RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
TGFBR3-202ENST00000370399 CTTNBP2Q8WZ74 1663 aa9.42□□□□□ -0.9
TGFBR3-202ENST00000370399 MAPKBP1O60336 1514 aa9.42□□□□□ -0.9
TGFBR3-202ENST00000370399 DISP1Q96F81 1524 aa9.42□□□□□ -0.9
TGFBR3-202ENST00000370399 RALBP1Q15311 655 aa9.41□□□□□ -0.9
TGFBR3-202ENST00000370399 CFAP53Q96M91 514 aa9.41□□□□□ -0.9
TGFBR3-202ENST00000370399 AKNAQ7Z591 1439 aa9.41□□□□□ -0.9
TGFBR3-202ENST00000370399 WDR62O43379 1518 aa9.41□□□□□ -0.9
TGFBR3-202ENST00000370399 UGGT2Q9NYU1 1516 aa9.41□□□□□ -0.9
TGFBR3-202ENST00000370399 NLRP13Q86W25 1043 aa9.41□□□□□ -0.9
TGFBR3-202ENST00000370399 TARBP1Q13395 1621 aaKnown RBP9.4□□□□□ -0.9
TGFBR3-202ENST00000370399 CCDC146Q8IYE0 955 aa9.4□□□□□ -0.91
TGFBR3-202ENST00000370399 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.38□□□□□ -0.91
TGFBR3-202ENST00000370399 KIAA0556O60303 1618 aa9.38□□□□□ -0.91
TGFBR3-202ENST00000370399 RAPGEF6Q8TEU7 1601 aa9.38□□□□□ -0.91
TGFBR3-202ENST00000370399 LAS1LQ9Y4W2 734 aaKnown RBP9.38□□□□□ -0.91
TGFBR3-202ENST00000370399 FRAT1Q92837 279 aaPredicted RBP9.38□□□□□ -0.91
TGFBR3-202ENST00000370399 PPP4R2Q9NY27 417 aa9.38□□□□□ -0.91
TGFBR3-202ENST00000370399 CCDC141Q6ZP82 1450 aa9.37□□□□□ -0.91
TGFBR3-202ENST00000370399 MAGI3Q5TCQ9 1506 aa9.37□□□□□ -0.91
TGFBR3-202ENST00000370399 VGFO15240 615 aaPredicted RBP9.36□□□□□ -0.91
TGFBR3-202ENST00000370399 MINK1Q8N4C8 1332 aaPredicted RBP9.36□□□□□ -0.91
TGFBR3-202ENST00000370399 PLEKHH2Q8IVE3 1493 aa9.36□□□□□ -0.91
TGFBR3-202ENST00000370399 LMOD2Q6P5Q4 547 aa9.36□□□□□ -0.91
TGFBR3-202ENST00000370399 NUP160Q12769 1436 aa9.36□□□□□ -0.91
TGFBR3-202ENST00000370399 MYBBP1AQ9BQG0 1328 aaKnown RBP9.36□□□□□ -0.91
TGFBR3-202ENST00000370399 CNTLNQ9NXG0 1405 aa9.36□□□□□ -0.91
TGFBR3-202ENST00000370399 U2AF1L5P0DN76 240 aaPredicted RBP9.35□□□□□ -0.91
TGFBR3-202ENST00000370399 ANP32AP39687 249 aaKnown RBP9.35□□□□□ -0.91
TGFBR3-202ENST00000370399 U2AF1Q01081 240 aaKnown RBP eCLIP9.35□□□□□ -0.91
TGFBR3-202ENST00000370399 KIF14Q15058 1648 aa9.35□□□□□ -0.91
TGFBR3-202ENST00000370399 EIF3AQ14152 1382 aaKnown RBP9.34□□□□□ -0.91
TGFBR3-202ENST00000370399 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.34□□□□□ -0.912e-8■■□□□ 11.6
TGFBR3-202ENST00000370399 NUDCQ9Y266 331 aa9.34□□□□□ -0.91
TGFBR3-202ENST00000370399 ZBTB47Q9UFB7 747 aaPredicted RBP9.34□□□□□ -0.91
TGFBR3-202ENST00000370399 PBRM1Q86U86 1689 aa9.34□□□□□ -0.91
TGFBR3-202ENST00000370399 MAPK8IP3Q9UPT6 1336 aa9.34□□□□□ -0.91
TGFBR3-202ENST00000370399 RRP7AQ9Y3A4 280 aaKnown RBP9.34□□□□□ -0.91
TGFBR3-202ENST00000370399 RCAN3Q9UKA8 241 aa9.33□□□□□ -0.92
TGFBR3-202ENST00000370399 CFAP43Q8NDM7 1665 aa9.33□□□□□ -0.92
TGFBR3-202ENST00000370399 HDGFP51858 240 aaKnown RBP9.33□□□□□ -0.92
TGFBR3-202ENST00000370399 SAMD9Q5K651 1589 aa9.33□□□□□ -0.92
TGFBR3-202ENST00000370399 CD109Q6YHK3 1445 aa9.32□□□□□ -0.92
TGFBR3-202ENST00000370399 CEP170Q5SW79 1584 aa9.32□□□□□ -0.92
TGFBR3-202ENST00000370399 RPRD2Q5VT52 1461 aaKnown RBP9.32□□□□□ -0.92
TGFBR3-202ENST00000370399 RTL5Q5HYW3 569 aaPredicted RBP9.32□□□□□ -0.92
TGFBR3-202ENST00000370399 HDGFL2Q7Z4V5 671 aaPredicted RBP9.32□□□□□ -0.92
TGFBR3-202ENST00000370399 CENPJQ9HC77 1338 aaPredicted RBP9.31□□□□□ -0.92
TGFBR3-202ENST00000370399 PLIN1O60240 522 aa9.31□□□□□ -0.92
TGFBR3-202ENST00000370399 CABP2Q9NPB3 220 aa9.31□□□□□ -0.92
TGFBR3-202ENST00000370399 RGS3P49796 1198 aa9.3□□□□□ -0.92
TGFBR3-202ENST00000370399 SLC12A5Q9H2X9 1139 aa9.3□□□□□ -0.92
TGFBR3-202ENST00000370399 ZBED9Q6R2W3 1325 aa9.3□□□□□ -0.92
TGFBR3-202ENST00000370399 APAF1O14727 1248 aa9.3□□□□□ -0.92
TGFBR3-202ENST00000370399 ADGRL1O94910 1474 aa9.3□□□□□ -0.92
TGFBR3-202ENST00000370399 TRAPPC8Q9Y2L5 1435 aa9.29□□□□□ -0.92
TGFBR3-202ENST00000370399 TCOF1Q13428 1488 aaKnown RBP9.29□□□□□ -0.92
TGFBR3-202ENST00000370399 FANCAO15360 1455 aa9.29□□□□□ -0.92
TGFBR3-202ENST00000370399 TERF2IPQ9NYB0 399 aa9.29□□□□□ -0.92
TGFBR3-202ENST00000370399 ADAMTS8Q9UP79 889 aa9.28□□□□□ -0.92
TGFBR3-202ENST00000370399 EVC2Q86UK5 1308 aa9.28□□□□□ -0.92
TGFBR3-202ENST00000370399 SYCP2Q9BX26 1530 aa9.28□□□□□ -0.92
TGFBR3-202ENST00000370399 PAK3O75914 559 aaPredicted RBP9.28□□□□□ -0.92
TGFBR3-202ENST00000370399 ADGRF5Q8IZF2 1346 aa9.28□□□□□ -0.92
TGFBR3-202ENST00000370399 PLCH2O75038 1416 aa9.28□□□□□ -0.92
TGFBR3-202ENST00000370399 GOLGA2Q08379 1002 aa9.27□□□□□ -0.92
TGFBR3-202ENST00000370399 FBXO31Q5XUX0 539 aaPredicted RBP9.27□□□□□ -0.92
TGFBR3-202ENST00000370399 CDCA7LQ96GN5 454 aa9.27□□□□□ -0.92
TGFBR3-202ENST00000370399 FTSJ3Q8IY81 847 aaKnown RBP9.27□□□□□ -0.93
TGFBR3-202ENST00000370399 GGNBP2Q9H3C7 697 aa9.27□□□□□ -0.93
TGFBR3-202ENST00000370399 TSHZ2Q9NRE2 1034 aa9.27□□□□□ -0.93
TGFBR3-202ENST00000370399 ASXL2Q76L83 1435 aa9.27□□□□□ -0.93
TGFBR3-202ENST00000370399 RBM19Q9Y4C8 960 aaKnown RBP9.26□□□□□ -0.93
TGFBR3-202ENST00000370399 NBR1Q14596 966 aa9.26□□□□□ -0.93
TGFBR3-202ENST00000370399 PNISRQ8TF01 805 aaKnown RBP9.26□□□□□ -0.93
TGFBR3-202ENST00000370399 CLUAP1Q96AJ1 413 aa9.26□□□□□ -0.93
TGFBR3-202ENST00000370399 EID1Q9Y6B2 187 aa9.26□□□□□ -0.93
TGFBR3-202ENST00000370399 BCL2L13Q9BXK5 485 aa9.26□□□□□ -0.93
TGFBR3-202ENST00000370399 ERBINQ96RT1 1412 aa9.26□□□□□ -0.93
TGFBR3-202ENST00000370399 STAC3Q96MF2 364 aa9.26□□□□□ -0.93
TGFBR3-202ENST00000370399 IDI1Q13907 227 aa9.25□□□□□ -0.93
TGFBR3-202ENST00000370399 PRAM1Q96QH2 718 aa9.25□□□□□ -0.93
TGFBR3-202ENST00000370399 CGNL1Q0VF96 1302 aa9.24□□□□□ -0.93
TGFBR3-202ENST00000370399 NGDNQ8NEJ9 315 aaKnown RBP9.24□□□□□ -0.93
TGFBR3-202ENST00000370399 EXOC6Q8TAG9 804 aa9.24□□□□□ -0.93
TGFBR3-202ENST00000370399 PPP2R1AP30153 589 aa9.23□□□□□ -0.93
TGFBR3-202ENST00000370399 MTHFSP49914 203 aa9.23□□□□□ -0.93
TGFBR3-202ENST00000370399 TXNDC2Q86VQ3 553 aa9.23□□□□□ -0.93
TGFBR3-202ENST00000370399 PZPP20742 1482 aa9.22□□□□□ -0.93
TGFBR3-202ENST00000370399 DHX29Q7Z478 1369 aaKnown RBP9.22□□□□□ -0.93
TGFBR3-202ENST00000370399 ELL2O00472 640 aaPredicted RBP9.22□□□□□ -0.93
TGFBR3-202ENST00000370399 PDE3BQ13370 1112 aa9.22□□□□□ -0.93
TGFBR3-202ENST00000370399 SLC52A1Q9NWF4 448 aa9.22□□□□□ -0.93
TGFBR3-202ENST00000370399 A0A0G2JS52 829 aa9.21□□□□□ -0.93
TGFBR3-202ENST00000370399 SLC26A8Q96RN1 970 aa9.21□□□□□ -0.93
TGFBR3-202ENST00000370399 LTV1Q96GA3 475 aaPredicted RBP9.21□□□□□ -0.93
TGFBR3-202ENST00000370399 KDM6BO15054 1643 aa9.2□□□□□ -0.94
TGFBR3-202ENST00000370399 WDR7Q9Y4E6 1490 aa9.2□□□□□ -0.94
TGFBR3-202ENST00000370399 BRD4O60885 1362 aaPredicted RBP9.2□□□□□ -0.94
TGFBR3-202ENST00000370399 CEBPAP49715 358 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms