RNA–Protein interactions for RNA: ENST00000373201.5

PTPRT-207, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-207ENST00000373201 SLKQ9H2G2 1235 aaPredicted RBP11.28□□□□□ -0.6
PTPRT-207ENST00000373201 NUTM2DQ5VT03 806 aaPredicted RBP11.28□□□□□ -0.6
PTPRT-207ENST00000373201 R3HCC1Q9Y3T6 440 aaKnown RBP11.28□□□□□ -0.6
PTPRT-207ENST00000373201 ODF2Q5BJF6 829 aa11.27□□□□□ -0.6
PTPRT-207ENST00000373201 TMEM132AQ24JP5 1023 aa11.27□□□□□ -0.61
PTPRT-207ENST00000373201 MCTP1Q6DN14 999 aa11.27□□□□□ -0.61
PTPRT-207ENST00000373201 CT47A1Q5JQC4 288 aaPredicted RBP11.26□□□□□ -0.61
PTPRT-207ENST00000373201 PPP4R2Q9NY27 417 aa11.26□□□□□ -0.61
PTPRT-207ENST00000373201 TPM1P09493 284 aa11.26□□□□□ -0.61
PTPRT-207ENST00000373201 MFAP1P55081 439 aaKnown RBP11.26□□□□□ -0.61
PTPRT-207ENST00000373201 CHMP4AQ9BY43 222 aa11.25□□□□□ -0.61
PTPRT-207ENST00000373201 CCNB3Q8WWL7 1395 aa11.25□□□□□ -0.61
PTPRT-207ENST00000373201 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTPRT-207ENST00000373201 SYNE3Q6ZMZ3 975 aa11.25□□□□□ -0.61
PTPRT-207ENST00000373201 HMMRO75330 724 aa11.25□□□□□ -0.61
PTPRT-207ENST00000373201 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTPRT-207ENST00000373201 CCDC70Q6NSX1 233 aa11.25□□□□□ -0.61
PTPRT-207ENST00000373201 APPP05067 770 aa11.25□□□□□ -0.61
PTPRT-207ENST00000373201 HDAC5Q9UQL6 1122 aa11.25□□□□□ -0.61
PTPRT-207ENST00000373201 CALRP27797 417 aaKnown RBP11.24□□□□□ -0.61
PTPRT-207ENST00000373201 FAM184AQ8NB25 1140 aa11.24□□□□□ -0.61
PTPRT-207ENST00000373201 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.24□□□□□ -0.61
PTPRT-207ENST00000373201 FOXD4L6Q3SYB3 417 aaPredicted RBP11.24□□□□□ -0.61
PTPRT-207ENST00000373201 FOXD4L3Q6VB84 417 aaPredicted RBP11.24□□□□□ -0.61
PTPRT-207ENST00000373201 C1orf141Q5JVX7 400 aa11.24□□□□□ -0.61
PTPRT-207ENST00000373201 PTMSP20962 102 aa11.24□□□□□ -0.61
PTPRT-207ENST00000373201 ZFYVE27Q5T4F4 411 aa11.23□□□□□ -0.61
PTPRT-207ENST00000373201 RBM33Q96EV2 1170 aaKnown RBP11.23□□□□□ -0.61
PTPRT-207ENST00000373201 PHF14O94880 888 aa11.22□□□□□ -0.61
PTPRT-207ENST00000373201 NAP1L1P55209 391 aaKnown RBP11.22□□□□□ -0.61
PTPRT-207ENST00000373201 SMC4Q9NTJ3 1288 aa11.22□□□□□ -0.61
PTPRT-207ENST00000373201 WWC2Q6AWC2 1192 aa11.21□□□□□ -0.61
PTPRT-207ENST00000373201 RILPL2Q969X0 211 aa11.21□□□□□ -0.61
PTPRT-207ENST00000373201 KIF3AQ9Y496 699 aa11.21□□□□□ -0.61
PTPRT-207ENST00000373201 EPS15P42566 896 aa11.21□□□□□ -0.62
PTPRT-207ENST00000373201 FYB1O15117 783 aa11.21□□□□□ -0.62
PTPRT-207ENST00000373201 PPM1FP49593 454 aaPredicted RBP11.2□□□□□ -0.62
PTPRT-207ENST00000373201 GOLGA6L19H0YKK7 550 aa11.2□□□□□ -0.62
PTPRT-207ENST00000373201 RWDD1Q9H446 243 aaPredicted RBP11.19□□□□□ -0.62
PTPRT-207ENST00000373201 SLC4A3P48751 1232 aa11.19□□□□□ -0.62
PTPRT-207ENST00000373201 TRIM29Q14134 588 aa11.19□□□□□ -0.62
PTPRT-207ENST00000373201 ROCK2O75116 1388 aaKnown RBP11.19□□□□□ -0.62
PTPRT-207ENST00000373201 IKQ13123 557 aaPredicted RBP11.19□□□□□ -0.62
PTPRT-207ENST00000373201 NFXL1Q6ZNB6 911 aa11.19□□□□□ -0.62
PTPRT-207ENST00000373201 MTMR7Q9Y216 660 aa11.18□□□□□ -0.62
PTPRT-207ENST00000373201 TTC5Q8N0Z6 440 aa11.18□□□□□ -0.62
PTPRT-207ENST00000373201 IPO7O95373 1038 aaKnown RBP11.18□□□□□ -0.62
PTPRT-207ENST00000373201 KTN1Q86UP2 1357 aaKnown RBP11.18□□□□□ -0.62
PTPRT-207ENST00000373201 CCDC47Q96A33 483 aaKnown RBP11.18□□□□□ -0.62
PTPRT-207ENST00000373201 ST18O60284 1047 aa11.17□□□□□ -0.62
PTPRT-207ENST00000373201 FOSBP53539 338 aa11.17□□□□□ -0.62
PTPRT-207ENST00000373201 HSP90AB2PQ58FF8 381 aa11.17□□□□□ -0.62
PTPRT-207ENST00000373201 SIN3AQ96ST3 1273 aa11.17□□□□□ -0.62
PTPRT-207ENST00000373201 CCDC146Q8IYE0 955 aa11.16□□□□□ -0.62
PTPRT-207ENST00000373201 BECN2A8MW95 431 aa11.16□□□□□ -0.62
PTPRT-207ENST00000373201 ANKRD20A12PQ8NF67 263 aa11.16□□□□□ -0.62
PTPRT-207ENST00000373201 ZNF592Q92610 1267 aa11.16□□□□□ -0.62
PTPRT-207ENST00000373201 TERF2IPQ9NYB0 399 aa11.15□□□□□ -0.62
PTPRT-207ENST00000373201 CCDC27Q2M243 656 aa11.15□□□□□ -0.62
PTPRT-207ENST00000373201 CCDC97Q96F63 343 aaPredicted RBP11.15□□□□□ -0.62
PTPRT-207ENST00000373201 IBSPP21815 317 aaPredicted RBP11.14□□□□□ -0.63
PTPRT-207ENST00000373201 LRRFIP1Q32MZ4 808 aaKnown RBP11.14□□□□□ -0.63
PTPRT-207ENST00000373201 EIF3AQ14152 1382 aaKnown RBP11.14□□□□□ -0.63
PTPRT-207ENST00000373201 LMOD3Q0VAK6 560 aa11.14□□□□□ -0.63
PTPRT-207ENST00000373201 NECTIN2Q92692 538 aa11.14□□□□□ -0.63
PTPRT-207ENST00000373201 CLUAP1Q96AJ1 413 aa11.14□□□□□ -0.63
PTPRT-207ENST00000373201 CPLX1O14810 134 aa11.14□□□□□ -0.63
PTPRT-207ENST00000373201 EIF2S2P20042 333 aaKnown RBP11.14□□□□□ -0.63
PTPRT-207ENST00000373201 C9orf78Q9NZ63 289 aaPredicted RBP11.14□□□□□ -0.63
PTPRT-207ENST00000373201 SF3B2Q13435 895 aaKnown RBP11.13□□□□□ -0.63
PTPRT-207ENST00000373201 ERICH2A1L162 156 aa11.13□□□□□ -0.63
PTPRT-207ENST00000373201 FOXD1Q16676 465 aa11.13□□□□□ -0.63
PTPRT-207ENST00000373201 DEKP35659 375 aaKnown RBP11.13□□□□□ -0.63
PTPRT-207ENST00000373201 NEXNQ0ZGT2 675 aa11.12□□□□□ -0.63
PTPRT-207ENST00000373201 AK7Q96M32 723 aa11.12□□□□□ -0.63
PTPRT-207ENST00000373201 TCERG1O14776 1098 aaKnown RBP11.12□□□□□ -0.63
PTPRT-207ENST00000373201 CPLX2Q6PUV4 134 aaKnown RBP11.12□□□□□ -0.63
PTPRT-207ENST00000373201 TRDNQ13061 729 aa11.12□□□□□ -0.63
PTPRT-207ENST00000373201 GPS2Q13227 327 aa11.12□□□□□ -0.63
PTPRT-207ENST00000373201 DIAPH3Q9NSV4 1193 aa11.12□□□□□ -0.63
PTPRT-207ENST00000373201 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
PTPRT-207ENST00000373201 WDR70Q9NW82 654 aa11.11□□□□□ -0.63
PTPRT-207ENST00000373201 RUFY1Q96T51 708 aa11.11□□□□□ -0.63
PTPRT-207ENST00000373201 GOLGA6L3A6NEY3 463 aa11.11□□□□□ -0.63
PTPRT-207ENST00000373201 HOOK1Q9UJC3 728 aaKnown RBP11.11□□□□□ -0.63
PTPRT-207ENST00000373201 TEFQ10587 303 aa11.11□□□□□ -0.63
PTPRT-207ENST00000373201 RDXP35241 583 aaKnown RBP11.1□□□□□ -0.63
PTPRT-207ENST00000373201 PSME1Q06323 249 aa11.1□□□□□ -0.63
PTPRT-207ENST00000373201 ANO2Q9NQ90 1003 aa11.1□□□□□ -0.63
PTPRT-207ENST00000373201 RCAN3Q9UKA8 241 aa11.1□□□□□ -0.63
PTPRT-207ENST00000373201 WASHC2CQ9Y4E1 1318 aa11.09□□□□□ -0.63
PTPRT-207ENST00000373201 KDM4AO75164 1064 aa11.09□□□□□ -0.63
PTPRT-207ENST00000373201 GOLGA3Q08378 1498 aa11.09□□□□□ -0.63
PTPRT-207ENST00000373201 OFD1O75665 1012 aa11.09□□□□□ -0.63
PTPRT-207ENST00000373201 HOMER1Q86YM7 354 aa11.09□□□□□ -0.63
PTPRT-207ENST00000373201 KIF27Q86VH2 1401 aa11.08□□□□□ -0.64
PTPRT-207ENST00000373201 PLIN1O60240 522 aa11.08□□□□□ -0.64
PTPRT-207ENST00000373201 SKIDA1Q1XH10 827 aa11.08□□□□□ -0.64
PTPRT-207ENST00000373201 BCL11BQ9C0K0 894 aaPredicted RBP11.07□□□□□ -0.64
PTPRT-207ENST00000373201 RRP7AQ9Y3A4 280 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms