RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 TIAM1Q13009 1591 aa13.3□□□□□ -0.28
NUP188-201ENST00000372577 PANK3Q9H999 370 aa13.3□□□□□ -0.28
NUP188-201ENST00000372577 EVC2Q86UK5 1308 aa13.3□□□□□ -0.28
NUP188-201ENST00000372577 HDAC5Q9UQL6 1122 aa13.29□□□□□ -0.28
NUP188-201ENST00000372577 CENPJQ9HC77 1338 aaPredicted RBP13.29□□□□□ -0.28
NUP188-201ENST00000372577 CGNL1Q0VF96 1302 aa13.28□□□□□ -0.28
NUP188-201ENST00000372577 PTMSP20962 102 aa13.28□□□□□ -0.28
NUP188-201ENST00000372577 PLEKHH2Q8IVE3 1493 aa13.28□□□□□ -0.28
NUP188-201ENST00000372577 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
NUP188-201ENST00000372577 CCDC7Q96M83 1385 aa13.27□□□□□ -0.29
NUP188-201ENST00000372577 BICRAQ9NZM4 1560 aa13.27□□□□□ -0.29
NUP188-201ENST00000372577 TRAK1Q9UPV9 953 aa13.26□□□□□ -0.29
NUP188-201ENST00000372577 ITPRIPQ8IWB1 547 aa13.26□□□□□ -0.29
NUP188-201ENST00000372577 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
NUP188-201ENST00000372577 KCNJ4P48050 445 aa13.26□□□□□ -0.29
NUP188-201ENST00000372577 CNTLNQ9NXG0 1405 aa13.26□□□□□ -0.29
NUP188-201ENST00000372577 SOX12O15370 315 aa13.25□□□□□ -0.29
NUP188-201ENST00000372577 LAMC3Q9Y6N6 1575 aa13.25□□□□□ -0.29
NUP188-201ENST00000372577 SMC4Q9NTJ3 1288 aa13.25□□□□□ -0.29
NUP188-201ENST00000372577 STK31Q9BXU1 1019 aa13.25□□□□□ -0.29
NUP188-201ENST00000372577 E9PSI1 815 aa13.24□□□□□ -0.29
NUP188-201ENST00000372577 HFM1A2PYH4 1435 aa13.24□□□□□ -0.29
NUP188-201ENST00000372577 NESP48681 1621 aa13.24□□□□□ -0.29
NUP188-201ENST00000372577 PTMAP06454 111 aaKnown RBP13.24□□□□□ -0.29
NUP188-201ENST00000372577 CUL7Q14999 1698 aa13.24□□□□□ -0.29
NUP188-201ENST00000372577 TROQ12816 1431 aaPredicted RBP13.24□□□□□ -0.29
NUP188-201ENST00000372577 SUPT6HQ7KZ85 1726 aaKnown RBP13.24□□□□□ -0.29
NUP188-201ENST00000372577 ARHGAP5Q13017 1502 aa13.24□□□□□ -0.29
NUP188-201ENST00000372577 ZNF644Q9H582 1327 aaPredicted RBP13.23□□□□□ -0.29
NUP188-201ENST00000372577 HMMRO75330 724 aa13.23□□□□□ -0.29
NUP188-201ENST00000372577 L1TD1Q5T7N2 865 aaKnown RBP13.23□□□□□ -0.29
NUP188-201ENST00000372577 FGD1P98174 961 aa13.23□□□□□ -0.29
NUP188-201ENST00000372577 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
NUP188-201ENST00000372577 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
NUP188-201ENST00000372577 PRG4Q92954 1404 aaPredicted RBP13.21□□□□□ -0.29
NUP188-201ENST00000372577 CCDC146Q8IYE0 955 aa13.21□□□□□ -0.3
NUP188-201ENST00000372577 NGDNQ8NEJ9 315 aaKnown RBP13.21□□□□□ -0.3
NUP188-201ENST00000372577 CDK11BP21127 795 aaKnown RBP13.2□□□□□ -0.3
NUP188-201ENST00000372577 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.2□□□□□ -0.3
NUP188-201ENST00000372577 CENPQQ7L2Z9 268 aaPredicted RBP13.2□□□□□ -0.3
NUP188-201ENST00000372577 KIF7Q2M1P5 1343 aa13.2□□□□□ -0.3
NUP188-201ENST00000372577 TSHZ2Q9NRE2 1034 aa13.19□□□□□ -0.3
NUP188-201ENST00000372577 KIAA0586Q9BVV6 1533 aa13.19□□□□□ -0.3
NUP188-201ENST00000372577 KIAA1211Q6ZU35 1233 aa13.19□□□□□ -0.3
NUP188-201ENST00000372577 KIAA1107Q9UPP5 1409 aa13.18□□□□□ -0.3
NUP188-201ENST00000372577 RRP1P56182 461 aaKnown RBP13.18□□□□□ -0.3
NUP188-201ENST00000372577 GBP4Q96PP9 640 aa13.18□□□□□ -0.3
NUP188-201ENST00000372577 SNAPC4Q5SXM2 1469 aa13.18□□□□□ -0.3
NUP188-201ENST00000372577 GOLGA6L6A8MZA4 724 aa13.18□□□□□ -0.3
NUP188-201ENST00000372577 C9orf84Q5VXU9 1444 aa13.18□□□□□ -0.3
NUP188-201ENST00000372577 COG3Q96JB2 828 aa13.18□□□□□ -0.3
NUP188-201ENST00000372577 BRD4O60885 1362 aaPredicted RBP13.17□□□□□ -0.3
NUP188-201ENST00000372577 AMPHP49418 695 aa13.17□□□□□ -0.3
NUP188-201ENST00000372577 IPO9Q96P70 1041 aaKnown RBP13.17□□□□□ -0.3
NUP188-201ENST00000372577 WASHC2AQ641Q2 1341 aa13.17□□□□□ -0.3
NUP188-201ENST00000372577 NUTM2DQ5VT03 806 aaPredicted RBP13.17□□□□□ -0.3
NUP188-201ENST00000372577 ROCK1Q13464 1354 aa13.16□□□□□ -0.3
NUP188-201ENST00000372577 GPATCH3Q96I76 525 aa13.16□□□□□ -0.3
NUP188-201ENST00000372577 CSB-PGBD3P0DP91 1061 aa13.16□□□□□ -0.3
NUP188-201ENST00000372577 GOLGA6L4A6NEF3 574 aa13.15□□□□□ -0.3
NUP188-201ENST00000372577 IQGAP2Q13576 1575 aa13.15□□□□□ -0.3
NUP188-201ENST00000372577 NPHP1O15259 732 aa13.15□□□□□ -0.3
NUP188-201ENST00000372577 NRDCO43847 1150 aa13.15□□□□□ -0.31
NUP188-201ENST00000372577 AAMPQ13685 434 aa13.15□□□□□ -0.31
NUP188-201ENST00000372577 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.15□□□□□ -0.31
NUP188-201ENST00000372577 DAPK1P53355 1430 aa13.14□□□□□ -0.31
NUP188-201ENST00000372577 BIVM-ERCC5R4GMW8 1640 aa13.14□□□□□ -0.31
NUP188-201ENST00000372577 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
NUP188-201ENST00000372577 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
NUP188-201ENST00000372577 EPRSP07814 1512 aaKnown RBP13.13□□□□□ -0.31
NUP188-201ENST00000372577 DIAPH1O60610 1272 aaKnown RBP13.11□□□□□ -0.31
NUP188-201ENST00000372577 DNTTIP2Q5QJE6 756 aaKnown RBP13.11□□□□□ -0.31
NUP188-201ENST00000372577 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
NUP188-201ENST00000372577 RUNDC1Q96C34 613 aa13.11□□□□□ -0.31
NUP188-201ENST00000372577 PCF11O94913 1555 aaKnown RBP13.1□□□□□ -0.31
NUP188-201ENST00000372577 HTATSF1O43719 755 aaKnown RBP13.1□□□□□ -0.31
NUP188-201ENST00000372577 CLUAP1Q96AJ1 413 aa13.1□□□□□ -0.31
NUP188-201ENST00000372577 MINK1Q8N4C8 1332 aaPredicted RBP13.1□□□□□ -0.31
NUP188-201ENST00000372577 FAM161AQ3B820 660 aa13.1□□□□□ -0.31
NUP188-201ENST00000372577 APBB1O00213 710 aa13.09□□□□□ -0.31
NUP188-201ENST00000372577 APAF1O14727 1248 aa13.09□□□□□ -0.31
NUP188-201ENST00000372577 NAP1L2Q9ULW6 460 aaPredicted RBP13.09□□□□□ -0.31
NUP188-201ENST00000372577 DDX19BQ9UMR2 479 aa13.08□□□□□ -0.32
NUP188-201ENST00000372577 DEKP35659 375 aaKnown RBP13.08□□□□□ -0.32
NUP188-201ENST00000372577 MFAP1P55081 439 aaKnown RBP13.08□□□□□ -0.32
NUP188-201ENST00000372577 SYAP1Q96A49 352 aaPredicted RBP13.08□□□□□ -0.32
NUP188-201ENST00000372577 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
NUP188-201ENST00000372577 MAGI1Q96QZ7 1491 aaPredicted RBP13.07□□□□□ -0.32
NUP188-201ENST00000372577 FAM69CQ0P6D2 419 aa13.07□□□□□ -0.32
NUP188-201ENST00000372577 USP35Q9P2H5 1018 aa13.07□□□□□ -0.32
NUP188-201ENST00000372577 NAIPQ13075 1403 aa13.07□□□□□ -0.32
NUP188-201ENST00000372577 EXOC6Q8TAG9 804 aa13.06□□□□□ -0.32
NUP188-201ENST00000372577 CRBNQ96SW2 442 aa13.06□□□□□ -0.32
NUP188-201ENST00000372577 API5Q9BZZ5 524 aaKnown RBP13.06□□□□□ -0.32
NUP188-201ENST00000372577 SLC4A10Q6U841 1118 aa13.06□□□□□ -0.32
NUP188-201ENST00000372577 PDE4AP27815 886 aa13.05□□□□□ -0.32
NUP188-201ENST00000372577 KIF16BQ96L93 1317 aa13.05□□□□□ -0.32
NUP188-201ENST00000372577 CSPP1Q1MSJ5 1256 aa13.05□□□□□ -0.32
NUP188-201ENST00000372577 AFAP1Q8N556 730 aa13.05□□□□□ -0.32
NUP188-201ENST00000372577 ST18O60284 1047 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms