RNA–Protein interactions for RNA: ENST00000372097.9

GTF3C5-202, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-202ENST00000372097 ANKRD50Q9ULJ7 1429 aa25.69■■□□□ 1.7
GTF3C5-202ENST00000372097 KTN1Q86UP2 1357 aaKnown RBP25.69■■□□□ 1.7
GTF3C5-202ENST00000372097 MYBBP1AQ9BQG0 1328 aaKnown RBP25.69■■□□□ 1.7
GTF3C5-202ENST00000372097 TCERG1O14776 1098 aaKnown RBP25.69■■□□□ 1.7
GTF3C5-202ENST00000372097 EXOC6Q8TAG9 804 aa25.68■■□□□ 1.7
GTF3C5-202ENST00000372097 RALBP1Q15311 655 aa25.67■■□□□ 1.7
GTF3C5-202ENST00000372097 HNRNPMP52272 730 aaKnown RBP eCLIP25.67■■□□□ 1.7
GTF3C5-202ENST00000372097 CARD11Q9BXL7 1154 aa25.67■■□□□ 1.7
GTF3C5-202ENST00000372097 C9orf84Q5VXU9 1444 aa25.66■■□□□ 1.7
GTF3C5-202ENST00000372097 CHD1O14646 1710 aa25.66■■□□□ 1.7
GTF3C5-202ENST00000372097 TSPY4P0CV99 314 aa25.66■■□□□ 1.7
GTF3C5-202ENST00000372097 TSPY10P0CW01 314 aa25.66■■□□□ 1.7
GTF3C5-202ENST00000372097 RCAN3Q9UKA8 241 aa25.64■■□□□ 1.7
GTF3C5-202ENST00000372097 PDE4AP27815 886 aa25.63■■□□□ 1.69
GTF3C5-202ENST00000372097 ST20-MTHFSA0A0A6YYL1 179 aa25.62■■□□□ 1.69
GTF3C5-202ENST00000372097 NUP155O75694 1391 aa25.61■■□□□ 1.69
GTF3C5-202ENST00000372097 ARHGEF12Q9NZN5 1544 aa25.61■■□□□ 1.69
GTF3C5-202ENST00000372097 SHANK2Q9UPX8 1470 aa25.6■■□□□ 1.69
GTF3C5-202ENST00000372097 NPM2Q86SE8 214 aaKnown RBP25.6■■□□□ 1.69
GTF3C5-202ENST00000372097 BACH2Q9BYV9 841 aa25.6■■□□□ 1.69
GTF3C5-202ENST00000372097 MS4A1P11836 297 aa25.59■■□□□ 1.69
GTF3C5-202ENST00000372097 PDE3BQ13370 1112 aa25.58■■□□□ 1.69
GTF3C5-202ENST00000372097 E9PCH4 1651 aa25.55■■□□□ 1.68
GTF3C5-202ENST00000372097 USP35Q9P2H5 1018 aa25.55■■□□□ 1.68
GTF3C5-202ENST00000372097 NLRP13Q86W25 1043 aa25.54■■□□□ 1.68
GTF3C5-202ENST00000372097 CDC42BPBQ9Y5S2 1711 aa25.53■■□□□ 1.68
GTF3C5-202ENST00000372097 PARD3Q8TEW0 1356 aa25.52■■□□□ 1.68
GTF3C5-202ENST00000372097 SAMD9LQ8IVG5 1584 aa25.52■■□□□ 1.68
GTF3C5-202ENST00000372097 KDM2AQ9Y2K7 1162 aa25.51■■□□□ 1.67
GTF3C5-202ENST00000372097 SALL2Q9Y467 1007 aaPredicted RBP25.51■■□□□ 1.67
GTF3C5-202ENST00000372097 ERCC6L2Q5T890 1561 aa25.51■■□□□ 1.67
GTF3C5-202ENST00000372097 ARHGEF5Q12774 1597 aa25.5■■□□□ 1.67
GTF3C5-202ENST00000372097 NEFMP07197 916 aa25.49■■□□□ 1.67
GTF3C5-202ENST00000372097 LAS1LQ9Y4W2 734 aaKnown RBP25.49■■□□□ 1.67
GTF3C5-202ENST00000372097 SHROOM2Q13796 1616 aa25.49■■□□□ 1.67
GTF3C5-202ENST00000372097 PREX2Q70Z35 1606 aa25.49■■□□□ 1.67
GTF3C5-202ENST00000372097 DCAF11Q8TEB1 546 aa25.48■■□□□ 1.67
GTF3C5-202ENST00000372097 CCDC141Q6ZP82 1450 aa25.48■■□□□ 1.67
GTF3C5-202ENST00000372097 CDCA7LQ96GN5 454 aa25.47■■□□□ 1.67
GTF3C5-202ENST00000372097 KDM5DQ9BY66 1539 aa25.46■■□□□ 1.67
GTF3C5-202ENST00000372097 IL27Q8NEV9 243 aa25.45■■□□□ 1.67
GTF3C5-202ENST00000372097 TTC37Q6PGP7 1564 aa25.44■■□□□ 1.66
GTF3C5-202ENST00000372097 PPM1GO15355 546 aaPredicted RBP25.44■■□□□ 1.66
GTF3C5-202ENST00000372097 PER1O15534 1290 aaPredicted RBP25.44■■□□□ 1.66
GTF3C5-202ENST00000372097 ARHGAP5Q13017 1502 aa25.43■■□□□ 1.66
GTF3C5-202ENST00000372097 RSPH4AQ5TD94 716 aa25.42■■□□□ 1.66
GTF3C5-202ENST00000372097 SYCP2Q9BX26 1530 aa25.42■■□□□ 1.66
GTF3C5-202ENST00000372097 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.42■■□□□ 1.665e-6■■■■□ 19.7
GTF3C5-202ENST00000372097 INSRP06213 1382 aa25.41■■□□□ 1.66
GTF3C5-202ENST00000372097 WASHC2CQ9Y4E1 1318 aa25.4■■□□□ 1.66
GTF3C5-202ENST00000372097 ABCC2Q92887 1545 aa25.4■■□□□ 1.66
GTF3C5-202ENST00000372097 PLIN1O60240 522 aa25.39■■□□□ 1.66
GTF3C5-202ENST00000372097 ANO8Q9HCE9 1232 aaPredicted RBP25.37■■□□□ 1.65
GTF3C5-202ENST00000372097 BLMP54132 1417 aaPredicted RBP25.37■■□□□ 1.65
GTF3C5-202ENST00000372097 ZMYM4Q5VZL5 1548 aa25.37■■□□□ 1.65
GTF3C5-202ENST00000372097 CRBNQ96SW2 442 aa25.36■■□□□ 1.65
GTF3C5-202ENST00000372097 DDRGK1Q96HY6 314 aa25.35■■□□□ 1.65
GTF3C5-202ENST00000372097 FAM135AQ9P2D6 1515 aa25.35■■□□□ 1.65
GTF3C5-202ENST00000372097 PRAG1Q86YV5 1406 aa25.35■■□□□ 1.65
GTF3C5-202ENST00000372097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.34■■□□□ 1.655e-8■■■□□ 19
GTF3C5-202ENST00000372097 SKAP1Q86WV1 359 aa25.34■■□□□ 1.65
GTF3C5-202ENST00000372097 TRPM1Q7Z4N2 1603 aa25.32■■□□□ 1.64
GTF3C5-202ENST00000372097 MYO5CQ9NQX4 1742 aa25.31■■□□□ 1.64
GTF3C5-202ENST00000372097 NBPF1Q3BBV0 1214 aa25.29■■□□□ 1.64
GTF3C5-202ENST00000372097 GPRASP1Q5JY77 1395 aa25.29■■□□□ 1.64
GTF3C5-202ENST00000372097 CC2D1BQ5T0F9 858 aaKnown RBP25.28■■□□□ 1.64
GTF3C5-202ENST00000372097 COL17A1Q9UMD9 1497 aaPredicted RBP25.28■■□□□ 1.64
GTF3C5-202ENST00000372097 PLEKHH2Q8IVE3 1493 aa25.28■■□□□ 1.64
GTF3C5-202ENST00000372097 KDM2BQ8NHM5 1336 aa25.27■■□□□ 1.64
GTF3C5-202ENST00000372097 MAST1Q9Y2H9 1570 aa25.27■■□□□ 1.64
GTF3C5-202ENST00000372097 PRKCSHP14314 528 aaPredicted RBP25.26■■□□□ 1.63
GTF3C5-202ENST00000372097 TESK2Q96S53 571 aa25.26■■□□□ 1.63
GTF3C5-202ENST00000372097 RTN4Q9NQC3 1192 aaKnown RBP25.26■■□□□ 1.63
GTF3C5-202ENST00000372097 C20orf194Q5TEA3 1177 aa25.25■■□□□ 1.63
GTF3C5-202ENST00000372097 DISP3Q9P2K9 1392 aa25.25■■□□□ 1.63
GTF3C5-202ENST00000372097 RGL3Q3MIN7 710 aa25.25■■□□□ 1.63
GTF3C5-202ENST00000372097 ZCCHC11Q5TAX3 1644 aaKnown RBP25.25■■□□□ 1.63
GTF3C5-202ENST00000372097 CLASP1Q7Z460 1538 aa25.24■■□□□ 1.63
GTF3C5-202ENST00000372097 CCDC144AA2RUR9 1427 aa25.24■■□□□ 1.63
GTF3C5-202ENST00000372097 PANK3Q9H999 370 aa25.24■■□□□ 1.63
GTF3C5-202ENST00000372097 GSE1Q14687 1217 aa25.22■■□□□ 1.63
GTF3C5-202ENST00000372097 PLCH2O75038 1416 aa25.22■■□□□ 1.63
GTF3C5-202ENST00000372097 NFKBIBQ15653 356 aa25.21■■□□□ 1.63
GTF3C5-202ENST00000372097 UNC13BO14795 1591 aa25.21■■□□□ 1.63
GTF3C5-202ENST00000372097 EFCAB2Q5VUJ9 269 aa25.21■■□□□ 1.63
GTF3C5-202ENST00000372097 PRDM15P57071 1507 aaPredicted RBP25.2■■□□□ 1.62
GTF3C5-202ENST00000372097 CENPQQ7L2Z9 268 aaPredicted RBP25.2■■□□□ 1.62
GTF3C5-202ENST00000372097 PLXNC1O60486 1568 aa25.19■■□□□ 1.62
GTF3C5-202ENST00000372097 PLA2R1Q13018 1463 aa25.19■■□□□ 1.62
GTF3C5-202ENST00000372097 LAMC1P11047 1609 aa25.18■■□□□ 1.62
GTF3C5-202ENST00000372097 A2MP01023 1474 aa25.18■■□□□ 1.62
GTF3C5-202ENST00000372097 ERBINQ96RT1 1412 aa25.18■■□□□ 1.62
GTF3C5-202ENST00000372097 ADAMTS8Q9UP79 889 aa25.17■■□□□ 1.62
GTF3C5-202ENST00000372097 UHRF1BP1LA0JNW5 1464 aa25.16■■□□□ 1.62
GTF3C5-202ENST00000372097 SLC4A3P48751 1232 aa25.16■■□□□ 1.62
GTF3C5-202ENST00000372097 DUOX2Q9NRD8 1548 aa25.15■■□□□ 1.62
GTF3C5-202ENST00000372097 DUSP27Q5VZP5 1158 aa25.14■■□□□ 1.62
GTF3C5-202ENST00000372097 TMF1P82094 1093 aa25.14■■□□□ 1.61
GTF3C5-202ENST00000372097 FAM161AQ3B820 660 aa25.14■■□□□ 1.61
GTF3C5-202ENST00000372097 C8orf34Q49A92 452 aa25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms