RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 PLA2R1Q13018 1463 aa16.05■□□□□ 0.16
TNFRSF9-201ENST00000377507 PRAG1Q86YV5 1406 aa16.04■□□□□ 0.16
TNFRSF9-201ENST00000377507 KTN1Q86UP2 1357 aaKnown RBP16.04■□□□□ 0.16
TNFRSF9-201ENST00000377507 RBM19Q9Y4C8 960 aaKnown RBP16.04■□□□□ 0.16
TNFRSF9-201ENST00000377507 CCDC144AA2RUR9 1427 aa16.04■□□□□ 0.16
TNFRSF9-201ENST00000377507 ST20-MTHFSA0A0A6YYL1 179 aa16.04■□□□□ 0.16
TNFRSF9-201ENST00000377507 MYO5CQ9NQX4 1742 aa16.03■□□□□ 0.16
TNFRSF9-201ENST00000377507 IQGAP3Q86VI3 1631 aa16.03■□□□□ 0.16
TNFRSF9-201ENST00000377507 ATP10AO60312 1499 aa16.03■□□□□ 0.16
TNFRSF9-201ENST00000377507 ERCC6L2Q5T890 1561 aa16.03■□□□□ 0.16
TNFRSF9-201ENST00000377507 MAGI2Q86UL8 1455 aa16.03■□□□□ 0.16
TNFRSF9-201ENST00000377507 GPRASP1Q5JY77 1395 aa16.02■□□□□ 0.16
TNFRSF9-201ENST00000377507 PPP4R2Q9NY27 417 aa16.02■□□□□ 0.16
TNFRSF9-201ENST00000377507 KDM2AQ9Y2K7 1162 aa16.02■□□□□ 0.16
TNFRSF9-201ENST00000377507 TRPM1Q7Z4N2 1603 aa16.02■□□□□ 0.16
TNFRSF9-201ENST00000377507 SMG6Q86US8 1419 aaKnown RBP16.02■□□□□ 0.15
TNFRSF9-201ENST00000377507 PNISRQ8TF01 805 aaKnown RBP16.02■□□□□ 0.15
TNFRSF9-201ENST00000377507 E9PCH4 1651 aa16.01■□□□□ 0.15
TNFRSF9-201ENST00000377507 DUOX2Q9NRD8 1548 aa16.01■□□□□ 0.15
TNFRSF9-201ENST00000377507 UHRF1BP1LA0JNW5 1464 aa16.01■□□□□ 0.15
TNFRSF9-201ENST00000377507 PLCH2O75038 1416 aa16.01■□□□□ 0.15
TNFRSF9-201ENST00000377507 IRX6P78412 446 aaPredicted RBP16■□□□□ 0.15
TNFRSF9-201ENST00000377507 ERBINQ96RT1 1412 aa15.99■□□□□ 0.15
TNFRSF9-201ENST00000377507 LAMC1P11047 1609 aa15.99■□□□□ 0.15
TNFRSF9-201ENST00000377507 RALBP1Q15311 655 aa15.98■□□□□ 0.15
TNFRSF9-201ENST00000377507 POLR3GLQ9BT43 218 aa15.98■□□□□ 0.15
TNFRSF9-201ENST00000377507 A2MP01023 1474 aa15.98■□□□□ 0.15
TNFRSF9-201ENST00000377507 LRPPRCP42704 1394 aaKnown RBP15.97■□□□□ 0.15
TNFRSF9-201ENST00000377507 RNF123Q5XPI4 1314 aa15.97■□□□□ 0.15
TNFRSF9-201ENST00000377507 CLASP1Q7Z460 1538 aa15.97■□□□□ 0.15
TNFRSF9-201ENST00000377507 BRD4O60885 1362 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF9-201ENST00000377507 NUDCQ9Y266 331 aa15.95■□□□□ 0.14
TNFRSF9-201ENST00000377507 ZCCHC11Q5TAX3 1644 aaKnown RBP15.95■□□□□ 0.14
TNFRSF9-201ENST00000377507 MYBBP1AQ9BQG0 1328 aaKnown RBP15.95■□□□□ 0.14
TNFRSF9-201ENST00000377507 PRDM15P57071 1507 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF9-201ENST00000377507 EFCAB2Q5VUJ9 269 aa15.94■□□□□ 0.14
TNFRSF9-201ENST00000377507 ANP32EQ9BTT0 268 aa15.94■□□□□ 0.14
TNFRSF9-201ENST00000377507 ABCC1P33527 1531 aa15.94■□□□□ 0.14
TNFRSF9-201ENST00000377507 TMC1Q8TDI8 760 aa15.94■□□□□ 0.14
TNFRSF9-201ENST00000377507 ARAP3Q8WWN8 1544 aa15.93■□□□□ 0.14
TNFRSF9-201ENST00000377507 EIF2AK4Q9P2K8 1649 aaKnown RBP15.92■□□□□ 0.14
TNFRSF9-201ENST00000377507 NBPF1Q3BBV0 1214 aa15.92■□□□□ 0.14
TNFRSF9-201ENST00000377507 PER1O15534 1290 aaPredicted RBP15.92■□□□□ 0.14
TNFRSF9-201ENST00000377507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.92■□□□□ 0.14
TNFRSF9-201ENST00000377507 PARD3Q8TEW0 1356 aa15.91■□□□□ 0.14
TNFRSF9-201ENST00000377507 TESK2Q96S53 571 aa15.91■□□□□ 0.14
TNFRSF9-201ENST00000377507 WASHC2CQ9Y4E1 1318 aa15.91■□□□□ 0.14
TNFRSF9-201ENST00000377507 RTEL1-TNFRSF6BF6WH68 1400 aa15.91■□□□□ 0.14
TNFRSF9-201ENST00000377507 COL17A1Q9UMD9 1497 aaPredicted RBP15.9■□□□□ 0.14
TNFRSF9-201ENST00000377507 RGL3Q3MIN7 710 aa15.9■□□□□ 0.14
TNFRSF9-201ENST00000377507 TRAPPC8Q9Y2L5 1435 aa15.89■□□□□ 0.13
TNFRSF9-201ENST00000377507 FANCIQ9NVI1 1328 aa15.88■□□□□ 0.13
TNFRSF9-201ENST00000377507 NLRP13Q86W25 1043 aa15.87■□□□□ 0.13
TNFRSF9-201ENST00000377507 CNGB1Q14028 1251 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF9-201ENST00000377507 RNF17Q9BXT8 1623 aaKnown RBP15.86■□□□□ 0.13
TNFRSF9-201ENST00000377507 INSRP06213 1382 aa15.85■□□□□ 0.13
TNFRSF9-201ENST00000377507 B4GALNT3Q6L9W6 998 aa15.85■□□□□ 0.13
TNFRSF9-201ENST00000377507 DISP3Q9P2K9 1392 aa15.85■□□□□ 0.13
TNFRSF9-201ENST00000377507 STAC3Q96MF2 364 aa15.84■□□□□ 0.13
TNFRSF9-201ENST00000377507 PTPRTO14522 1441 aa15.84■□□□□ 0.13
TNFRSF9-201ENST00000377507 ZFYVE16Q7Z3T8 1539 aa15.84■□□□□ 0.13
TNFRSF9-201ENST00000377507 ZMYM4Q5VZL5 1548 aa15.83■□□□□ 0.12
TNFRSF9-201ENST00000377507 TRPM2O94759 1503 aa15.83■□□□□ 0.12
TNFRSF9-201ENST00000377507 SPAG9O60271 1321 aaKnown RBP15.83■□□□□ 0.12
TNFRSF9-201ENST00000377507 DEPDC5O75140 1603 aa15.82■□□□□ 0.12
TNFRSF9-201ENST00000377507 TMF1P82094 1093 aa15.81■□□□□ 0.12
TNFRSF9-201ENST00000377507 MADDQ8WXG6 1647 aa15.8■□□□□ 0.12
TNFRSF9-201ENST00000377507 AFAP1Q8N556 730 aa15.8■□□□□ 0.12
TNFRSF9-201ENST00000377507 VWDEQ8N2E2 1590 aa15.79■□□□□ 0.12
TNFRSF9-201ENST00000377507 PDE3BQ13370 1112 aa15.79■□□□□ 0.12
TNFRSF9-201ENST00000377507 WDR7Q9Y4E6 1490 aa15.78■□□□□ 0.12
TNFRSF9-201ENST00000377507 MSH5O43196 834 aa15.78■□□□□ 0.12
TNFRSF9-201ENST00000377507 PANK3Q9H999 370 aa15.78■□□□□ 0.12
TNFRSF9-201ENST00000377507 ABCA9Q8IUA7 1624 aa15.78■□□□□ 0.12
TNFRSF9-201ENST00000377507 SCAPERQ9BY12 1400 aa15.78■□□□□ 0.12
TNFRSF9-201ENST00000377507 NEURL4Q96JN8 1562 aa15.78■□□□□ 0.12
TNFRSF9-201ENST00000377507 CEP152O94986 1710 aa15.77■□□□□ 0.12
TNFRSF9-201ENST00000377507 IQGAP1P46940 1657 aa15.77■□□□□ 0.12
TNFRSF9-201ENST00000377507 INO80Q9ULG1 1556 aaPredicted RBP15.77■□□□□ 0.11
TNFRSF9-201ENST00000377507 TET3O43151 1660 aa15.77■□□□□ 0.11
TNFRSF9-201ENST00000377507 SPHKAPQ2M3C7 1700 aa15.76■□□□□ 0.11
TNFRSF9-201ENST00000377507 BLMP54132 1417 aaPredicted RBP15.75■□□□□ 0.11
TNFRSF9-201ENST00000377507 ATP7AQ04656 1500 aa15.75■□□□□ 0.11
TNFRSF9-201ENST00000377507 FANCAO15360 1455 aa15.74■□□□□ 0.11
TNFRSF9-201ENST00000377507 CLTCL1P53675 1640 aa15.74■□□□□ 0.11
TNFRSF9-201ENST00000377507 SCAF11Q99590 1463 aaKnown RBP15.73■□□□□ 0.11
TNFRSF9-201ENST00000377507 CC2D1BQ5T0F9 858 aaKnown RBP15.72■□□□□ 0.11
TNFRSF9-201ENST00000377507 CCDC136Q96JN2 1154 aa15.72■□□□□ 0.11
TNFRSF9-201ENST00000377507 KIAA1210Q9ULL0 1709 aa15.71■□□□□ 0.11
TNFRSF9-201ENST00000377507 RRP1P56182 461 aaKnown RBP15.71■□□□□ 0.11
TNFRSF9-201ENST00000377507 KANK1Q14678 1352 aa15.71■□□□□ 0.11
TNFRSF9-201ENST00000377507 SENP3-EIF4A1A0A087X0R7 540 aa15.7■□□□□ 0.1
TNFRSF9-201ENST00000377507 CDCA8Q53HL2 280 aa15.7■□□□□ 0.1
TNFRSF9-201ENST00000377507 RCAN3Q9UKA8 241 aa15.7■□□□□ 0.1
TNFRSF9-201ENST00000377507 MROH1Q8NDA8 1641 aa15.69■□□□□ 0.1
TNFRSF9-201ENST00000377507 SYNMO15061 1565 aa15.69■□□□□ 0.1
TNFRSF9-201ENST00000377507 ADGRL1O94910 1474 aa15.69■□□□□ 0.1
TNFRSF9-201ENST00000377507 NPC1L1Q9UHC9 1359 aa15.67■□□□□ 0.1
TNFRSF9-201ENST00000377507 AMER1Q5JTC6 1135 aaPredicted RBP15.67■□□□□ 0.1
TNFRSF9-201ENST00000377507 MYOM2P54296 1465 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms