RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 KIAA1107Q9UPP5 1409 aa28.91■■■□□ 2.22
SYNDIG1-201ENST00000376862 RALGAPBQ86X10 1494 aa28.91■■■□□ 2.22
SYNDIG1-201ENST00000376862 ST20-MTHFSA0A0A6YYL1 179 aa28.89■■■□□ 2.22
SYNDIG1-201ENST00000376862 NLRP13Q86W25 1043 aa28.89■■■□□ 2.22
SYNDIG1-201ENST00000376862 DCAF11Q8TEB1 546 aa28.88■■■□□ 2.21
SYNDIG1-201ENST00000376862 FAM43AQ8N2R8 423 aa28.87■■■□□ 2.21
SYNDIG1-201ENST00000376862 EIF4G3O43432 1585 aaKnown RBP28.87■■■□□ 2.21
SYNDIG1-201ENST00000376862 C20orf194Q5TEA3 1177 aa28.87■■■□□ 2.21
SYNDIG1-201ENST00000376862 RSPH6AQ9H0K4 717 aa28.86■■■□□ 2.21
SYNDIG1-201ENST00000376862 KDM2BQ8NHM5 1336 aa28.86■■■□□ 2.21
SYNDIG1-201ENST00000376862 UHRF1BP1Q6BDS2 1440 aa28.86■■■□□ 2.21
SYNDIG1-201ENST00000376862 PKD2Q13563 968 aa28.85■■■□□ 2.21
SYNDIG1-201ENST00000376862 C8orf34Q49A92 452 aa28.83■■■□□ 2.21
SYNDIG1-201ENST00000376862 PARD3Q8TEW0 1356 aa28.82■■■□□ 2.2
SYNDIG1-201ENST00000376862 FAM161AQ3B820 660 aa28.82■■■□□ 2.2
SYNDIG1-201ENST00000376862 KIAA0586Q9BVV6 1533 aa28.79■■■□□ 2.2
SYNDIG1-201ENST00000376862 GRIN2AQ12879 1464 aa28.79■■■□□ 2.2
SYNDIG1-201ENST00000376862 CENPQQ7L2Z9 268 aaPredicted RBP28.77■■■□□ 2.2
SYNDIG1-201ENST00000376862 KDM2AQ9Y2K7 1162 aa28.76■■■□□ 2.19
SYNDIG1-201ENST00000376862 FBLN2P98095 1184 aa28.75■■■□□ 2.19
SYNDIG1-201ENST00000376862 DISP1Q96F81 1524 aa28.75■■■□□ 2.19
SYNDIG1-201ENST00000376862 BLMP54132 1417 aaPredicted RBP28.74■■■□□ 2.19
SYNDIG1-201ENST00000376862 KIAA0556O60303 1618 aa28.73■■■□□ 2.19
SYNDIG1-201ENST00000376862 CHMP7Q8WUX9 453 aaPredicted RBP28.73■■■□□ 2.19
SYNDIG1-201ENST00000376862 ADGBQ8N7X0 1667 aa28.72■■■□□ 2.19
SYNDIG1-201ENST00000376862 ARHGEF12Q9NZN5 1544 aa28.68■■■□□ 2.18
SYNDIG1-201ENST00000376862 RGS3P49796 1198 aa28.68■■■□□ 2.18
SYNDIG1-201ENST00000376862 ZMYM4Q5VZL5 1548 aa28.68■■■□□ 2.18
SYNDIG1-201ENST00000376862 PER1O15534 1290 aaPredicted RBP28.67■■■□□ 2.18
SYNDIG1-201ENST00000376862 CC2D1BQ5T0F9 858 aaKnown RBP28.67■■■□□ 2.18
SYNDIG1-201ENST00000376862 MAGI1Q96QZ7 1491 aaPredicted RBP28.66■■■□□ 2.18
SYNDIG1-201ENST00000376862 CAMSAP2Q08AD1 1489 aa28.66■■■□□ 2.18
SYNDIG1-201ENST00000376862 POGKQ9P215 609 aa28.65■■■□□ 2.18
SYNDIG1-201ENST00000376862 PLEKHH2Q8IVE3 1493 aa28.63■■■□□ 2.17
SYNDIG1-201ENST00000376862 RRAGDQ9NQL2 400 aaPredicted RBP28.63■■■□□ 2.17
SYNDIG1-201ENST00000376862 INSRP06213 1382 aa28.62■■■□□ 2.17
SYNDIG1-201ENST00000376862 SYNJ2O15056 1496 aa28.62■■■□□ 2.17
SYNDIG1-201ENST00000376862 NUP153P49790 1475 aaKnown RBP28.61■■■□□ 2.17
SYNDIG1-201ENST00000376862 CEP170Q5SW79 1584 aa28.61■■■□□ 2.17
SYNDIG1-201ENST00000376862 ADGRL2O95490 1459 aa28.59■■■□□ 2.17
SYNDIG1-201ENST00000376862 RAPGEF6Q8TEU7 1601 aa28.59■■■□□ 2.17
SYNDIG1-201ENST00000376862 CROCC2H7BZ55 1655 aa28.57■■■□□ 2.16
SYNDIG1-201ENST00000376862 CFDP1Q9UEE9 299 aaPredicted RBP28.57■■■□□ 2.16
SYNDIG1-201ENST00000376862 ZNF777Q9ULD5 760 aaPredicted RBP28.56■■■□□ 2.16
SYNDIG1-201ENST00000376862 ANKRD50Q9ULJ7 1429 aa28.55■■■□□ 2.16
SYNDIG1-201ENST00000376862 NUP155O75694 1391 aa28.55■■■□□ 2.16
SYNDIG1-201ENST00000376862 DUSP27Q5VZP5 1158 aa28.54■■■□□ 2.16
SYNDIG1-201ENST00000376862 ANKRD30AQ9BXX3 1397 aa28.53■■■□□ 2.16
SYNDIG1-201ENST00000376862 ADAMTS8Q9UP79 889 aa28.53■■■□□ 2.16
SYNDIG1-201ENST00000376862 USP19O94966 1318 aa28.53■■■□□ 2.16
SYNDIG1-201ENST00000376862 VIRMAQ69YN4 1812 aaKnown RBP28.53■■■□□ 2.16
SYNDIG1-201ENST00000376862 PLEKHH1Q9ULM0 1364 aa28.52■■■□□ 2.16
SYNDIG1-201ENST00000376862 PLB1Q6P1J6 1458 aa28.5■■■□□ 2.15
SYNDIG1-201ENST00000376862 JPH4Q96JJ6 628 aa28.49■■■□□ 2.15
SYNDIG1-201ENST00000376862 PANK3Q9H999 370 aa28.49■■■□□ 2.15
SYNDIG1-201ENST00000376862 PRG4Q92954 1404 aaPredicted RBP28.48■■■□□ 2.15
SYNDIG1-201ENST00000376862 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.48■■■□□ 2.15
SYNDIG1-201ENST00000376862 TRPM1Q7Z4N2 1603 aa28.48■■■□□ 2.15
SYNDIG1-201ENST00000376862 ITSN2Q9NZM3 1697 aa28.48■■■□□ 2.15
SYNDIG1-201ENST00000376862 PKNOX2Q96KN3 472 aa28.46■■■□□ 2.15
SYNDIG1-201ENST00000376862 SLKQ9H2G2 1235 aaPredicted RBP28.46■■■□□ 2.15
SYNDIG1-201ENST00000376862 DISP3Q9P2K9 1392 aa28.46■■■□□ 2.15
SYNDIG1-201ENST00000376862 L1TD1Q5T7N2 865 aaKnown RBP28.46■■■□□ 2.15
SYNDIG1-201ENST00000376862 COL17A1Q9UMD9 1497 aaPredicted RBP28.46■■■□□ 2.15
SYNDIG1-201ENST00000376862 KDM5DQ9BY66 1539 aa28.45■■■□□ 2.14
SYNDIG1-201ENST00000376862 GPATCH8Q9UKJ3 1502 aaKnown RBP28.45■■■□□ 2.14
SYNDIG1-201ENST00000376862 NBPF1Q3BBV0 1214 aa28.45■■■□□ 2.14
SYNDIG1-201ENST00000376862 NUP160Q12769 1436 aa28.44■■■□□ 2.14
SYNDIG1-201ENST00000376862 SEC24BO95487 1268 aa28.44■■■□□ 2.14
SYNDIG1-201ENST00000376862 CARMIL2Q6F5E8 1435 aa28.43■■■□□ 2.14
SYNDIG1-201ENST00000376862 PRAG1Q86YV5 1406 aa28.42■■■□□ 2.14
SYNDIG1-201ENST00000376862 GOLGA2Q08379 1002 aa28.41■■■□□ 2.14
SYNDIG1-201ENST00000376862 ZNF521Q96K83 1311 aa28.41■■■□□ 2.14
SYNDIG1-201ENST00000376862 TROQ12816 1431 aaPredicted RBP28.4■■■□□ 2.14
SYNDIG1-201ENST00000376862 ARXQ96QS3 562 aa28.4■■■□□ 2.14
SYNDIG1-201ENST00000376862 BECN1Q14457 450 aa28.39■■■□□ 2.14
SYNDIG1-201ENST00000376862 IGHDP01880 384 aa28.38■■■□□ 2.13
SYNDIG1-201ENST00000376862 TESK2Q96S53 571 aa28.38■■■□□ 2.13
SYNDIG1-201ENST00000376862 EIF3AQ14152 1382 aaKnown RBP28.37■■■□□ 2.13
SYNDIG1-201ENST00000376862 WDR43Q15061 677 aaKnown RBP eCLIP28.36■■■□□ 2.13
SYNDIG1-201ENST00000376862 NAP1L5Q96NT1 182 aaPredicted RBP28.35■■■□□ 2.13
SYNDIG1-201ENST00000376862 SLFN5Q08AF3 891 aa28.34■■■□□ 2.13
SYNDIG1-201ENST00000376862 GLIPR1L2Q4G1C9 344 aa28.34■■■□□ 2.13
SYNDIG1-201ENST00000376862 ANTXR1Q9H6X2 564 aa28.34■■■□□ 2.13
SYNDIG1-201ENST00000376862 XRCC6P12956 609 aaKnown RBP eCLIP28.33■■■□□ 2.13
SYNDIG1-201ENST00000376862 ERBINQ96RT1 1412 aa28.33■■■□□ 2.13
SYNDIG1-201ENST00000376862 NLRP1Q9C000 1473 aa28.32■■■□□ 2.12
SYNDIG1-201ENST00000376862 BCAR3O75815 825 aa28.32■■■□□ 2.12
SYNDIG1-201ENST00000376862 RGL3Q3MIN7 710 aa28.32■■■□□ 2.12
SYNDIG1-201ENST00000376862 C9orf84Q5VXU9 1444 aa28.31■■■□□ 2.12
SYNDIG1-201ENST00000376862 GPRASP1Q5JY77 1395 aa28.3■■■□□ 2.12
SYNDIG1-201ENST00000376862 PPP2R1AP30153 589 aa28.3■■■□□ 2.12
SYNDIG1-201ENST00000376862 CDC42BPAQ5VT25 1732 aa28.29■■■□□ 2.12
SYNDIG1-201ENST00000376862 PRDM15P57071 1507 aaPredicted RBP28.29■■■□□ 2.12
SYNDIG1-201ENST00000376862 PNNQ9H307 717 aaKnown RBP28.29■■■□□ 2.12
SYNDIG1-201ENST00000376862 SPINK5Q9NQ38 1064 aaPredicted RBP28.29■■■□□ 2.12
SYNDIG1-201ENST00000376862 PTPRGP23470 1445 aa28.28■■■□□ 2.12
SYNDIG1-201ENST00000376862 PANK2Q9BZ23 570 aa28.28■■■□□ 2.12
SYNDIG1-201ENST00000376862 GOLGA6L3A6NEY3 463 aa28.27■■■□□ 2.12
SYNDIG1-201ENST00000376862 VSIG10Q8N0Z9 540 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms