RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 TSHZ2Q9NRE2 1034 aa13.87□□□□□ -0.19
MDC1-201ENST00000376406 CCDC9Q9Y3X0 531 aaKnown RBP13.87□□□□□ -0.19
MDC1-201ENST00000376406 DNTTIP2Q5QJE6 756 aaKnown RBP13.87□□□□□ -0.19
MDC1-201ENST00000376406 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
MDC1-201ENST00000376406 DEKP35659 375 aaKnown RBP13.86□□□□□ -0.19
MDC1-201ENST00000376406 U2AF1L5P0DN76 240 aaPredicted RBP13.86□□□□□ -0.19
MDC1-201ENST00000376406 U2AF1Q01081 240 aaKnown RBP eCLIP13.86□□□□□ -0.19
MDC1-201ENST00000376406 FYCO1Q9BQS8 1478 aa13.86□□□□□ -0.19
MDC1-201ENST00000376406 POGZQ7Z3K3 1410 aa13.85□□□□□ -0.19
MDC1-201ENST00000376406 CASKIN1Q8WXD9 1431 aa13.85□□□□□ -0.19
MDC1-201ENST00000376406 EVC2Q86UK5 1308 aa13.85□□□□□ -0.19
MDC1-201ENST00000376406 GOLGA6L6A8MZA4 724 aa13.85□□□□□ -0.19
MDC1-201ENST00000376406 ITPRIPQ8IWB1 547 aa13.85□□□□□ -0.19
MDC1-201ENST00000376406 KCNJ4P48050 445 aa13.84□□□□□ -0.19
MDC1-201ENST00000376406 USP47Q96K76 1375 aa13.84□□□□□ -0.19
MDC1-201ENST00000376406 NAP1L5Q96NT1 182 aaPredicted RBP13.84□□□□□ -0.19
MDC1-201ENST00000376406 FGD1P98174 961 aa13.84□□□□□ -0.19
MDC1-201ENST00000376406 SOX12O15370 315 aa13.83□□□□□ -0.19
MDC1-201ENST00000376406 AMPHP49418 695 aa13.83□□□□□ -0.2
MDC1-201ENST00000376406 TPRNQ4KMQ1 711 aa13.83□□□□□ -0.2
MDC1-201ENST00000376406 ZBED9Q6R2W3 1325 aa13.83□□□□□ -0.2
MDC1-201ENST00000376406 AQRO60306 1485 aaKnown RBP eCLIP13.83□□□□□ -0.22e-6■■□□□ 14.3
MDC1-201ENST00000376406 IPO9Q96P70 1041 aaKnown RBP13.82□□□□□ -0.2
MDC1-201ENST00000376406 STK31Q9BXU1 1019 aa13.81□□□□□ -0.2
MDC1-201ENST00000376406 CENPJQ9HC77 1338 aaPredicted RBP13.8□□□□□ -0.2
MDC1-201ENST00000376406 EVA1CP58658 441 aa13.8□□□□□ -0.2
MDC1-201ENST00000376406 GPATCH3Q96I76 525 aa13.8□□□□□ -0.2
MDC1-201ENST00000376406 PRG4Q92954 1404 aaPredicted RBP13.8□□□□□ -0.2
MDC1-201ENST00000376406 GBP4Q96PP9 640 aa13.8□□□□□ -0.2
MDC1-201ENST00000376406 PRKRIP1Q9H875 184 aaPredicted RBP13.8□□□□□ -0.2
MDC1-201ENST00000376406 EHBP1L1Q8N3D4 1523 aa13.8□□□□□ -0.2
MDC1-201ENST00000376406 ST20-MTHFSA0A0A6YYL1 179 aa13.79□□□□□ -0.2
MDC1-201ENST00000376406 SPRYD3Q8NCJ5 442 aa13.79□□□□□ -0.2
MDC1-201ENST00000376406 RRBP1Q9P2E9 1410 aaKnown RBP13.79□□□□□ -0.2
MDC1-201ENST00000376406 NCOA2Q15596 1464 aa13.79□□□□□ -0.2
MDC1-201ENST00000376406 CCDC146Q8IYE0 955 aa13.79□□□□□ -0.2
MDC1-201ENST00000376406 HMGB2P26583 209 aaKnown RBP13.78□□□□□ -0.2
MDC1-201ENST00000376406 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
MDC1-201ENST00000376406 RTN4Q9NQC3 1192 aaKnown RBP13.78□□□□□ -0.2
MDC1-201ENST00000376406 SMC4Q9NTJ3 1288 aa13.78□□□□□ -0.2
MDC1-201ENST00000376406 ATF3P18847 181 aa13.78□□□□□ -0.2
MDC1-201ENST00000376406 PANK3Q9H999 370 aa13.78□□□□□ -0.2
MDC1-201ENST00000376406 MIA2Q96PC5 1412 aa13.77□□□□□ -0.2
MDC1-201ENST00000376406 ARAP1Q96P48 1450 aa13.77□□□□□ -0.2
MDC1-201ENST00000376406 MAGI1Q96QZ7 1491 aaPredicted RBP13.77□□□□□ -0.2
MDC1-201ENST00000376406 CGNL1Q0VF96 1302 aa13.77□□□□□ -0.21
MDC1-201ENST00000376406 IQGAP2Q13576 1575 aa13.76□□□□□ -0.21
MDC1-201ENST00000376406 GOLGA6L4A6NEF3 574 aa13.76□□□□□ -0.21
MDC1-201ENST00000376406 MSNP26038 577 aaKnown RBP13.76□□□□□ -0.21
MDC1-201ENST00000376406 PLCB2Q00722 1185 aa13.76□□□□□ -0.21
MDC1-201ENST00000376406 SNAPC4Q5SXM2 1469 aa13.76□□□□□ -0.21
MDC1-201ENST00000376406 MEX3CQ5U5Q3 659 aaKnown RBP13.75□□□□□ -0.21
MDC1-201ENST00000376406 CNTLNQ9NXG0 1405 aa13.75□□□□□ -0.21
MDC1-201ENST00000376406 BICRAQ9NZM4 1560 aa13.75□□□□□ -0.21
MDC1-201ENST00000376406 KIAA1211Q6ZU35 1233 aa13.75□□□□□ -0.21
MDC1-201ENST00000376406 COG3Q96JB2 828 aa13.75□□□□□ -0.21
MDC1-201ENST00000376406 CENPQQ7L2Z9 268 aaPredicted RBP13.74□□□□□ -0.21
MDC1-201ENST00000376406 POLA1P09884 1462 aaPredicted RBP13.74□□□□□ -0.21
MDC1-201ENST00000376406 G3V3G9 751 aa13.74□□□□□ -0.21
MDC1-201ENST00000376406 DCAF8Q5TAQ9 597 aa13.74□□□□□ -0.21
MDC1-201ENST00000376406 TIAM1Q13009 1591 aa13.74□□□□□ -0.21
MDC1-201ENST00000376406 TAF7LQ5H9L4 462 aa13.74□□□□□ -0.21
MDC1-201ENST00000376406 C1orf141Q5JVX7 400 aa13.74□□□□□ -0.21
MDC1-201ENST00000376406 NRDCO43847 1150 aa13.74□□□□□ -0.21
MDC1-201ENST00000376406 NAP1L2Q9ULW6 460 aaPredicted RBP13.74□□□□□ -0.21
MDC1-201ENST00000376406 RRP1P56182 461 aaKnown RBP13.73□□□□□ -0.21
MDC1-201ENST00000376406 NESP48681 1621 aa13.73□□□□□ -0.21
MDC1-201ENST00000376406 HMMRO75330 724 aa13.73□□□□□ -0.21
MDC1-201ENST00000376406 CHAF1AQ13111 956 aaPredicted RBP13.72□□□□□ -0.21
MDC1-201ENST00000376406 PSME1Q06323 249 aa13.72□□□□□ -0.21
MDC1-201ENST00000376406 WASHC2AQ641Q2 1341 aa13.72□□□□□ -0.21
MDC1-201ENST00000376406 E9PSI1 815 aa13.72□□□□□ -0.21
MDC1-201ENST00000376406 NGEFQ8N5V2 710 aa13.72□□□□□ -0.21
MDC1-201ENST00000376406 ANO8Q9HCE9 1232 aaPredicted RBP13.72□□□□□ -0.21
MDC1-201ENST00000376406 CCDC7Q96M83 1385 aa13.72□□□□□ -0.21
MDC1-201ENST00000376406 PEG3Q9GZU2 1588 aa13.71□□□□□ -0.21
MDC1-201ENST00000376406 MFAP1P55081 439 aaKnown RBP13.71□□□□□ -0.22
MDC1-201ENST00000376406 KIF14Q15058 1648 aa13.7□□□□□ -0.22
MDC1-201ENST00000376406 APBB1O00213 710 aa13.7□□□□□ -0.22
MDC1-201ENST00000376406 SCAPERQ9BY12 1400 aa13.7□□□□□ -0.22
MDC1-201ENST00000376406 TRAK1Q9UPV9 953 aa13.69□□□□□ -0.22
MDC1-201ENST00000376406 GORABQ5T7V8 394 aa13.69□□□□□ -0.22
MDC1-201ENST00000376406 THEMISQ8N1K5 641 aaPredicted RBP13.69□□□□□ -0.22
MDC1-201ENST00000376406 GTF2E1P29083 439 aaPredicted RBP13.69□□□□□ -0.22
MDC1-201ENST00000376406 SLKQ9H2G2 1235 aaPredicted RBP13.69□□□□□ -0.22
MDC1-201ENST00000376406 SYAP1Q96A49 352 aaPredicted RBP13.68□□□□□ -0.22
MDC1-201ENST00000376406 PRXQ9BXM0 1461 aa13.68□□□□□ -0.22
MDC1-201ENST00000376406 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
MDC1-201ENST00000376406 KIAA0586Q9BVV6 1533 aa13.67□□□□□ -0.22
MDC1-201ENST00000376406 LRRFIP1Q32MZ4 808 aaKnown RBP13.67□□□□□ -0.22
MDC1-201ENST00000376406 NUTM2DQ5VT03 806 aaPredicted RBP13.67□□□□□ -0.22
MDC1-201ENST00000376406 FAM161AQ3B820 660 aa13.67□□□□□ -0.22
MDC1-201ENST00000376406 ABCA10Q8WWZ4 1543 aa13.66□□□□□ -0.22
MDC1-201ENST00000376406 USP35Q9P2H5 1018 aa13.66□□□□□ -0.22
MDC1-201ENST00000376406 DRC7Q8IY82 874 aa13.66□□□□□ -0.22
MDC1-201ENST00000376406 ANKRD50Q9ULJ7 1429 aa13.66□□□□□ -0.22
MDC1-201ENST00000376406 CHMP4CQ96CF2 233 aa13.65□□□□□ -0.22
MDC1-201ENST00000376406 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
MDC1-201ENST00000376406 TAOK2Q9UL54 1235 aa13.65□□□□□ -0.22
MDC1-201ENST00000376406 KIF7Q2M1P5 1343 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms