMSP20962 102 aa22.29■■□□□ 1.16
CNTNAP3-204ENST00000377656 DRC7Q8IY82 874 aa22.29■■□□□ 1.16
CNTNAP3-204ENST00000377656 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
CNTNAP3-204ENST00000377656 GPATCH3Q96I76 525 aa22.29■■□□□ 1.16
CNTNAP3-204ENST00000377656 MFAP1P55081 439 aaKnown RBP22.29■■□□□ 1.16
CNTNAP3-204ENST00000377656 LTV1Q96GA3 475 aaPredicted RBP22.28■■□□□ 1.16
CNTNAP3-204ENST00000377656 CHMP3Q9Y3E7 222 aa22.28■■□□□ 1.16
CNTNAP3-204ENST00000377656 UACAQ9BZF9 1416 aa22.28■■□□□ 1.16
CNTNAP3-204ENST00000377656 TRIM6-TRIM34B2RNG4 842 aa22.27■■□□□ 1.16
CNTNAP3-204ENST00000377656 TAF7LQ5H9L4 462 aa22.27■■□□□ 1.15
CNTNAP3-204ENST00000377656 DEKP35659 375 aaKnown RBP22.26■■□□□ 1.15
CNTNAP3-204ENST00000377656 HTATSF1O43719 755 aaKnown RBP22.26■■□□□ 1.15
CNTNAP3-204ENST00000377656 CCDC9Q9Y3X0 531 aaKnown RBP22.25■■□□□ 1.15
CNTNAP3-204ENST00000377656 KIF21BO75037 1637 aa22.25■■□□□ 1.15
CNTNAP3-204ENST00000377656 RRP7AQ9Y3A4 280 aaKnown RBP22.24■■□□□ 1.15
CNTNAP3-204ENST00000377656 PRKRIP1Q9H875 184 aaPredicted RBP22.23■■□□□ 1.15
CNTNAP3-204ENST00000377656 CGNL1Q0VF96 1302 aa22.22■■□□□ 1.15
CNTNAP3-204ENST00000377656 EVC2Q86UK5 1308 aa22.22■■□□□ 1.15
CNTNAP3-204ENST00000377656 GZF1Q9H116 711 aaPredicted RBP22.2■■□□□ 1.14
CNTNAP3-204ENST00000377656 SYAP1Q96A49 352 aaPredicted RBP22.19■■□□□ 1.14
CNTNAP3-204ENST00000377656 COG3Q96JB2 828 aa22.19■■□□□ 1.14
CNTNAP3-204ENST00000377656 USP47Q96K76 1375 aa22.19■■□□□ 1.14
CNTNAP3-204ENST00000377656 TMX4Q9H1E5 349 aaPredicted RBP22.19■■□□□ 1.14
CNTNAP3-204ENST00000377656 IGF1RP08069 1367 aa22.19■■□□□ 1.14
CNTNAP3-204ENST00000377656 IPO9Q96P70 1041 aaKnown RBP22.17■■□□□ 1.14
CNTNAP3-204ENST00000377656 ELL2O00472 640 aaPredicted RBP22.16■■□□□ 1.14
CNTNAP3-204ENST00000377656 CLSTN1O94985 981 aa22.16■■□□□ 1.14
CNTNAP3-204ENST00000377656 E9PSI1 815 aa22.15■■□□□ 1.14
CNTNAP3-204ENST00000377656 CYB5RLQ6IPT4 315 aa22.15■■□□□ 1.14
CNTNAP3-204ENST00000377656 KIAA2012Q0VF49 1180 aa22.14■■□□□ 1.13
CNTNAP3-204ENST00000377656 MINK1Q8N4C8 1332 aaPredicted RBP22.13■■□□□ 1.13
CNTNAP3-204ENST00000377656 BCL2L13Q9BXK5 485 aa22.13■■□□□ 1.13
CNTNAP3-204ENST00000377656 HSP90B1P14625 803 aaKnown RBP22.12■■□□□ 1.13
CNTNAP3-204ENST00000377656 ZBED9Q6R2W3 1325 aa22.12■■□□□ 1.13
CNTNAP3-204ENST00000377656 ZKSCAN2Q63HK3 967 aa22.12■■□□□ 1.13
CNTNAP3-204ENST00000377656 CCDC34Q96HJ3 373 aa22.12■■□□□ 1.13
CNTNAP3-204ENST00000377656 MYOM3Q5VTT5 1437 aa22.11■■□□□ 1.13
CNTNAP3-204ENST00000377656 CENPQQ7L2Z9 268 aaPredicted RBP22.1■■□□□ 1.13
CNTNAP3-204ENST00000377656 OSCARQ8IYS5 282 aa22.1■■□□□ 1.13
CNTNAP3-204ENST00000377656 GTF2E1P29083 439 aaPredicted RBP22.1■■□□□ 1.13
CNTNAP3-204ENST00000377656 ST18O60284 1047 aa22.1■■□□□ 1.13
CNTNAP3-204ENST00000377656 GAPVD1Q14C86 1478 aa22.1■■□□□ 1.13
CNTNAP3-204ENST00000377656 APAF1O14727 1248 aa22.09■■□□□ 1.13
CNTNAP3-204ENST00000377656 TEFQ10587 303 aa22.08■■□□□ 1.13
CNTNAP3-204ENST00000377656 NOL8Q76FK4 1167 aaKnown RBP22.08■■□□□ 1.12
CNTNAP3-204ENST00000377656 C1orf141Q5JVX7 400 aa22.08■■□□□ 1.12
CNTNAP3-204ENST00000377656 ERICH3Q5RHP9 1530 aa22.07■■□□□ 1.12
CNTNAP3-204ENST00000377656 FGD6Q6ZV73 1430 aa22.07■■□□□ 1.12
CNTNAP3-204ENST00000377656 CSPP1Q1MSJ5 1256 aa22.07■■□□□ 1.12
CNTNAP3-204ENST00000377656 FGD5Q6ZNL6 1462 aa22.07■■□□□ 1.12
CNTNAP3-204ENST00000377656 LRRC9Q6ZRR7 1453 aa22.07■■□□□ 1.12
CNTNAP3-204ENST00000377656 PLIN1O60240 522 aa22.06■■□□□ 1.12
CNTNAP3-204ENST00000377656 NGEFQ8N5V2 710 aa22.06■■□□□ 1.12
CNTNAP3-204ENST00000377656 RRBP1Q9P2E9 1410 aaKnown RBP22.06■■□□□ 1.12
CNTNAP3-204ENST00000377656 FRAT2O75474 233 aaPredicted RBP22.05■■□□□ 1.12
CNTNAP3-204ENST00000377656 RRP1P56182 461 aaKnown RBP22.05■■□□□ 1.12
CNTNAP3-204ENST00000377656 ANKRD45Q5TZF3 282 aa22.05■■□□□ 1.12
CNTNAP3-204ENST00000377656 KIF3AQ9Y496 699 aa22.05■■□□□ 1.12
CNTNAP3-204ENST00000377656 FOXD4L1Q9NU39 408 aa22.05■■□□□ 1.12
CNTNAP3-204ENST00000377656 GOLGA6L3A6NEY3 463 aa22.04■■□□□ 1.12
CNTNAP3-204ENST00000377656 KIF16BQ96L93 1317 aa22.04■■□□□ 1.12
CNTNAP3-204ENST00000377656 TPM4P67936 248 aa22.04■■□□□ 1.12
CNTNAP3-204ENST00000377656 DIAPH1O60610 1272 aaKnown RBP22.04■■□□□ 1.12
CNTNAP3-204ENST00000377656 STAC3Q96MF2 364 aa22.04■■□□□ 1.12
CNTNAP3-204ENST00000377656 TOMM22Q9NS69 142 aa22.04■■□□□ 1.12
CNTNAP3-204ENST00000377656 COG6Q9Y2V7 657 aa22.03■■□□□ 1.12
CNTNAP3-204ENST00000377656 EXOC6Q8TAG9 804 aa22.02■■□□□ 1.12
CNTNAP3-204ENST00000377656 G3V3G9 751 aa22.01■■□□□ 1.11
CNTNAP3-204ENST00000377656 FAM161AQ3B820 660 aa22.01■■□□□ 1.11
CNTNAP3-204ENST00000377656 DCAF8Q5TAQ9 597 aa22.01■■□□□ 1.11
CNTNAP3-204ENST00000377656 ZNF644Q9H582 1327 aaPredicted RBP22.01■■□□□ 1.11
CNTNAP3-204ENST00000377656 RILPL2Q969X0 211 aa22■■□□□ 1.11
CNTNAP3-204ENST00000377656 CRBNQ96SW2 442 aa21.99■■□□□ 1.11
CNTNAP3-204ENST00000377656 PDE4AP27815 886 aa21.99■■□□□ 1.11
CNTNAP3-204ENST00000377656 ARAP1Q96P48 1450 aa21.99■■□□□ 1.11
CNTNAP3-204ENST00000377656 CUX1P39880 1505 aa21.99■■□□□ 1.11
CNTNAP3-204ENST00000377656 RAD54L2Q9Y4B4 1467 aa21.99■■□□□ 1.11
CNTNAP3-204ENST00000377656 NEXNQ0ZGT2 675 aa21.98■■□□□ 1.11
CNTNAP3-204ENST00000377656 FANCIQ9NVI1 1328 aa21.98■■□□□ 1.11
CNTNAP3-204ENST00000377656 RASSF8Q8NHQ8 419 aa21.98■■□□□ 1.11
CNTNAP3-204ENST00000377656 SYNJ1O43426 1573 aa21.98■■□□□ 1.11
CNTNAP3-204ENST00000377656 NCAPD3P42695 1498 aa21.97■■□□□ 1.11
CNTNAP3-204ENST00000377656 EVA1CP58658 441 aa21.97■■□□□ 1.11
CNTNAP3-204ENST00000377656 DDX19BQ9UMR2 479 aa21.97■■□□□ 1.11
CNTNAP3-204ENST00000377656 RIPK4P57078 832 aa21.96■■□□□ 1.11
CNTNAP3-204ENST00000377656 TTC5Q8N0Z6 440 aa21.96■■□□□ 1.11
CNTNAP3-204ENST00000377656 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.95■■□□□ 1.1
CNTNAP3-204ENST00000377656 SF3A1Q15459 793 aaKnown RBP21.95■■□□□ 1.1
CNTNAP3-204ENST00000377656 API5Q9BZZ5 524 aaKnown RBP21.95■■□□□ 1.1
CNTNAP3-204ENST00000377656 EIF2S2P20042 333 aaKnown RBP21.95■■□□□ 1.1
CNTNAP3-204ENST00000377656 CASKIN1Q8WXD9 1431 aa21.94■■□□□ 1.1
CNTNAP3-204ENST00000377656 C9orf78Q9NZ63 289 aaPredicted RBP21.94■■□□□ 1.1
CNTNAP3-204ENST00000377656 PHF14O94880 888 aa21.93■■□□□ 1.1
CNTNAP3-204ENST00000377656 CCDC7Q96M83 1385 aa21.93■■□□□ 1.1
CNTNAP3-204ENST00000377656 CHMP4CQ96CF2 233 aa21.93■■□□□ 1.1
CNTNAP3-204ENST00000377656 PSME1Q06323 249 aa21.92■■□□□ 1.1
CNTNAP3-204ENST00000377656 DZIP1LQ8IYY4 767 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms