RNA–Protein interactions for RNA: ENST00000370128.8

RTCA-203, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCA, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-203ENST00000370128 ARHGEF12Q9NZN5 1544 aa23.62■■□□□ 1.37
RTCA-203ENST00000370128 RALGAPBQ86X10 1494 aa23.61■■□□□ 1.37
RTCA-203ENST00000370128 FAM9BQ8IZU0 186 aa23.6■■□□□ 1.37
RTCA-203ENST00000370128 DHX29Q7Z478 1369 aaKnown RBP23.59■■□□□ 1.37
RTCA-203ENST00000370128 SHROOM2Q13796 1616 aa23.59■■□□□ 1.37
RTCA-203ENST00000370128 RSPH4AQ5TD94 716 aa23.58■■□□□ 1.36
RTCA-203ENST00000370128 ARID4BQ4LE39 1312 aaPredicted RBP23.57■■□□□ 1.36
RTCA-203ENST00000370128 NOP58Q9Y2X3 529 aaKnown RBP23.56■■□□□ 1.36
RTCA-203ENST00000370128 PODXL2Q9NZ53 605 aa23.55■■□□□ 1.36
RTCA-203ENST00000370128 FAM135AQ9P2D6 1515 aa23.54■■□□□ 1.36
RTCA-203ENST00000370128 TTC37Q6PGP7 1564 aa23.54■■□□□ 1.36
RTCA-203ENST00000370128 ZBED9Q6R2W3 1325 aa23.53■■□□□ 1.36
RTCA-203ENST00000370128 SYCP2Q9BX26 1530 aa23.53■■□□□ 1.36
RTCA-203ENST00000370128 CARD11Q9BXL7 1154 aa23.53■■□□□ 1.36
RTCA-203ENST00000370128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.52■■□□□ 1.361e-9■■■□□ 16.2
RTCA-203ENST00000370128 POLR3GLQ9BT43 218 aa23.51■■□□□ 1.35
RTCA-203ENST00000370128 ARHGAP5Q13017 1502 aa23.51■■□□□ 1.35
RTCA-203ENST00000370128 KDM2AQ9Y2K7 1162 aa23.5■■□□□ 1.35
RTCA-203ENST00000370128 ERCC6L2Q5T890 1561 aa23.5■■□□□ 1.35
RTCA-203ENST00000370128 MAST1Q9Y2H9 1570 aa23.5■■□□□ 1.35
RTCA-203ENST00000370128 DCAF11Q8TEB1 546 aa23.5■■□□□ 1.35
RTCA-203ENST00000370128 ABCC2Q92887 1545 aa23.49■■□□□ 1.35
RTCA-203ENST00000370128 IRX6P78412 446 aaPredicted RBP23.49■■□□□ 1.35
RTCA-203ENST00000370128 ROCK2O75116 1388 aaKnown RBP23.47■■□□□ 1.35
RTCA-203ENST00000370128 RTL5Q5HYW3 569 aaPredicted RBP23.47■■□□□ 1.35
RTCA-203ENST00000370128 UNC13BO14795 1591 aa23.45■■□□□ 1.34
RTCA-203ENST00000370128 ST20-MTHFSA0A0A6YYL1 179 aa23.44■■□□□ 1.34
RTCA-203ENST00000370128 MYO5CQ9NQX4 1742 aa23.43■■□□□ 1.34
RTCA-203ENST00000370128 CCDC144AA2RUR9 1427 aa23.43■■□□□ 1.34
RTCA-203ENST00000370128 CNGB1Q14028 1251 aaPredicted RBP23.41■■□□□ 1.34
RTCA-203ENST00000370128 PLXNC1O60486 1568 aa23.41■■□□□ 1.34
RTCA-203ENST00000370128 PLA2R1Q13018 1463 aa23.41■■□□□ 1.34
RTCA-203ENST00000370128 PLEKHH2Q8IVE3 1493 aa23.41■■□□□ 1.34
RTCA-203ENST00000370128 PAK3O75914 559 aaPredicted RBP23.4■■□□□ 1.34
RTCA-203ENST00000370128 PRAG1Q86YV5 1406 aa23.39■■□□□ 1.33
RTCA-203ENST00000370128 TRPM1Q7Z4N2 1603 aa23.37■■□□□ 1.33
RTCA-203ENST00000370128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.37■■□□□ 1.336e-7■■■□□ 18.1
RTCA-203ENST00000370128 IQGAP3Q86VI3 1631 aa23.37■■□□□ 1.33
RTCA-203ENST00000370128 PLCH2O75038 1416 aa23.34■■□□□ 1.33
RTCA-203ENST00000370128 DUOX2Q9NRD8 1548 aa23.34■■□□□ 1.33
RTCA-203ENST00000370128 RGL3Q3MIN7 710 aa23.33■■□□□ 1.33
RTCA-203ENST00000370128 E9PCH4 1651 aa23.33■■□□□ 1.32
RTCA-203ENST00000370128 A2MP01023 1474 aa23.33■■□□□ 1.32
RTCA-203ENST00000370128 ZCCHC11Q5TAX3 1644 aaKnown RBP23.32■■□□□ 1.32
RTCA-203ENST00000370128 PNISRQ8TF01 805 aaKnown RBP23.32■■□□□ 1.32
RTCA-203ENST00000370128 PPP4R2Q9NY27 417 aa23.32■■□□□ 1.32
RTCA-203ENST00000370128 MAGI2Q86UL8 1455 aa23.32■■□□□ 1.32
RTCA-203ENST00000370128 ERBINQ96RT1 1412 aa23.3■■□□□ 1.32
RTCA-203ENST00000370128 CLASP1Q7Z460 1538 aa23.3■■□□□ 1.32
RTCA-203ENST00000370128 SMG6Q86US8 1419 aaKnown RBP23.3■■□□□ 1.32
RTCA-203ENST00000370128 GPRASP1Q5JY77 1395 aa23.3■■□□□ 1.32
RTCA-203ENST00000370128 UHRF1BP1LA0JNW5 1464 aa23.3■■□□□ 1.32
RTCA-203ENST00000370128 NBPF1Q3BBV0 1214 aa23.29■■□□□ 1.32
RTCA-203ENST00000370128 ATP10AO60312 1499 aa23.29■■□□□ 1.32
RTCA-203ENST00000370128 TMC1Q8TDI8 760 aa23.28■■□□□ 1.32
RTCA-203ENST00000370128 EFCAB2Q5VUJ9 269 aa23.28■■□□□ 1.32
RTCA-203ENST00000370128 KTN1Q86UP2 1357 aaKnown RBP23.28■■□□□ 1.32
RTCA-203ENST00000370128 ABCC1P33527 1531 aa23.27■■□□□ 1.32
RTCA-203ENST00000370128 GLIPR1L2Q4G1C9 344 aa23.26■■□□□ 1.31
RTCA-203ENST00000370128 RALBP1Q15311 655 aa23.25■■□□□ 1.31
RTCA-203ENST00000370128 MYBBP1AQ9BQG0 1328 aaKnown RBP23.25■■□□□ 1.31
RTCA-203ENST00000370128 LAMC1P11047 1609 aa23.24■■□□□ 1.31
RTCA-203ENST00000370128 BRD4O60885 1362 aaPredicted RBP23.24■■□□□ 1.31
RTCA-203ENST00000370128 TRAPPC8Q9Y2L5 1435 aa23.24■■□□□ 1.31
RTCA-203ENST00000370128 NUDCQ9Y266 331 aa23.23■■□□□ 1.31
RTCA-203ENST00000370128 PRDM15P57071 1507 aaPredicted RBP23.23■■□□□ 1.31
RTCA-203ENST00000370128 LRPPRCP42704 1394 aaKnown RBP23.23■■□□□ 1.31
RTCA-203ENST00000370128 RSPH6AQ9H0K4 717 aa23.21■■□□□ 1.31
RTCA-203ENST00000370128 WASHC2CQ9Y4E1 1318 aa23.21■■□□□ 1.31
RTCA-203ENST00000370128 ZMYND15Q9H091 742 aa23.2■■□□□ 1.3
RTCA-203ENST00000370128 EIF2AK4Q9P2K8 1649 aaKnown RBP23.2■■□□□ 1.3
RTCA-203ENST00000370128 TESK2Q96S53 571 aa23.19■■□□□ 1.3
RTCA-203ENST00000370128 COL17A1Q9UMD9 1497 aaPredicted RBP23.19■■□□□ 1.3
RTCA-203ENST00000370128 PER1O15534 1290 aaPredicted RBP23.18■■□□□ 1.3
RTCA-203ENST00000370128 B4GALNT3Q6L9W6 998 aa23.18■■□□□ 1.3
RTCA-203ENST00000370128 PARD3Q8TEW0 1356 aa23.17■■□□□ 1.3
RTCA-203ENST00000370128 RNF123Q5XPI4 1314 aa23.17■■□□□ 1.3
RTCA-203ENST00000370128 SENP3-EIF4A1A0A087X0R7 540 aa23.16■■□□□ 1.3
RTCA-203ENST00000370128 DISP3Q9P2K9 1392 aa23.16■■□□□ 1.3
RTCA-203ENST00000370128 ARAP3Q8WWN8 1544 aa23.15■■□□□ 1.3
RTCA-203ENST00000370128 SPAG9O60271 1321 aaKnown RBP23.14■■□□□ 1.29
RTCA-203ENST00000370128 RTEL1-TNFRSF6BF6WH68 1400 aa23.14■■□□□ 1.29
RTCA-203ENST00000370128 AFAP1Q8N556 730 aa23.13■■□□□ 1.29
RTCA-203ENST00000370128 IPO9Q96P70 1041 aaKnown RBP23.13■■□□□ 1.29
RTCA-203ENST00000370128 NLRP13Q86W25 1043 aa23.13■■□□□ 1.29
RTCA-203ENST00000370128 ZFYVE16Q7Z3T8 1539 aa23.12■■□□□ 1.29
RTCA-203ENST00000370128 RNF17Q9BXT8 1623 aaKnown RBP23.11■■□□□ 1.29
RTCA-203ENST00000370128 VSIG10Q8N0Z9 540 aa23.08■■□□□ 1.28
RTCA-203ENST00000370128 ZBTB47Q9UFB7 747 aaPredicted RBP23.08■■□□□ 1.28
RTCA-203ENST00000370128 BRPF3Q9ULD4 1205 aa23.08■■□□□ 1.28
RTCA-203ENST00000370128 TMF1P82094 1093 aa23.07■■□□□ 1.28
RTCA-203ENST00000370128 USP35Q9P2H5 1018 aa23.07■■□□□ 1.28
RTCA-203ENST00000370128 TRPM2O94759 1503 aa23.07■■□□□ 1.28
RTCA-203ENST00000370128 WDR7Q9Y4E6 1490 aa23.06■■□□□ 1.28
RTCA-203ENST00000370128 DEPDC5O75140 1603 aa23.05■■□□□ 1.28
RTCA-203ENST00000370128 MADDQ8WXG6 1647 aa23.05■■□□□ 1.28
RTCA-203ENST00000370128 ANP32AP39687 249 aaKnown RBP23.05■■□□□ 1.28
RTCA-203ENST00000370128 PANK3Q9H999 370 aa23.05■■□□□ 1.28
RTCA-203ENST00000370128 PTPRTO14522 1441 aa23.05■■□□□ 1.28
RTCA-203ENST00000370128 CC2D1BQ5T0F9 858 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms