RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 MLECQ14165 292 aa15.41■□□□□ 0.06
HCFC1-202ENST00000369984 CCDC70Q6NSX1 233 aa15.4■□□□□ 0.06
HCFC1-202ENST00000369984 CHMP4AQ9BY43 222 aa15.4■□□□□ 0.06
HCFC1-202ENST00000369984 GPS2Q13227 327 aa15.4■□□□□ 0.06
HCFC1-202ENST00000369984 CSB-PGBD3P0DP91 1061 aa15.39■□□□□ 0.05
HCFC1-202ENST00000369984 FOXD1Q16676 465 aa15.39■□□□□ 0.05
HCFC1-202ENST00000369984 HDAC5Q9UQL6 1122 aa15.39■□□□□ 0.05
HCFC1-202ENST00000369984 TSHZ2Q9NRE2 1034 aa15.38■□□□□ 0.05
HCFC1-202ENST00000369984 MARCH6O60337 910 aa15.38■□□□□ 0.05
HCFC1-202ENST00000369984 G3V3G9 751 aa15.38■□□□□ 0.05
HCFC1-202ENST00000369984 DCAF8Q5TAQ9 597 aa15.38■□□□□ 0.05
HCFC1-202ENST00000369984 CENPJQ9HC77 1338 aaPredicted RBP15.37■□□□□ 0.05
HCFC1-202ENST00000369984 TPM2P07951 284 aa15.37■□□□□ 0.05
HCFC1-202ENST00000369984 CCDC146Q8IYE0 955 aa15.37■□□□□ 0.05
HCFC1-202ENST00000369984 TPM1P09493 284 aa15.37■□□□□ 0.05
HCFC1-202ENST00000369984 CLUAP1Q96AJ1 413 aa15.36■□□□□ 0.05
HCFC1-202ENST00000369984 TOMM22Q9NS69 142 aa15.36■□□□□ 0.05
HCFC1-202ENST00000369984 FOXD4L6Q3SYB3 417 aaPredicted RBP15.35■□□□□ 0.05
HCFC1-202ENST00000369984 FOXD4L3Q6VB84 417 aaPredicted RBP15.35■□□□□ 0.05
HCFC1-202ENST00000369984 ZNF592Q92610 1267 aa15.35■□□□□ 0.05
HCFC1-202ENST00000369984 FAM184AQ8NB25 1140 aa15.35■□□□□ 0.05
HCFC1-202ENST00000369984 DDX49Q9Y6V7 483 aaKnown RBP15.34■□□□□ 0.05
HCFC1-202ENST00000369984 BECN2A8MW95 431 aa15.34■□□□□ 0.05
HCFC1-202ENST00000369984 PKD2Q13563 968 aa15.34■□□□□ 0.05
HCFC1-202ENST00000369984 SKOR2Q2VWA4 1001 aaPredicted RBP15.34■□□□□ 0.05
HCFC1-202ENST00000369984 ATP6V1DQ9Y5K8 247 aa15.34■□□□□ 0.05
HCFC1-202ENST00000369984 GSE1Q14687 1217 aa15.33■□□□□ 0.04
HCFC1-202ENST00000369984 RILPL2Q969X0 211 aa15.33■□□□□ 0.04
HCFC1-202ENST00000369984 FRAT2O75474 233 aaPredicted RBP15.33■□□□□ 0.04
HCFC1-202ENST00000369984 TEX35Q5T0J7 233 aa15.32■□□□□ 0.04
HCFC1-202ENST00000369984 PHLDB1Q86UU1 1377 aa15.3■□□□□ 0.04
HCFC1-202ENST00000369984 AKAP17AQ02040 695 aaKnown RBP15.3■□□□□ 0.04
HCFC1-202ENST00000369984 LMOD3Q0VAK6 560 aa15.3■□□□□ 0.04
HCFC1-202ENST00000369984 MCTP1Q6DN14 999 aa15.3■□□□□ 0.04
HCFC1-202ENST00000369984 GGT6Q6P531 493 aa15.3■□□□□ 0.04
HCFC1-202ENST00000369984 DCAF8L1A6NGE4 600 aa15.29■□□□□ 0.04
HCFC1-202ENST00000369984 CENPQQ7L2Z9 268 aaPredicted RBP15.29■□□□□ 0.04
HCFC1-202ENST00000369984 MAP7D2Q96T17 732 aa15.29■□□□□ 0.04
HCFC1-202ENST00000369984 CCDC9Q9Y3X0 531 aaKnown RBP15.28■□□□□ 0.04
HCFC1-202ENST00000369984 TERF2IPQ9NYB0 399 aa15.28■□□□□ 0.04
HCFC1-202ENST00000369984 ANKRD45Q5TZF3 282 aa15.28■□□□□ 0.04
HCFC1-202ENST00000369984 FAM161AQ3B820 660 aa15.28■□□□□ 0.04
HCFC1-202ENST00000369984 PCMTD1Q96MG8 357 aaPredicted RBP15.28■□□□□ 0.04
HCFC1-202ENST00000369984 RAB3GAP2Q9H2M9 1393 aa15.27■□□□□ 0.04
HCFC1-202ENST00000369984 NOM1Q5C9Z4 860 aaKnown RBP15.27■□□□□ 0.03
HCFC1-202ENST00000369984 WWC1Q8IX03 1113 aa15.27■□□□□ 0.03
HCFC1-202ENST00000369984 CHMP4CQ96CF2 233 aa15.26■□□□□ 0.03
HCFC1-202ENST00000369984 MPHOSPH9Q99550 1183 aa15.26■□□□□ 0.03
HCFC1-202ENST00000369984 TCEAL9Q9UHQ7 104 aa15.26■□□□□ 0.03
HCFC1-202ENST00000369984 PODXL2Q9NZ53 605 aa15.25■□□□□ 0.03
HCFC1-202ENST00000369984 IPO7O95373 1038 aaKnown RBP15.25■□□□□ 0.03
HCFC1-202ENST00000369984 PDE3BQ13370 1112 aa15.25■□□□□ 0.03
HCFC1-202ENST00000369984 HOMER1Q86YM7 354 aa15.25■□□□□ 0.03
HCFC1-202ENST00000369984 SLC4A3P48751 1232 aa15.25■□□□□ 0.03
HCFC1-202ENST00000369984 NUP155O75694 1391 aa15.25■□□□□ 0.03
HCFC1-202ENST00000369984 KIF15Q9NS87 1388 aa15.25■□□□□ 0.03
HCFC1-202ENST00000369984 FAM13BQ9NYF5 915 aa15.25■□□□□ 0.03
HCFC1-202ENST00000369984 NACADO15069 1562 aa15.24■□□□□ 0.03
HCFC1-202ENST00000369984 CUX2O14529 1486 aa15.23■□□□□ 0.03
HCFC1-202ENST00000369984 AMPHP49418 695 aa15.23■□□□□ 0.03
HCFC1-202ENST00000369984 NLRP13Q86W25 1043 aa15.23■□□□□ 0.03
HCFC1-202ENST00000369984 HOOK1Q9UJC3 728 aaKnown RBP15.23■□□□□ 0.03
HCFC1-202ENST00000369984 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.23■□□□□ 0.03
HCFC1-202ENST00000369984 ANKRD20A12PQ8NF67 263 aa15.23■□□□□ 0.03
HCFC1-202ENST00000369984 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
HCFC1-202ENST00000369984 SYNE3Q6ZMZ3 975 aa15.23■□□□□ 0.03
HCFC1-202ENST00000369984 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
HCFC1-202ENST00000369984 GTF2E1P29083 439 aaPredicted RBP15.22■□□□□ 0.03
HCFC1-202ENST00000369984 ABCC8Q09428 1581 aa15.22■□□□□ 0.03
HCFC1-202ENST00000369984 PDE4AP27815 886 aa15.22■□□□□ 0.03
HCFC1-202ENST00000369984 TRIM29Q14134 588 aa15.22■□□□□ 0.03
HCFC1-202ENST00000369984 BAZ1AQ9NRL2 1556 aaPredicted RBP15.22■□□□□ 0.03
HCFC1-202ENST00000369984 VPS8Q8N3P4 1428 aa15.22■□□□□ 0.03
HCFC1-202ENST00000369984 CARMIL1Q5VZK9 1371 aa15.22■□□□□ 0.03
HCFC1-202ENST00000369984 RUFY1Q96T51 708 aa15.21■□□□□ 0.03
HCFC1-202ENST00000369984 RRP7AQ9Y3A4 280 aaKnown RBP15.21■□□□□ 0.02
HCFC1-202ENST00000369984 KAT6BQ8WYB5 2073 aa15.2■□□□□ 0.02
HCFC1-202ENST00000369984 AK7Q96M32 723 aa15.2■□□□□ 0.02
HCFC1-202ENST00000369984 DIAPH3Q9NSV4 1193 aa15.2■□□□□ 0.02
HCFC1-202ENST00000369984 PLCD4Q9BRC7 762 aa15.2■□□□□ 0.02
HCFC1-202ENST00000369984 LRRFIP1Q32MZ4 808 aaKnown RBP15.2■□□□□ 0.02
HCFC1-202ENST00000369984 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.2■□□□□ 0.023e-6■■□□□ 14.2
HCFC1-202ENST00000369984 LTV1Q96GA3 475 aaPredicted RBP15.2■□□□□ 0.02
HCFC1-202ENST00000369984 PKNOX2Q96KN3 472 aa15.19■□□□□ 0.02
HCFC1-202ENST00000369984 PRDM2Q13029 1718 aa15.19■□□□□ 0.02
HCFC1-202ENST00000369984 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.19■□□□□ 0.02
HCFC1-202ENST00000369984 ANKRD30AQ9BXX3 1397 aa15.19■□□□□ 0.02
HCFC1-202ENST00000369984 NGDNQ8NEJ9 315 aaKnown RBP15.19■□□□□ 0.02
HCFC1-202ENST00000369984 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.18■□□□□ 0.02
HCFC1-202ENST00000369984 PLIN1O60240 522 aa15.18■□□□□ 0.02
HCFC1-202ENST00000369984 BCL2L13Q9BXK5 485 aa15.18■□□□□ 0.02
HCFC1-202ENST00000369984 REC8O95072 547 aa15.18■□□□□ 0.02
HCFC1-202ENST00000369984 AMOTL1Q8IY63 956 aa15.18■□□□□ 0.02
HCFC1-202ENST00000369984 MYBBP1AQ9BQG0 1328 aaKnown RBP15.17■□□□□ 0.02
HCFC1-202ENST00000369984 RDXP35241 583 aaKnown RBP15.17■□□□□ 0.02
HCFC1-202ENST00000369984 RAD21O60216 631 aa15.17■□□□□ 0.02
HCFC1-202ENST00000369984 RUFY2Q8WXA3 655 aa15.17■□□□□ 0.02
HCFC1-202ENST00000369984 ANO2Q9NQ90 1003 aa15.17■□□□□ 0.02
HCFC1-202ENST00000369984 FMN1Q68DA7 1419 aa15.17■□□□□ 0.02
HCFC1-202ENST00000369984 BICD2Q8TD16 824 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms