RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 ROCK2O75116 1388 aaKnown RBP21.22■□□□□ 0.99
TMEM50A-201ENST00000374358 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.2■□□□□ 0.989e-19■□□□□ 9.5
TMEM50A-201ENST00000374358 NBPF1Q3BBV0 1214 aa21.2■□□□□ 0.98
TMEM50A-201ENST00000374358 PPP4R2Q9NY27 417 aa21.2■□□□□ 0.98
TMEM50A-201ENST00000374358 CCDC144AA2RUR9 1427 aa21.18■□□□□ 0.98
TMEM50A-201ENST00000374358 TMC1Q8TDI8 760 aa21.17■□□□□ 0.98
TMEM50A-201ENST00000374358 ARID4BQ4LE39 1312 aaPredicted RBP21.17■□□□□ 0.98
TMEM50A-201ENST00000374358 PLA2R1Q13018 1463 aa21.16■□□□□ 0.98
TMEM50A-201ENST00000374358 PNISRQ8TF01 805 aaKnown RBP21.16■□□□□ 0.98
TMEM50A-201ENST00000374358 PLEKHH2Q8IVE3 1493 aa21.16■□□□□ 0.98
TMEM50A-201ENST00000374358 PRAG1Q86YV5 1406 aa21.14■□□□□ 0.97
TMEM50A-201ENST00000374358 MSH5O43196 834 aa21.12■□□□□ 0.97
TMEM50A-201ENST00000374358 SMG6Q86US8 1419 aaKnown RBP21.11■□□□□ 0.97
TMEM50A-201ENST00000374358 SHROOM2Q13796 1616 aa21.11■□□□□ 0.97
TMEM50A-201ENST00000374358 TRPM1Q7Z4N2 1603 aa21.11■□□□□ 0.97
TMEM50A-201ENST00000374358 RSPH4AQ5TD94 716 aa21.11■□□□□ 0.97
TMEM50A-201ENST00000374358 A2MP01023 1474 aa21.11■□□□□ 0.97
TMEM50A-201ENST00000374358 NUDCQ9Y266 331 aa21.11■□□□□ 0.97
TMEM50A-201ENST00000374358 ERICH6BQ5W0A0 696 aa21.1■□□□□ 0.97
TMEM50A-201ENST00000374358 MYO5CQ9NQX4 1742 aa21.1■□□□□ 0.97
TMEM50A-201ENST00000374358 ABCC2Q92887 1545 aa21.1■□□□□ 0.97
TMEM50A-201ENST00000374358 UNC13BO14795 1591 aa21.09■□□□□ 0.97
TMEM50A-201ENST00000374358 SALL2Q9Y467 1007 aaPredicted RBP21.09■□□□□ 0.97
TMEM50A-201ENST00000374358 E9PCH4 1651 aa21.08■□□□□ 0.97
TMEM50A-201ENST00000374358 MAST1Q9Y2H9 1570 aa21.06■□□□□ 0.96
TMEM50A-201ENST00000374358 MYBBP1AQ9BQG0 1328 aaKnown RBP21.06■□□□□ 0.96
TMEM50A-201ENST00000374358 DISP3Q9P2K9 1392 aa21.04■□□□□ 0.96
TMEM50A-201ENST00000374358 PLXNC1O60486 1568 aa21.03■□□□□ 0.96
TMEM50A-201ENST00000374358 IQGAP3Q86VI3 1631 aa21.03■□□□□ 0.96
TMEM50A-201ENST00000374358 LRPPRCP42704 1394 aaKnown RBP21.02■□□□□ 0.96
TMEM50A-201ENST00000374358 CC2D1BQ5T0F9 858 aaKnown RBP21.01■□□□□ 0.95
TMEM50A-201ENST00000374358 TRAPPC8Q9Y2L5 1435 aa21.01■□□□□ 0.95
TMEM50A-201ENST00000374358 BRD4O60885 1362 aaPredicted RBP21.01■□□□□ 0.95
TMEM50A-201ENST00000374358 RALBP1Q15311 655 aa21.01■□□□□ 0.95
TMEM50A-201ENST00000374358 ZCCHC11Q5TAX3 1644 aaKnown RBP21■□□□□ 0.95
TMEM50A-201ENST00000374358 TESK2Q96S53 571 aa21■□□□□ 0.95
TMEM50A-201ENST00000374358 DUOX2Q9NRD8 1548 aa20.98■□□□□ 0.95
TMEM50A-201ENST00000374358 PER1O15534 1290 aaPredicted RBP20.98■□□□□ 0.95
TMEM50A-201ENST00000374358 PLCH2O75038 1416 aa20.98■□□□□ 0.95
TMEM50A-201ENST00000374358 GPRASP1Q5JY77 1395 aa20.98■□□□□ 0.95
TMEM50A-201ENST00000374358 AFAP1Q8N556 730 aa20.97■□□□□ 0.95
TMEM50A-201ENST00000374358 KTN1Q86UP2 1357 aaKnown RBP20.97■□□□□ 0.95
TMEM50A-201ENST00000374358 RNF123Q5XPI4 1314 aa20.97■□□□□ 0.95
TMEM50A-201ENST00000374358 COL17A1Q9UMD9 1497 aaPredicted RBP20.97■□□□□ 0.95
TMEM50A-201ENST00000374358 PARD3Q8TEW0 1356 aa20.96■□□□□ 0.95
TMEM50A-201ENST00000374358 PRDM15P57071 1507 aaPredicted RBP20.96■□□□□ 0.95
TMEM50A-201ENST00000374358 EFCAB2Q5VUJ9 269 aa20.96■□□□□ 0.95
TMEM50A-201ENST00000374358 FANCIQ9NVI1 1328 aa20.95■□□□□ 0.94
TMEM50A-201ENST00000374358 NLRP13Q86W25 1043 aa20.95■□□□□ 0.94
TMEM50A-201ENST00000374358 PANK3Q9H999 370 aa20.94■□□□□ 0.94
TMEM50A-201ENST00000374358 MAGI2Q86UL8 1455 aa20.94■□□□□ 0.94
TMEM50A-201ENST00000374358 ABCC1P33527 1531 aa20.94■□□□□ 0.94
TMEM50A-201ENST00000374358 ERBINQ96RT1 1412 aa20.94■□□□□ 0.94
TMEM50A-201ENST00000374358 CCDC136Q96JN2 1154 aa20.94■□□□□ 0.94
TMEM50A-201ENST00000374358 SPAG9O60271 1321 aaKnown RBP20.9■□□□□ 0.94
TMEM50A-201ENST00000374358 CDCA7LQ96GN5 454 aa20.89■□□□□ 0.93
TMEM50A-201ENST00000374358 ATP10AO60312 1499 aa20.88■□□□□ 0.93
TMEM50A-201ENST00000374358 EIF2AK4Q9P2K8 1649 aaKnown RBP20.88■□□□□ 0.93
TMEM50A-201ENST00000374358 CLASP1Q7Z460 1538 aa20.88■□□□□ 0.93
TMEM50A-201ENST00000374358 TMF1P82094 1093 aa20.87■□□□□ 0.93
TMEM50A-201ENST00000374358 LAMC1P11047 1609 aa20.87■□□□□ 0.93
TMEM50A-201ENST00000374358 RRP1P56182 461 aaKnown RBP20.84■□□□□ 0.93
TMEM50A-201ENST00000374358 RNF17Q9BXT8 1623 aaKnown RBP20.84■□□□□ 0.93
TMEM50A-201ENST00000374358 ZFYVE16Q7Z3T8 1539 aa20.84■□□□□ 0.93
TMEM50A-201ENST00000374358 MYT1LQ9UL68 1186 aa20.83■□□□□ 0.93
TMEM50A-201ENST00000374358 EXOC6Q8TAG9 804 aa20.83■□□□□ 0.92
TMEM50A-201ENST00000374358 RCAN3Q9UKA8 241 aa20.83■□□□□ 0.92
TMEM50A-201ENST00000374358 MADDQ8WXG6 1647 aa20.82■□□□□ 0.92
TMEM50A-201ENST00000374358 UHRF1BP1LA0JNW5 1464 aa20.82■□□□□ 0.92
TMEM50A-201ENST00000374358 ERICH6Q7L0X2 663 aa20.81■□□□□ 0.92
TMEM50A-201ENST00000374358 CLTCL1P53675 1640 aa20.8■□□□□ 0.92
TMEM50A-201ENST00000374358 PLIN1O60240 522 aa20.78■□□□□ 0.92
TMEM50A-201ENST00000374358 WDR7Q9Y4E6 1490 aa20.78■□□□□ 0.92
TMEM50A-201ENST00000374358 TRPM2O94759 1503 aa20.77■□□□□ 0.92
TMEM50A-201ENST00000374358 KIF3BO15066 747 aa20.77■□□□□ 0.92
TMEM50A-201ENST00000374358 SPHKAPQ2M3C7 1700 aa20.77■□□□□ 0.92
TMEM50A-201ENST00000374358 UGGT1Q9NYU2 1555 aa20.76■□□□□ 0.91
TMEM50A-201ENST00000374358 IQGAP1P46940 1657 aa20.75■□□□□ 0.91
TMEM50A-201ENST00000374358 FANCAO15360 1455 aa20.75■□□□□ 0.91
TMEM50A-201ENST00000374358 SCAPERQ9BY12 1400 aa20.75■□□□□ 0.91
TMEM50A-201ENST00000374358 ADAMTS8Q9UP79 889 aa20.75■□□□□ 0.91
TMEM50A-201ENST00000374358 CEP152O94986 1710 aa20.75■□□□□ 0.91
TMEM50A-201ENST00000374358 WASHC2CQ9Y4E1 1318 aa20.74■□□□□ 0.91
TMEM50A-201ENST00000374358 BLMP54132 1417 aaPredicted RBP20.74■□□□□ 0.91
TMEM50A-201ENST00000374358 ATP7AQ04656 1500 aa20.73■□□□□ 0.91
TMEM50A-201ENST00000374358 RTEL1-TNFRSF6BF6WH68 1400 aa20.73■□□□□ 0.91
TMEM50A-201ENST00000374358 KNSTRNQ9Y448 316 aa20.72■□□□□ 0.91
TMEM50A-201ENST00000374358 PTPRTO14522 1441 aa20.72■□□□□ 0.91
TMEM50A-201ENST00000374358 DEPDC5O75140 1603 aa20.71■□□□□ 0.91
TMEM50A-201ENST00000374358 PPP2R1AP30153 589 aa20.71■□□□□ 0.91
TMEM50A-201ENST00000374358 PDE3BQ13370 1112 aa20.71■□□□□ 0.91
TMEM50A-201ENST00000374358 AMER1Q5JTC6 1135 aaPredicted RBP20.7■□□□□ 0.9
TMEM50A-201ENST00000374358 SCAF11Q99590 1463 aaKnown RBP20.7■□□□□ 0.9
TMEM50A-201ENST00000374358 INO80Q9ULG1 1556 aaPredicted RBP20.69■□□□□ 0.9
TMEM50A-201ENST00000374358 TET3O43151 1660 aa20.69■□□□□ 0.9
TMEM50A-201ENST00000374358 ADGRL1O94910 1474 aa20.69■□□□□ 0.9
TMEM50A-201ENST00000374358 PAK3O75914 559 aaPredicted RBP20.69■□□□□ 0.9
TMEM50A-201ENST00000374358 CFAP70Q5T0N1 1121 aa20.69■□□□□ 0.9
TMEM50A-201ENST00000374358 SKAP1Q86WV1 359 aa20.69■□□□□ 0.9
TMEM50A-201ENST00000374358 ABCA9Q8IUA7 1624 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms