RNA–Protein interactions for RNA: ENST00000371039.5

SGIP1-204, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGIP1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-204ENST00000371039 EXOC6Q8TAG9 804 aa6.52□□□□□ -1.37
SGIP1-204ENST00000371039 RAPGEF6Q8TEU7 1601 aa6.52□□□□□ -1.37
SGIP1-204ENST00000371039 GPATCH8Q9UKJ3 1502 aaKnown RBP6.52□□□□□ -1.37
SGIP1-204ENST00000371039 PER1O15534 1290 aaPredicted RBP6.51□□□□□ -1.37
SGIP1-204ENST00000371039 ARHGEF12Q9NZN5 1544 aa6.51□□□□□ -1.37
SGIP1-204ENST00000371039 PTPRGP23470 1445 aa6.51□□□□□ -1.37
SGIP1-204ENST00000371039 PLA2R1Q13018 1463 aa6.51□□□□□ -1.37
SGIP1-204ENST00000371039 BACH2Q9BYV9 841 aa6.5□□□□□ -1.37
SGIP1-204ENST00000371039 PRG4Q92954 1404 aaPredicted RBP6.5□□□□□ -1.37
SGIP1-204ENST00000371039 KIAA1107Q9UPP5 1409 aa6.5□□□□□ -1.37
SGIP1-204ENST00000371039 PARD3Q8TEW0 1356 aa6.5□□□□□ -1.37
SGIP1-204ENST00000371039 CDCA7LQ96GN5 454 aa6.5□□□□□ -1.37
SGIP1-204ENST00000371039 ABCC10Q5T3U5 1492 aa6.5□□□□□ -1.37
SGIP1-204ENST00000371039 SAMD1Q6SPF0 538 aaPredicted RBP6.5□□□□□ -1.37
SGIP1-204ENST00000371039 CCDC136Q96JN2 1154 aa6.5□□□□□ -1.37
SGIP1-204ENST00000371039 BLMP54132 1417 aaPredicted RBP6.5□□□□□ -1.37
SGIP1-204ENST00000371039 MYOM1P52179 1685 aa6.49□□□□□ -1.37
SGIP1-204ENST00000371039 KDM2BQ8NHM5 1336 aa6.49□□□□□ -1.37
SGIP1-204ENST00000371039 C20orf194Q5TEA3 1177 aa6.49□□□□□ -1.37
SGIP1-204ENST00000371039 BRD2P25440 801 aaKnown RBP6.49□□□□□ -1.37
SGIP1-204ENST00000371039 RRP1P56182 461 aaKnown RBP6.49□□□□□ -1.37
SGIP1-204ENST00000371039 NLRP1Q9C000 1473 aa6.48□□□□□ -1.37
SGIP1-204ENST00000371039 RNF17Q9BXT8 1623 aaKnown RBP6.48□□□□□ -1.37
SGIP1-204ENST00000371039 PRDM15P57071 1507 aaPredicted RBP6.48□□□□□ -1.37
SGIP1-204ENST00000371039 FBXO3Q9UK99 471 aa6.48□□□□□ -1.37
SGIP1-204ENST00000371039 ITSN2Q9NZM3 1697 aa6.48□□□□□ -1.37
SGIP1-204ENST00000371039 CDC42BPBQ9Y5S2 1711 aa6.48□□□□□ -1.37
SGIP1-204ENST00000371039 EIF4G3O43432 1585 aaKnown RBP6.47□□□□□ -1.37
SGIP1-204ENST00000371039 ABCA8O94911 1581 aa6.47□□□□□ -1.37
SGIP1-204ENST00000371039 LAMC1P11047 1609 aa6.47□□□□□ -1.37
SGIP1-204ENST00000371039 ARID3CA6NKF2 412 aa6.47□□□□□ -1.37
SGIP1-204ENST00000371039 PDE4AP27815 886 aa6.47□□□□□ -1.37
SGIP1-204ENST00000371039 PLB1Q6P1J6 1458 aa6.47□□□□□ -1.37
SGIP1-204ENST00000371039 BRPF3Q9ULD4 1205 aa6.46□□□□□ -1.37
SGIP1-204ENST00000371039 USP19O94966 1318 aa6.46□□□□□ -1.37
SGIP1-204ENST00000371039 PLIN1O60240 522 aa6.46□□□□□ -1.38
SGIP1-204ENST00000371039 ZMYM4Q5VZL5 1548 aa6.46□□□□□ -1.38
SGIP1-204ENST00000371039 DCAF11Q8TEB1 546 aa6.45□□□□□ -1.38
SGIP1-204ENST00000371039 BRD4O60885 1362 aaPredicted RBP6.45□□□□□ -1.38
SGIP1-204ENST00000371039 DISP3Q9P2K9 1392 aa6.45□□□□□ -1.38
SGIP1-204ENST00000371039 MAGI2Q86UL8 1455 aa6.45□□□□□ -1.38
SGIP1-204ENST00000371039 ZNF521Q96K83 1311 aa6.45□□□□□ -1.38
SGIP1-204ENST00000371039 TESK2Q96S53 571 aa6.45□□□□□ -1.38
SGIP1-204ENST00000371039 MYT1LQ9UL68 1186 aa6.45□□□□□ -1.38
SGIP1-204ENST00000371039 COL17A1Q9UMD9 1497 aaPredicted RBP6.45□□□□□ -1.38
SGIP1-204ENST00000371039 PRAG1Q86YV5 1406 aa6.45□□□□□ -1.38
SGIP1-204ENST00000371039 PLEKHH1Q9ULM0 1364 aa6.45□□□□□ -1.38
SGIP1-204ENST00000371039 ST20-MTHFSA0A0A6YYL1 179 aa6.45□□□□□ -1.38
SGIP1-204ENST00000371039 CNGB1Q14028 1251 aaPredicted RBP6.45□□□□□ -1.38
SGIP1-204ENST00000371039 C8orf34Q49A92 452 aa6.45□□□□□ -1.38
SGIP1-204ENST00000371039 LAS1LQ9Y4W2 734 aaKnown RBP6.45□□□□□ -1.38
SGIP1-204ENST00000371039 A2MP01023 1474 aa6.44□□□□□ -1.38
SGIP1-204ENST00000371039 SLC4A1APQ9BWU0 796 aaKnown RBP6.44□□□□□ -1.38
SGIP1-204ENST00000371039 SAMD9LQ8IVG5 1584 aa6.44□□□□□ -1.38
SGIP1-204ENST00000371039 IQGAP1P46940 1657 aa6.44□□□□□ -1.38
SGIP1-204ENST00000371039 A0A0U1RQG5 324 aaPredicted RBP6.44□□□□□ -1.38
SGIP1-204ENST00000371039 ARID4BQ4LE39 1312 aaPredicted RBP6.44□□□□□ -1.38
SGIP1-204ENST00000371039 WDR7Q9Y4E6 1490 aa6.44□□□□□ -1.38
SGIP1-204ENST00000371039 TROQ12816 1431 aaPredicted RBP6.43□□□□□ -1.38
SGIP1-204ENST00000371039 AAMPQ13685 434 aa6.43□□□□□ -1.38
SGIP1-204ENST00000371039 GPRASP1Q5JY77 1395 aa6.43□□□□□ -1.38
SGIP1-204ENST00000371039 UNC13BO14795 1591 aa6.43□□□□□ -1.38
SGIP1-204ENST00000371039 SLC4A3P48751 1232 aa6.43□□□□□ -1.38
SGIP1-204ENST00000371039 KIF15Q9NS87 1388 aa6.43□□□□□ -1.38
SGIP1-204ENST00000371039 SHANK2Q9UPX8 1470 aa6.43□□□□□ -1.38
SGIP1-204ENST00000371039 MYBBP1AQ9BQG0 1328 aaKnown RBP6.42□□□□□ -1.38
SGIP1-204ENST00000371039 PKD2Q13563 968 aa6.42□□□□□ -1.38
SGIP1-204ENST00000371039 NBPF1Q3BBV0 1214 aa6.42□□□□□ -1.38
SGIP1-204ENST00000371039 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.42□□□□□ -1.38
SGIP1-204ENST00000371039 FAM135AQ9P2D6 1515 aa6.42□□□□□ -1.38
SGIP1-204ENST00000371039 SYNJ2O15056 1496 aa6.42□□□□□ -1.38
SGIP1-204ENST00000371039 FBLN2P98095 1184 aa6.42□□□□□ -1.38
SGIP1-204ENST00000371039 SPINK5Q9NQ38 1064 aaPredicted RBP6.42□□□□□ -1.38
SGIP1-204ENST00000371039 ANKRD50Q9ULJ7 1429 aa6.42□□□□□ -1.38
SGIP1-204ENST00000371039 RCAN3Q9UKA8 241 aa6.42□□□□□ -1.38
SGIP1-204ENST00000371039 CRBNQ96SW2 442 aa6.41□□□□□ -1.38
SGIP1-204ENST00000371039 CLASP1Q7Z460 1538 aa6.41□□□□□ -1.38
SGIP1-204ENST00000371039 SHPRHQ149N8 1683 aa6.41□□□□□ -1.38
SGIP1-204ENST00000371039 CNKSR2Q8WXI2 1034 aa6.41□□□□□ -1.38
SGIP1-204ENST00000371039 ZBTB47Q9UFB7 747 aaPredicted RBP6.41□□□□□ -1.38
SGIP1-204ENST00000371039 ARHGEF5Q12774 1597 aa6.41□□□□□ -1.38
SGIP1-204ENST00000371039 TRHP20396 242 aaPredicted RBP6.41□□□□□ -1.38
SGIP1-204ENST00000371039 GRIN2AQ12879 1464 aa6.41□□□□□ -1.38
SGIP1-204ENST00000371039 IFT140Q96RY7 1462 aa6.41□□□□□ -1.38
SGIP1-204ENST00000371039 DMRT2Q9Y5R5 561 aa6.4□□□□□ -1.38
SGIP1-204ENST00000371039 INSRP06213 1382 aa6.4□□□□□ -1.38
SGIP1-204ENST00000371039 TCERG1O14776 1098 aaKnown RBP6.4□□□□□ -1.38
SGIP1-204ENST00000371039 MADDQ8WXG6 1647 aa6.4□□□□□ -1.38
SGIP1-204ENST00000371039 FRAT1Q92837 279 aaPredicted RBP6.4□□□□□ -1.39
SGIP1-204ENST00000371039 IQGAP3Q86VI3 1631 aa6.4□□□□□ -1.39
SGIP1-204ENST00000371039 NEFMP07197 916 aa6.4□□□□□ -1.39
SGIP1-204ENST00000371039 MS4A1P11836 297 aa6.4□□□□□ -1.39
SGIP1-204ENST00000371039 NFKBIBQ15653 356 aa6.4□□□□□ -1.39
SGIP1-204ENST00000371039 TRMT2AQ8IZ69 625 aaKnown RBP6.39□□□□□ -1.39
SGIP1-204ENST00000371039 CEP152O94986 1710 aa6.39□□□□□ -1.39
SGIP1-204ENST00000371039 C9orf84Q5VXU9 1444 aa6.39□□□□□ -1.39
SGIP1-204ENST00000371039 PREX2Q70Z35 1606 aa6.39□□□□□ -1.39
SGIP1-204ENST00000371039 SEC24BO95487 1268 aa6.39□□□□□ -1.39
SGIP1-204ENST00000371039 DUSP27Q5VZP5 1158 aa6.39□□□□□ -1.39
SGIP1-204ENST00000371039 ATP10BO94823 1461 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms