RNA–Protein interactions for RNA: ENST00000374866.7

COL5A2-201, Transcript of collagen type V alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A2, Length 6,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-201ENST00000374866 IFFO2Q5TF58 517 aa13.99□□□□□ -0.17
COL5A2-201ENST00000374866 CCNB3Q8WWL7 1395 aa13.99□□□□□ -0.17
COL5A2-201ENST00000374866 ZNF592Q92610 1267 aa13.99□□□□□ -0.17
COL5A2-201ENST00000374866 DHX16O60231 1041 aaKnown RBP13.99□□□□□ -0.17
COL5A2-201ENST00000374866 TPM3P06753 285 aa13.98□□□□□ -0.17
COL5A2-201ENST00000374866 FYB1O15117 783 aa13.98□□□□□ -0.17
COL5A2-201ENST00000374866 SLC4A3P48751 1232 aa13.98□□□□□ -0.17
COL5A2-201ENST00000374866 HTATSF1O43719 755 aaKnown RBP13.98□□□□□ -0.17
COL5A2-201ENST00000374866 BCL2L13Q9BXK5 485 aa13.98□□□□□ -0.17
COL5A2-201ENST00000374866 ROCK2O75116 1388 aaKnown RBP13.97□□□□□ -0.17
COL5A2-201ENST00000374866 DCAF1Q9Y4B6 1507 aa13.97□□□□□ -0.17
COL5A2-201ENST00000374866 CEP162Q5TB80 1403 aa13.97□□□□□ -0.17
COL5A2-201ENST00000374866 ZNF428Q96B54 188 aa13.97□□□□□ -0.17
COL5A2-201ENST00000374866 EIF2S2P20042 333 aaKnown RBP13.96□□□□□ -0.18
COL5A2-201ENST00000374866 RBM19Q9Y4C8 960 aaKnown RBP13.95□□□□□ -0.18
COL5A2-201ENST00000374866 RCAN3Q9UKA8 241 aa13.95□□□□□ -0.18
COL5A2-201ENST00000374866 RWDD1Q9H446 243 aaPredicted RBP13.95□□□□□ -0.18
COL5A2-201ENST00000374866 KIF16BQ96L93 1317 aa13.94□□□□□ -0.18
COL5A2-201ENST00000374866 SYAP1Q96A49 352 aaPredicted RBP13.94□□□□□ -0.18
COL5A2-201ENST00000374866 KTN1Q86UP2 1357 aaKnown RBP13.94□□□□□ -0.18
COL5A2-201ENST00000374866 PKD2Q13563 968 aa13.94□□□□□ -0.18
COL5A2-201ENST00000374866 APPP05067 770 aa13.94□□□□□ -0.18
COL5A2-201ENST00000374866 GOLGA6L3A6NEY3 463 aa13.94□□□□□ -0.18
COL5A2-201ENST00000374866 TCERG1O14776 1098 aaKnown RBP13.94□□□□□ -0.18
COL5A2-201ENST00000374866 PTMSP20962 102 aa13.94□□□□□ -0.18
COL5A2-201ENST00000374866 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL5A2-201ENST00000374866 CALD1Q05682 793 aaKnown RBP13.93□□□□□ -0.18
COL5A2-201ENST00000374866 PPP1R1BQ9UD71 204 aaPredicted RBP13.93□□□□□ -0.18
COL5A2-201ENST00000374866 FAM184AQ8NB25 1140 aa13.93□□□□□ -0.18
COL5A2-201ENST00000374866 MYO15BQ96JP2 1530 aa13.92□□□□□ -0.18
COL5A2-201ENST00000374866 AKAP17AQ02040 695 aaKnown RBP13.92□□□□□ -0.18
COL5A2-201ENST00000374866 SKIDA1Q1XH10 827 aa13.92□□□□□ -0.18
COL5A2-201ENST00000374866 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.18
COL5A2-201ENST00000374866 VPS37DQ86XT2 251 aa13.9□□□□□ -0.18
COL5A2-201ENST00000374866 PDS5BQ9NTI5 1447 aa13.9□□□□□ -0.18
COL5A2-201ENST00000374866 GOLGA3Q08378 1498 aa13.9□□□□□ -0.18
COL5A2-201ENST00000374866 BAZ1AQ9NRL2 1556 aaPredicted RBP13.9□□□□□ -0.18
COL5A2-201ENST00000374866 KIF27Q86VH2 1401 aa13.9□□□□□ -0.19
COL5A2-201ENST00000374866 TSR1Q2NL82 804 aaKnown RBP13.9□□□□□ -0.19
COL5A2-201ENST00000374866 PLIN1O60240 522 aa13.89□□□□□ -0.19
COL5A2-201ENST00000374866 TRAK1Q9UPV9 953 aa13.89□□□□□ -0.19
COL5A2-201ENST00000374866 CYB5RLQ6IPT4 315 aa13.89□□□□□ -0.19
COL5A2-201ENST00000374866 ANKRD45Q5TZF3 282 aa13.88□□□□□ -0.19
COL5A2-201ENST00000374866 DHX37Q8IY37 1157 aaKnown RBP13.88□□□□□ -0.19
COL5A2-201ENST00000374866 CCDC34Q96HJ3 373 aa13.88□□□□□ -0.19
COL5A2-201ENST00000374866 FAM177BA6PVY3 158 aa13.88□□□□□ -0.19
COL5A2-201ENST00000374866 NOL10Q9BSC4 688 aaKnown RBP13.87□□□□□ -0.19
COL5A2-201ENST00000374866 NAP1L1P55209 391 aaKnown RBP13.87□□□□□ -0.19
COL5A2-201ENST00000374866 C1orf141Q5JVX7 400 aa13.87□□□□□ -0.19
COL5A2-201ENST00000374866 EID1Q9Y6B2 187 aa13.87□□□□□ -0.19
COL5A2-201ENST00000374866 SMARCA2P51531 1590 aa13.86□□□□□ -0.19
COL5A2-201ENST00000374866 TPM2P07951 284 aa13.86□□□□□ -0.19
COL5A2-201ENST00000374866 PMFBP1Q8TBY8 1022 aa13.86□□□□□ -0.19
COL5A2-201ENST00000374866 IBSPP21815 317 aaPredicted RBP13.86□□□□□ -0.19
COL5A2-201ENST00000374866 HMMRO75330 724 aa13.85□□□□□ -0.19
COL5A2-201ENST00000374866 SETQ01105 290 aaPredicted RBP13.85□□□□□ -0.19
COL5A2-201ENST00000374866 HNRNPMP52272 730 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL5A2-201ENST00000374866 GOLGA6L19H0YKK7 550 aa13.85□□□□□ -0.19
COL5A2-201ENST00000374866 CSPP1Q1MSJ5 1256 aa13.85□□□□□ -0.19
COL5A2-201ENST00000374866 ZFYVE27Q5T4F4 411 aa13.85□□□□□ -0.19
COL5A2-201ENST00000374866 CUX2O14529 1486 aa13.84□□□□□ -0.19
COL5A2-201ENST00000374866 KIF3BO15066 747 aa13.84□□□□□ -0.19
COL5A2-201ENST00000374866 STK11IPQ8N1F8 1099 aa13.84□□□□□ -0.19
COL5A2-201ENST00000374866 ANO2Q9NQ90 1003 aa13.84□□□□□ -0.19
COL5A2-201ENST00000374866 NFXL1Q6ZNB6 911 aa13.84□□□□□ -0.19
COL5A2-201ENST00000374866 CFAP44Q96MT7 982 aa13.84□□□□□ -0.19
COL5A2-201ENST00000374866 CCDC43Q96MW1 224 aaKnown RBP13.84□□□□□ -0.19
COL5A2-201ENST00000374866 SYNE3Q6ZMZ3 975 aa13.83□□□□□ -0.2
COL5A2-201ENST00000374866 CCDC27Q2M243 656 aa13.83□□□□□ -0.2
COL5A2-201ENST00000374866 TTLL5Q6EMB2 1281 aa13.83□□□□□ -0.2
COL5A2-201ENST00000374866 NUTM2GQ5VZR2 741 aa13.83□□□□□ -0.2
COL5A2-201ENST00000374866 AMOTL1Q8IY63 956 aa13.82□□□□□ -0.2
COL5A2-201ENST00000374866 BECN2A8MW95 431 aa13.82□□□□□ -0.2
COL5A2-201ENST00000374866 ST18O60284 1047 aa13.82□□□□□ -0.2
COL5A2-201ENST00000374866 TMEM132AQ24JP5 1023 aa13.81□□□□□ -0.2
COL5A2-201ENST00000374866 ZNF771Q7L3S4 317 aaPredicted RBP13.81□□□□□ -0.2
COL5A2-201ENST00000374866 CENPJQ9HC77 1338 aaPredicted RBP13.8□□□□□ -0.2
COL5A2-201ENST00000374866 TRIM29Q14134 588 aa13.8□□□□□ -0.2
COL5A2-201ENST00000374866 TTC5Q8N0Z6 440 aa13.8□□□□□ -0.2
COL5A2-201ENST00000374866 AIMP1Q12904 312 aaKnown RBP13.79□□□□□ -0.2
COL5A2-201ENST00000374866 C9orf78Q9NZ63 289 aaPredicted RBP13.79□□□□□ -0.2
COL5A2-201ENST00000374866 IKQ13123 557 aaPredicted RBP13.79□□□□□ -0.2
COL5A2-201ENST00000374866 PAF1Q8N7H5 531 aa13.79□□□□□ -0.2
COL5A2-201ENST00000374866 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
COL5A2-201ENST00000374866 WASHC2CQ9Y4E1 1318 aa13.79□□□□□ -0.2
COL5A2-201ENST00000374866 VSIG10Q8N0Z9 540 aa13.78□□□□□ -0.2
COL5A2-201ENST00000374866 USP35Q9P2H5 1018 aa13.78□□□□□ -0.2
COL5A2-201ENST00000374866 CT47A1Q5JQC4 288 aaPredicted RBP13.78□□□□□ -0.2
COL5A2-201ENST00000374866 SOGA1O94964 1423 aa13.78□□□□□ -0.2
COL5A2-201ENST00000374866 PHF14O94880 888 aa13.78□□□□□ -0.2
COL5A2-201ENST00000374866 CHMP4CQ96CF2 233 aa13.78□□□□□ -0.2
COL5A2-201ENST00000374866 TERF2IPQ9NYB0 399 aa13.78□□□□□ -0.2
COL5A2-201ENST00000374866 TPM1P09493 284 aa13.77□□□□□ -0.2
COL5A2-201ENST00000374866 ODF2Q5BJF6 829 aa13.77□□□□□ -0.2
COL5A2-201ENST00000374866 DIAPH3Q9NSV4 1193 aa13.77□□□□□ -0.2
COL5A2-201ENST00000374866 DDX49Q9Y6V7 483 aaKnown RBP13.77□□□□□ -0.21
COL5A2-201ENST00000374866 NUP155O75694 1391 aa13.76□□□□□ -0.21
COL5A2-201ENST00000374866 HOMER1Q86YM7 354 aa13.76□□□□□ -0.21
COL5A2-201ENST00000374866 RBM33Q96EV2 1170 aaKnown RBP13.76□□□□□ -0.21
COL5A2-201ENST00000374866 TIMELESSQ9UNS1 1208 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms