RNA–Protein interactions for RNA: ENST00000374945.1

LINC01993-201, Transcript of long intergenic non-protein coding RNA 1993, humanhuman

TSL 2 BASIC

Gene LINC01993, Length 2,934 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01993-201ENST00000374945 ARHGEF12Q9NZN5 1544 aa17.58■□□□□ 0.41
LINC01993-201ENST00000374945 SPATA31E1Q6ZUB1 1445 aa17.57■□□□□ 0.4
LINC01993-201ENST00000374945 AFAP1Q8N556 730 aa17.57■□□□□ 0.4
LINC01993-201ENST00000374945 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
LINC01993-201ENST00000374945 SHANK2Q9UPX8 1470 aa17.56■□□□□ 0.4
LINC01993-201ENST00000374945 KIF7Q2M1P5 1343 aa17.56■□□□□ 0.4
LINC01993-201ENST00000374945 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
LINC01993-201ENST00000374945 KIAA1107Q9UPP5 1409 aa17.55■□□□□ 0.4
LINC01993-201ENST00000374945 TEX14Q8IWB6 1497 aa17.55■□□□□ 0.4
LINC01993-201ENST00000374945 MYO5CQ9NQX4 1742 aa17.55■□□□□ 0.4
LINC01993-201ENST00000374945 RTL5Q5HYW3 569 aaPredicted RBP17.55■□□□□ 0.4
LINC01993-201ENST00000374945 ZBTB47Q9UFB7 747 aaPredicted RBP17.55■□□□□ 0.4
LINC01993-201ENST00000374945 KDM2AQ9Y2K7 1162 aa17.55■□□□□ 0.4
LINC01993-201ENST00000374945 CCDC136Q96JN2 1154 aa17.54■□□□□ 0.4
LINC01993-201ENST00000374945 SALL2Q9Y467 1007 aaPredicted RBP17.53■□□□□ 0.4
LINC01993-201ENST00000374945 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
LINC01993-201ENST00000374945 EFCAB2Q5VUJ9 269 aa17.53■□□□□ 0.4
LINC01993-201ENST00000374945 TRAPPC8Q9Y2L5 1435 aa17.52■□□□□ 0.4
LINC01993-201ENST00000374945 IL27Q8NEV9 243 aa17.51■□□□□ 0.39
LINC01993-201ENST00000374945 DHX29Q7Z478 1369 aaKnown RBP17.51■□□□□ 0.39
LINC01993-201ENST00000374945 PLCH2O75038 1416 aa17.51■□□□□ 0.39
LINC01993-201ENST00000374945 UHRF1BP1LA0JNW5 1464 aa17.51■□□□□ 0.39
LINC01993-201ENST00000374945 PLEKHH2Q8IVE3 1493 aa17.51■□□□□ 0.39
LINC01993-201ENST00000374945 CNGB1Q14028 1251 aaPredicted RBP17.51■□□□□ 0.39
LINC01993-201ENST00000374945 RGL3Q3MIN7 710 aa17.49■□□□□ 0.39
LINC01993-201ENST00000374945 POLR3GLQ9BT43 218 aa17.49■□□□□ 0.39
LINC01993-201ENST00000374945 RSPH4AQ5TD94 716 aa17.47■□□□□ 0.39
LINC01993-201ENST00000374945 WDR7Q9Y4E6 1490 aa17.46■□□□□ 0.39
LINC01993-201ENST00000374945 DCAF11Q8TEB1 546 aa17.45■□□□□ 0.38
LINC01993-201ENST00000374945 BCORL1Q5H9F3 1711 aa17.45■□□□□ 0.38
LINC01993-201ENST00000374945 FAM135AQ9P2D6 1515 aa17.45■□□□□ 0.38
LINC01993-201ENST00000374945 ASXL2Q76L83 1435 aa17.45■□□□□ 0.38
LINC01993-201ENST00000374945 SPAG9O60271 1321 aaKnown RBP17.43■□□□□ 0.38
LINC01993-201ENST00000374945 ABCC1P33527 1531 aa17.42■□□□□ 0.38
LINC01993-201ENST00000374945 NPM1P06748 294 aaKnown RBP eCLIP17.4■□□□□ 0.38
LINC01993-201ENST00000374945 FANCAO15360 1455 aa17.4■□□□□ 0.38
LINC01993-201ENST00000374945 WASHC2CQ9Y4E1 1318 aa17.39■□□□□ 0.37
LINC01993-201ENST00000374945 RTN4Q9NQC3 1192 aaKnown RBP17.38■□□□□ 0.37
LINC01993-201ENST00000374945 USP35Q9P2H5 1018 aa17.37■□□□□ 0.37
LINC01993-201ENST00000374945 SCAPERQ9BY12 1400 aa17.37■□□□□ 0.37
LINC01993-201ENST00000374945 PNISRQ8TF01 805 aaKnown RBP17.37■□□□□ 0.37
LINC01993-201ENST00000374945 KDM5DQ9BY66 1539 aa17.37■□□□□ 0.37
LINC01993-201ENST00000374945 CYB5RLQ6IPT4 315 aa17.36■□□□□ 0.37
LINC01993-201ENST00000374945 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
LINC01993-201ENST00000374945 PLA2R1Q13018 1463 aa17.36■□□□□ 0.37
LINC01993-201ENST00000374945 MAST1Q9Y2H9 1570 aa17.35■□□□□ 0.37
LINC01993-201ENST00000374945 SENP3-EIF4A1A0A087X0R7 540 aa17.35■□□□□ 0.37
LINC01993-201ENST00000374945 TCERG1O14776 1098 aaKnown RBP17.35■□□□□ 0.37
LINC01993-201ENST00000374945 NEFMP07197 916 aa17.35■□□□□ 0.37
LINC01993-201ENST00000374945 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
LINC01993-201ENST00000374945 USP47Q96K76 1375 aa17.35■□□□□ 0.37
LINC01993-201ENST00000374945 CARD11Q9BXL7 1154 aa17.35■□□□□ 0.37
LINC01993-201ENST00000374945 CCDC144AA2RUR9 1427 aa17.35■□□□□ 0.37
LINC01993-201ENST00000374945 KDM5CP41229 1560 aa17.34■□□□□ 0.37
LINC01993-201ENST00000374945 ADGRL1O94910 1474 aa17.34■□□□□ 0.37
LINC01993-201ENST00000374945 LRPPRCP42704 1394 aaKnown RBP17.34■□□□□ 0.37
LINC01993-201ENST00000374945 PDE4AP27815 886 aa17.34■□□□□ 0.37
LINC01993-201ENST00000374945 PLXNC1O60486 1568 aa17.33■□□□□ 0.37
LINC01993-201ENST00000374945 KIF3BO15066 747 aa17.33■□□□□ 0.37
LINC01993-201ENST00000374945 RRP1P56182 461 aaKnown RBP17.33■□□□□ 0.37
LINC01993-201ENST00000374945 DUOX2Q9NRD8 1548 aa17.33■□□□□ 0.36
LINC01993-201ENST00000374945 BACH2Q9BYV9 841 aa17.33■□□□□ 0.36
LINC01993-201ENST00000374945 EXOC6Q8TAG9 804 aa17.32■□□□□ 0.36
LINC01993-201ENST00000374945 NBPF1Q3BBV0 1214 aa17.32■□□□□ 0.36
LINC01993-201ENST00000374945 ZFYVE16Q7Z3T8 1539 aa17.31■□□□□ 0.36
LINC01993-201ENST00000374945 UNC13BO14795 1591 aa17.3■□□□□ 0.36
LINC01993-201ENST00000374945 ST20-MTHFSA0A0A6YYL1 179 aa17.3■□□□□ 0.36
LINC01993-201ENST00000374945 ABCA9Q8IUA7 1624 aa17.3■□□□□ 0.36
LINC01993-201ENST00000374945 MS4A1P11836 297 aa17.28■□□□□ 0.36
LINC01993-201ENST00000374945 ERBINQ96RT1 1412 aa17.28■□□□□ 0.36
LINC01993-201ENST00000374945 ARID4BQ4LE39 1312 aaPredicted RBP17.28■□□□□ 0.36
LINC01993-201ENST00000374945 PPM1GO15355 546 aaPredicted RBP17.27■□□□□ 0.36
LINC01993-201ENST00000374945 RAPGEF3O95398 923 aa17.27■□□□□ 0.36
LINC01993-201ENST00000374945 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.27■□□□□ 0.35
LINC01993-201ENST00000374945 ROCK2O75116 1388 aaKnown RBP17.26■□□□□ 0.35
LINC01993-201ENST00000374945 CD109Q6YHK3 1445 aa17.26■□□□□ 0.35
LINC01993-201ENST00000374945 IQGAP3Q86VI3 1631 aa17.26■□□□□ 0.35
LINC01993-201ENST00000374945 ATP7AQ04656 1500 aa17.26■□□□□ 0.35
LINC01993-201ENST00000374945 TMC1Q8TDI8 760 aa17.25■□□□□ 0.35
LINC01993-201ENST00000374945 E9PCH4 1651 aa17.25■□□□□ 0.35
LINC01993-201ENST00000374945 BRD4O60885 1362 aaPredicted RBP17.24■□□□□ 0.35
LINC01993-201ENST00000374945 A2MP01023 1474 aa17.23■□□□□ 0.35
LINC01993-201ENST00000374945 RCAN3Q9UKA8 241 aa17.23■□□□□ 0.35
LINC01993-201ENST00000374945 RALGAPBQ86X10 1494 aa17.22■□□□□ 0.35
LINC01993-201ENST00000374945 ARAP3Q8WWN8 1544 aa17.22■□□□□ 0.35
LINC01993-201ENST00000374945 UHRF1BP1Q6BDS2 1440 aa17.22■□□□□ 0.35
LINC01993-201ENST00000374945 GGT6Q6P531 493 aa17.21■□□□□ 0.35
LINC01993-201ENST00000374945 BRPF3Q9ULD4 1205 aa17.21■□□□□ 0.35
LINC01993-201ENST00000374945 MAGI2Q86UL8 1455 aa17.21■□□□□ 0.35
LINC01993-201ENST00000374945 DAXXQ9UER7 740 aaPredicted RBP17.21■□□□□ 0.35
LINC01993-201ENST00000374945 RTEL1-TNFRSF6BF6WH68 1400 aa17.2■□□□□ 0.34
LINC01993-201ENST00000374945 PRAG1Q86YV5 1406 aa17.2■□□□□ 0.34
LINC01993-201ENST00000374945 MYBBP1AQ9BQG0 1328 aaKnown RBP17.19■□□□□ 0.34
LINC01993-201ENST00000374945 INO80Q9ULG1 1556 aaPredicted RBP17.19■□□□□ 0.34
LINC01993-201ENST00000374945 GSE1Q14687 1217 aa17.18■□□□□ 0.34
LINC01993-201ENST00000374945 KTN1Q86UP2 1357 aaKnown RBP17.18■□□□□ 0.34
LINC01993-201ENST00000374945 CFAP65Q6ZU64 1925 aaKnown RBP17.18■□□□□ 0.34
LINC01993-201ENST00000374945 SENP3Q9H4L4 574 aaPredicted RBP17.17■□□□□ 0.34
LINC01993-201ENST00000374945 UGGT1Q9NYU2 1555 aa17.17■□□□□ 0.34
LINC01993-201ENST00000374945 KIDINS220Q9ULH0 1771 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms