RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 SETD5Q9C0A6 1442 aa10.3□□□□□ -0.76
HSPG2-203ENST00000374695 BECN2A8MW95 431 aa10.3□□□□□ -0.76
HSPG2-203ENST00000374695 CREBRFQ8IUR6 639 aa10.3□□□□□ -0.76
HSPG2-203ENST00000374695 PDE3BQ13370 1112 aa10.3□□□□□ -0.76
HSPG2-203ENST00000374695 EIF4G1Q04637 1599 aaKnown RBP10.29□□□□□ -0.76
HSPG2-203ENST00000374695 KCNH8Q96L42 1107 aa10.29□□□□□ -0.76
HSPG2-203ENST00000374695 CCDC191Q8NCU4 936 aa10.29□□□□□ -0.76
HSPG2-203ENST00000374695 MFAP1P55081 439 aaKnown RBP10.29□□□□□ -0.76
HSPG2-203ENST00000374695 TAF7LQ5H9L4 462 aa10.29□□□□□ -0.76
HSPG2-203ENST00000374695 CCAR2Q8N163 923 aaKnown RBP10.29□□□□□ -0.76
HSPG2-203ENST00000374695 RDXP35241 583 aaKnown RBP10.28□□□□□ -0.76
HSPG2-203ENST00000374695 AKAP17AQ02040 695 aaKnown RBP10.28□□□□□ -0.76
HSPG2-203ENST00000374695 MYO6Q9UM54 1294 aa10.27□□□□□ -0.76
HSPG2-203ENST00000374695 MARCH6O60337 910 aa10.27□□□□□ -0.77
HSPG2-203ENST00000374695 GSE1Q14687 1217 aa10.27□□□□□ -0.77
HSPG2-203ENST00000374695 PES1O00541 588 aaKnown RBP10.27□□□□□ -0.77
HSPG2-203ENST00000374695 APBB1O00213 710 aa10.27□□□□□ -0.77
HSPG2-203ENST00000374695 PDE4CQ08493 712 aa10.27□□□□□ -0.77
HSPG2-203ENST00000374695 CCDC47Q96A33 483 aaKnown RBP10.27□□□□□ -0.77
HSPG2-203ENST00000374695 UBE2Q2Q8WVN8 375 aa10.27□□□□□ -0.77
HSPG2-203ENST00000374695 CCDC66A2RUB6 948 aa10.26□□□□□ -0.77
HSPG2-203ENST00000374695 DCAF11Q8TEB1 546 aa10.26□□□□□ -0.77
HSPG2-203ENST00000374695 PATL2C9JE40 543 aaKnown RBP10.26□□□□□ -0.77
HSPG2-203ENST00000374695 FAM184AQ8NB25 1140 aa10.25□□□□□ -0.77
HSPG2-203ENST00000374695 SENP3Q9H4L4 574 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-203ENST00000374695 ROCK1Q13464 1354 aa10.25□□□□□ -0.77
HSPG2-203ENST00000374695 HSP90B2PQ58FF3 399 aa10.25□□□□□ -0.77
HSPG2-203ENST00000374695 TCEAL9Q9UHQ7 104 aa10.25□□□□□ -0.77
HSPG2-203ENST00000374695 CENPJQ9HC77 1338 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-203ENST00000374695 VPS53Q5VIR6 699 aa10.25□□□□□ -0.77
HSPG2-203ENST00000374695 SMC4Q9NTJ3 1288 aa10.24□□□□□ -0.77
HSPG2-203ENST00000374695 ERCC4Q92889 916 aaPredicted RBP10.24□□□□□ -0.77
HSPG2-203ENST00000374695 CHMP3Q9Y3E7 222 aa10.24□□□□□ -0.77
HSPG2-203ENST00000374695 SENP3-EIF4A1A0A087X0R7 540 aa10.24□□□□□ -0.77
HSPG2-203ENST00000374695 APPP05067 770 aa10.23□□□□□ -0.77
HSPG2-203ENST00000374695 CENPQQ7L2Z9 268 aaPredicted RBP10.23□□□□□ -0.77
HSPG2-203ENST00000374695 MYO15BQ96JP2 1530 aa10.23□□□□□ -0.77
HSPG2-203ENST00000374695 U2AF1L5P0DN76 240 aaPredicted RBP10.23□□□□□ -0.77
HSPG2-203ENST00000374695 U2AF1Q01081 240 aaKnown RBP eCLIP10.23□□□□□ -0.77
HSPG2-203ENST00000374695 CPLX2Q6PUV4 134 aaKnown RBP10.23□□□□□ -0.77
HSPG2-203ENST00000374695 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.23□□□□□ -0.77
HSPG2-203ENST00000374695 TSPYL1Q9H0U9 437 aa10.23□□□□□ -0.77
HSPG2-203ENST00000374695 ERCC6Q03468 1493 aa10.22□□□□□ -0.77
HSPG2-203ENST00000374695 SYNE3Q6ZMZ3 975 aa10.22□□□□□ -0.77
HSPG2-203ENST00000374695 REC8O95072 547 aa10.22□□□□□ -0.77
HSPG2-203ENST00000374695 RUFY2Q8WXA3 655 aa10.22□□□□□ -0.77
HSPG2-203ENST00000374695 CCP110O43303 1012 aa10.22□□□□□ -0.77
HSPG2-203ENST00000374695 AMOTL1Q8IY63 956 aa10.21□□□□□ -0.77
HSPG2-203ENST00000374695 KIF15Q9NS87 1388 aa10.21□□□□□ -0.77
HSPG2-203ENST00000374695 DDX49Q9Y6V7 483 aaKnown RBP10.21□□□□□ -0.77
HSPG2-203ENST00000374695 ZRSR2Q15696 482 aaKnown RBP10.21□□□□□ -0.77
HSPG2-203ENST00000374695 HOMER1Q86YM7 354 aa10.21□□□□□ -0.77
HSPG2-203ENST00000374695 ANO8Q9HCE9 1232 aaPredicted RBP10.21□□□□□ -0.77
HSPG2-203ENST00000374695 PRDM2Q13029 1718 aa10.21□□□□□ -0.78
HSPG2-203ENST00000374695 NAT10Q9H0A0 1025 aaKnown RBP10.21□□□□□ -0.78
HSPG2-203ENST00000374695 G3V3G9 751 aa10.21□□□□□ -0.78
HSPG2-203ENST00000374695 DCAF8Q5TAQ9 597 aa10.21□□□□□ -0.78
HSPG2-203ENST00000374695 TRIM29Q14134 588 aa10.2□□□□□ -0.78
HSPG2-203ENST00000374695 ZNF592Q92610 1267 aa10.2□□□□□ -0.78
HSPG2-203ENST00000374695 TERF2IPQ9NYB0 399 aa10.2□□□□□ -0.78
HSPG2-203ENST00000374695 CCDC173Q0VFZ6 552 aa10.2□□□□□ -0.78
HSPG2-203ENST00000374695 DIAPH3Q9NSV4 1193 aa10.2□□□□□ -0.78
HSPG2-203ENST00000374695 FAM43AQ8N2R8 423 aa10.2□□□□□ -0.78
HSPG2-203ENST00000374695 PCMTD1Q96MG8 357 aaPredicted RBP10.2□□□□□ -0.78
HSPG2-203ENST00000374695 DHX8Q14562 1220 aaKnown RBP10.2□□□□□ -0.78
HSPG2-203ENST00000374695 CGNL1Q0VF96 1302 aa10.2□□□□□ -0.78
HSPG2-203ENST00000374695 MNS1Q8NEH6 495 aa10.2□□□□□ -0.78
HSPG2-203ENST00000374695 FAM161AQ3B820 660 aa10.19□□□□□ -0.78
HSPG2-203ENST00000374695 HMGN5P82970 282 aaKnown RBP10.19□□□□□ -0.78
HSPG2-203ENST00000374695 UACAQ9BZF9 1416 aa10.19□□□□□ -0.78
HSPG2-203ENST00000374695 ZKSCAN1P17029 563 aaPredicted RBP10.19□□□□□ -0.78
HSPG2-203ENST00000374695 FMN1Q68DA7 1419 aa10.19□□□□□ -0.78
HSPG2-203ENST00000374695 NLRP13Q86W25 1043 aa10.19□□□□□ -0.78
HSPG2-203ENST00000374695 NOL10Q9BSC4 688 aaKnown RBP10.18□□□□□ -0.78
HSPG2-203ENST00000374695 KRI1Q8N9T8 703 aaKnown RBP10.18□□□□□ -0.78
HSPG2-203ENST00000374695 H0YHG0 523 aa10.18□□□□□ -0.78
HSPG2-203ENST00000374695 RNF20Q5VTR2 975 aa10.18□□□□□ -0.78
HSPG2-203ENST00000374695 VPS8Q8N3P4 1428 aa10.18□□□□□ -0.78
HSPG2-203ENST00000374695 HMGB1P09429 215 aaKnown RBP10.18□□□□□ -0.78
HSPG2-203ENST00000374695 ODF2Q5BJF6 829 aa10.18□□□□□ -0.78
HSPG2-203ENST00000374695 EPS15P42566 896 aa10.17□□□□□ -0.78
HSPG2-203ENST00000374695 MCTP1Q6DN14 999 aa10.17□□□□□ -0.78
HSPG2-203ENST00000374695 KIF7Q2M1P5 1343 aa10.17□□□□□ -0.78
HSPG2-203ENST00000374695 TOMM22Q9NS69 142 aa10.17□□□□□ -0.78
HSPG2-203ENST00000374695 NUCB2P80303 420 aa10.17□□□□□ -0.78
HSPG2-203ENST00000374695 CT47A1Q5JQC4 288 aaPredicted RBP10.17□□□□□ -0.78
HSPG2-203ENST00000374695 CAGE1Q8TC20 777 aa10.17□□□□□ -0.78
HSPG2-203ENST00000374695 SIN3AQ96ST3 1273 aa10.16□□□□□ -0.78
HSPG2-203ENST00000374695 CCDC39Q9UFE4 941 aa10.16□□□□□ -0.78
HSPG2-203ENST00000374695 FRAT2O75474 233 aaPredicted RBP10.16□□□□□ -0.78
HSPG2-203ENST00000374695 NEXNQ0ZGT2 675 aa10.16□□□□□ -0.78
HSPG2-203ENST00000374695 INCENPQ9NQS7 918 aa10.16□□□□□ -0.78
HSPG2-203ENST00000374695 ANKRD30AQ9BXX3 1397 aa10.16□□□□□ -0.78
HSPG2-203ENST00000374695 FAM13BQ9NYF5 915 aa10.16□□□□□ -0.78
HSPG2-203ENST00000374695 TRIM34Q9BYJ4 488 aa10.15□□□□□ -0.78
HSPG2-203ENST00000374695 HSPA5P11021 654 aaKnown RBP10.15□□□□□ -0.78
HSPG2-203ENST00000374695 CCDC43Q96MW1 224 aaKnown RBP10.15□□□□□ -0.78
HSPG2-203ENST00000374695 CSB-PGBD3P0DP91 1061 aa10.15□□□□□ -0.78
HSPG2-203ENST00000374695 AAMPQ13685 434 aa10.15□□□□□ -0.79
HSPG2-203ENST00000374695 GOLGA6L7A0A1B0GV03 622 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms