RNA–Protein interactions for RNA: ENST00000374907.7

ITGAV-202, Transcript of integrin subunit alpha V, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGAV, Length 6,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-202ENST00000374907 PKD2Q13563 968 aa20.46■□□□□ 0.87
ITGAV-202ENST00000374907 CCAR1Q8IX12 1150 aaKnown RBP20.46■□□□□ 0.87
ITGAV-202ENST00000374907 RBM33Q96EV2 1170 aaKnown RBP20.46■□□□□ 0.87
ITGAV-202ENST00000374907 KTN1Q86UP2 1357 aaKnown RBP20.45■□□□□ 0.86
ITGAV-202ENST00000374907 MFAP1P55081 439 aaKnown RBP20.44■□□□□ 0.86
ITGAV-202ENST00000374907 NOP58Q9Y2X3 529 aaKnown RBP20.44■□□□□ 0.86
ITGAV-202ENST00000374907 SYNE3Q6ZMZ3 975 aa20.44■□□□□ 0.86
ITGAV-202ENST00000374907 H3BQV1 296 aa20.44■□□□□ 0.86
ITGAV-202ENST00000374907 IFFO2Q5TF58 517 aa20.44■□□□□ 0.86
ITGAV-202ENST00000374907 TPM2P07951 284 aa20.44■□□□□ 0.86
ITGAV-202ENST00000374907 CCDC146Q8IYE0 955 aa20.43■□□□□ 0.86
ITGAV-202ENST00000374907 APPP05067 770 aa20.43■□□□□ 0.86
ITGAV-202ENST00000374907 RWDD1Q9H446 243 aaPredicted RBP20.42■□□□□ 0.86
ITGAV-202ENST00000374907 SYAP1Q96A49 352 aaPredicted RBP20.42■□□□□ 0.86
ITGAV-202ENST00000374907 PCMTD1Q96MG8 357 aaPredicted RBP20.42■□□□□ 0.86
ITGAV-202ENST00000374907 GBP4Q96PP9 640 aa20.42■□□□□ 0.86
ITGAV-202ENST00000374907 PATL2C9JE40 543 aaKnown RBP20.42■□□□□ 0.86
ITGAV-202ENST00000374907 TSR1Q2NL82 804 aaKnown RBP20.42■□□□□ 0.86
ITGAV-202ENST00000374907 KIF16BQ96L93 1317 aa20.41■□□□□ 0.86
ITGAV-202ENST00000374907 EFCAB2Q5VUJ9 269 aa20.41■□□□□ 0.86
ITGAV-202ENST00000374907 CYB5RLQ6IPT4 315 aa20.41■□□□□ 0.86
ITGAV-202ENST00000374907 EIF2S2P20042 333 aaKnown RBP20.4■□□□□ 0.86
ITGAV-202ENST00000374907 RILPL2Q969X0 211 aa20.4■□□□□ 0.86
ITGAV-202ENST00000374907 PSME1Q06323 249 aa20.4■□□□□ 0.86
ITGAV-202ENST00000374907 FYB1O15117 783 aa20.39■□□□□ 0.85
ITGAV-202ENST00000374907 CARMIL2Q6F5E8 1435 aa20.39■□□□□ 0.85
ITGAV-202ENST00000374907 CSPP1Q1MSJ5 1256 aa20.39■□□□□ 0.85
ITGAV-202ENST00000374907 FAM184AQ8NB25 1140 aa20.38■□□□□ 0.85
ITGAV-202ENST00000374907 SLC4A3P48751 1232 aa20.38■□□□□ 0.85
ITGAV-202ENST00000374907 EIF3AQ14152 1382 aaKnown RBP20.38■□□□□ 0.85
ITGAV-202ENST00000374907 PAF1Q8N7H5 531 aa20.37■□□□□ 0.85
ITGAV-202ENST00000374907 NECTIN2Q92692 538 aa20.37■□□□□ 0.85
ITGAV-202ENST00000374907 CEP162Q5TB80 1403 aa20.36■□□□□ 0.85
ITGAV-202ENST00000374907 CLUAP1Q96AJ1 413 aa20.36■□□□□ 0.85
ITGAV-202ENST00000374907 TEFQ10587 303 aa20.36■□□□□ 0.85
ITGAV-202ENST00000374907 TMEM132AQ24JP5 1023 aa20.36■□□□□ 0.85
ITGAV-202ENST00000374907 TRAK1Q9UPV9 953 aa20.36■□□□□ 0.85
ITGAV-202ENST00000374907 R3HCC1Q9Y3T6 440 aaKnown RBP20.36■□□□□ 0.85
ITGAV-202ENST00000374907 LMOD3Q0VAK6 560 aa20.35■□□□□ 0.85
ITGAV-202ENST00000374907 SLKQ9H2G2 1235 aaPredicted RBP20.35■□□□□ 0.85
ITGAV-202ENST00000374907 MCTP1Q6DN14 999 aa20.34■□□□□ 0.85
ITGAV-202ENST00000374907 HNRNPMP52272 730 aaKnown RBP eCLIP20.34■□□□□ 0.85
ITGAV-202ENST00000374907 MTMR7Q9Y216 660 aa20.34■□□□□ 0.85
ITGAV-202ENST00000374907 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.85
ITGAV-202ENST00000374907 ATF3P18847 181 aa20.33■□□□□ 0.85
ITGAV-202ENST00000374907 KIF3AQ9Y496 699 aa20.33■□□□□ 0.84
ITGAV-202ENST00000374907 IKQ13123 557 aaPredicted RBP20.33■□□□□ 0.84
ITGAV-202ENST00000374907 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.32■□□□□ 0.84
ITGAV-202ENST00000374907 CCAR2Q8N163 923 aaKnown RBP20.32■□□□□ 0.84
ITGAV-202ENST00000374907 NEXNQ0ZGT2 675 aa20.32■□□□□ 0.84
ITGAV-202ENST00000374907 ELL2O00472 640 aaPredicted RBP20.32■□□□□ 0.84
ITGAV-202ENST00000374907 TRIM29Q14134 588 aa20.31■□□□□ 0.84
ITGAV-202ENST00000374907 CCDC27Q2M243 656 aa20.31■□□□□ 0.84
ITGAV-202ENST00000374907 PTMSP20962 102 aa20.3■□□□□ 0.84
ITGAV-202ENST00000374907 FOXD4L6Q3SYB3 417 aaPredicted RBP20.3■□□□□ 0.84
ITGAV-202ENST00000374907 FOXD4L3Q6VB84 417 aaPredicted RBP20.3■□□□□ 0.84
ITGAV-202ENST00000374907 COG3Q96JB2 828 aa20.3■□□□□ 0.84
ITGAV-202ENST00000374907 PMFBP1Q8TBY8 1022 aa20.29■□□□□ 0.84
ITGAV-202ENST00000374907 C9orf78Q9NZ63 289 aaPredicted RBP20.29■□□□□ 0.84
ITGAV-202ENST00000374907 WWC2Q6AWC2 1192 aa20.29■□□□□ 0.84
ITGAV-202ENST00000374907 NUP155O75694 1391 aa20.29■□□□□ 0.84
ITGAV-202ENST00000374907 TNNT3P45378 269 aaPredicted RBP20.29■□□□□ 0.84
ITGAV-202ENST00000374907 HSPA5P11021 654 aaKnown RBP20.29■□□□□ 0.84
ITGAV-202ENST00000374907 NFXL1Q6ZNB6 911 aa20.28■□□□□ 0.84
ITGAV-202ENST00000374907 FAM177BA6PVY3 158 aa20.27■□□□□ 0.84
ITGAV-202ENST00000374907 ODF2Q5BJF6 829 aa20.27■□□□□ 0.84
ITGAV-202ENST00000374907 RRP7AQ9Y3A4 280 aaKnown RBP20.27■□□□□ 0.84
ITGAV-202ENST00000374907 EEA1Q15075 1411 aa20.26■□□□□ 0.83
ITGAV-202ENST00000374907 CCDC47Q96A33 483 aaKnown RBP20.26■□□□□ 0.83
ITGAV-202ENST00000374907 USP35Q9P2H5 1018 aa20.26■□□□□ 0.83
ITGAV-202ENST00000374907 NUTM2BA6NNL0 878 aaPredicted RBP20.25■□□□□ 0.83
ITGAV-202ENST00000374907 NUTM2EB1AL46 878 aaPredicted RBP20.25■□□□□ 0.83
ITGAV-202ENST00000374907 TPM1P09493 284 aa20.25■□□□□ 0.83
ITGAV-202ENST00000374907 NUTM2AQ8IVF1 878 aaPredicted RBP20.25■□□□□ 0.83
ITGAV-202ENST00000374907 LRRFIP1Q32MZ4 808 aaKnown RBP20.25■□□□□ 0.83
ITGAV-202ENST00000374907 CT47A1Q5JQC4 288 aaPredicted RBP20.25■□□□□ 0.83
ITGAV-202ENST00000374907 ERICH2A1L162 156 aa20.25■□□□□ 0.83
ITGAV-202ENST00000374907 PLIN1O60240 522 aa20.25■□□□□ 0.83
ITGAV-202ENST00000374907 CUX2O14529 1486 aa20.24■□□□□ 0.83
ITGAV-202ENST00000374907 ZFYVE27Q5T4F4 411 aa20.24■□□□□ 0.83
ITGAV-202ENST00000374907 FHAD1B1AJZ9 1412 aa20.22■□□□□ 0.83
ITGAV-202ENST00000374907 FOSBP53539 338 aa20.22■□□□□ 0.83
ITGAV-202ENST00000374907 RCAN3Q9UKA8 241 aa20.22■□□□□ 0.83
ITGAV-202ENST00000374907 CARMIL1Q5VZK9 1371 aa20.22■□□□□ 0.83
ITGAV-202ENST00000374907 DCAF1Q9Y4B6 1507 aa20.21■□□□□ 0.83
ITGAV-202ENST00000374907 IBSPP21815 317 aaPredicted RBP20.21■□□□□ 0.83
ITGAV-202ENST00000374907 ST18O60284 1047 aa20.2■□□□□ 0.83
ITGAV-202ENST00000374907 PIP4K2BP78356 416 aa20.2■□□□□ 0.82
ITGAV-202ENST00000374907 CPLX2Q6PUV4 134 aaKnown RBP20.19■□□□□ 0.82
ITGAV-202ENST00000374907 VSIG10Q8N0Z9 540 aa20.19■□□□□ 0.82
ITGAV-202ENST00000374907 DIAPH3Q9NSV4 1193 aa20.19■□□□□ 0.82
ITGAV-202ENST00000374907 KDM4AO75164 1064 aa20.19■□□□□ 0.82
ITGAV-202ENST00000374907 MINK1Q8N4C8 1332 aaPredicted RBP20.19■□□□□ 0.82
ITGAV-202ENST00000374907 TCERG1O14776 1098 aaKnown RBP20.19■□□□□ 0.82
ITGAV-202ENST00000374907 TRDNQ13061 729 aa20.19■□□□□ 0.82
ITGAV-202ENST00000374907 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
ITGAV-202ENST00000374907 GOLGA6L19H0YKK7 550 aa20.18■□□□□ 0.82
ITGAV-202ENST00000374907 CCDC70Q6NSX1 233 aa20.18■□□□□ 0.82
ITGAV-202ENST00000374907 CCDC180Q9P1Z9 1646 aa20.18■□□□□ 0.82
ITGAV-202ENST00000374907 NUTM2GQ5VZR2 741 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms