RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 GPS2Q13227 327 aa13.01□□□□□ -0.33
PRDM1-201ENST00000369089 CHMP5Q9NZZ3 219 aa13.01□□□□□ -0.33
PRDM1-201ENST00000369089 TRAK2O60296 914 aa13.01□□□□□ -0.33
PRDM1-201ENST00000369089 WDR43Q15061 677 aaKnown RBP eCLIP13.01□□□□□ -0.33
PRDM1-201ENST00000369089 CALCOCO1Q9P1Z2 691 aa13.01□□□□□ -0.33
PRDM1-201ENST00000369089 DIAPH3Q9NSV4 1193 aa13□□□□□ -0.33
PRDM1-201ENST00000369089 POGKQ9P215 609 aa13□□□□□ -0.33
PRDM1-201ENST00000369089 CWC15Q9P013 229 aaKnown RBP13□□□□□ -0.33
PRDM1-201ENST00000369089 DYNC1I1O14576 645 aa12.99□□□□□ -0.33
PRDM1-201ENST00000369089 RUSC2Q8N2Y8 1516 aa12.99□□□□□ -0.33
PRDM1-201ENST00000369089 ESF1Q9H501 851 aaKnown RBP12.99□□□□□ -0.33
PRDM1-201ENST00000369089 CCDC39Q9UFE4 941 aa12.98□□□□□ -0.33
PRDM1-201ENST00000369089 DDX49Q9Y6V7 483 aaKnown RBP12.98□□□□□ -0.33
PRDM1-201ENST00000369089 NRDCO43847 1150 aa12.98□□□□□ -0.33
PRDM1-201ENST00000369089 SYAP1Q96A49 352 aaPredicted RBP12.98□□□□□ -0.33
PRDM1-201ENST00000369089 BCCIPQ9P287 314 aaKnown RBP eCLIP12.97□□□□□ -0.33
PRDM1-201ENST00000369089 EIF4G1Q04637 1599 aaKnown RBP12.97□□□□□ -0.33
PRDM1-201ENST00000369089 TIGD1Q96MW7 591 aa12.97□□□□□ -0.33
PRDM1-201ENST00000369089 FAM193AP78312 1265 aa12.96□□□□□ -0.33
PRDM1-201ENST00000369089 EXOC6Q8TAG9 804 aa12.96□□□□□ -0.33
PRDM1-201ENST00000369089 RAPGEF2Q9Y4G8 1499 aa12.96□□□□□ -0.33
PRDM1-201ENST00000369089 DEF6Q9H4E7 631 aa12.96□□□□□ -0.34
PRDM1-201ENST00000369089 STAG3Q9UJ98 1225 aa12.96□□□□□ -0.34
PRDM1-201ENST00000369089 CENPJQ9HC77 1338 aaPredicted RBP12.96□□□□□ -0.34
PRDM1-201ENST00000369089 CENPQQ7L2Z9 268 aaPredicted RBP12.95□□□□□ -0.34
PRDM1-201ENST00000369089 SASS6Q6UVJ0 657 aa12.95□□□□□ -0.34
PRDM1-201ENST00000369089 DRC7Q8IY82 874 aa12.95□□□□□ -0.34
PRDM1-201ENST00000369089 CCDC9Q9Y3X0 531 aaKnown RBP12.95□□□□□ -0.34
PRDM1-201ENST00000369089 CCDC94Q9BW85 323 aaPredicted RBP12.94□□□□□ -0.34
PRDM1-201ENST00000369089 PDCL2Q8N4E4 241 aa12.94□□□□□ -0.34
PRDM1-201ENST00000369089 RRP1P56182 461 aaKnown RBP12.92□□□□□ -0.34
PRDM1-201ENST00000369089 ZFP91Q96JP5 570 aaPredicted RBP12.92□□□□□ -0.34
PRDM1-201ENST00000369089 RGL3Q3MIN7 710 aa12.92□□□□□ -0.34
PRDM1-201ENST00000369089 HDAC5Q9UQL6 1122 aa12.91□□□□□ -0.34
PRDM1-201ENST00000369089 HMGB1P09429 215 aaKnown RBP12.91□□□□□ -0.34
PRDM1-201ENST00000369089 GTF2A1P52655 376 aaPredicted RBP12.91□□□□□ -0.34
PRDM1-201ENST00000369089 NBPF1Q3BBV0 1214 aa12.91□□□□□ -0.34
PRDM1-201ENST00000369089 GPATCH11Q8N954 259 aa12.89□□□□□ -0.35
PRDM1-201ENST00000369089 UTP14CQ5TAP6 766 aaKnown RBP12.89□□□□□ -0.35
PRDM1-201ENST00000369089 LMOD3Q0VAK6 560 aa12.89□□□□□ -0.35
PRDM1-201ENST00000369089 FMN1Q68DA7 1419 aa12.88□□□□□ -0.35
PRDM1-201ENST00000369089 ERICH4A6NGS2 130 aa12.88□□□□□ -0.35
PRDM1-201ENST00000369089 PHF14O94880 888 aa12.88□□□□□ -0.35
PRDM1-201ENST00000369089 ZNF622Q969S3 477 aaKnown RBP eCLIP12.88□□□□□ -0.35
PRDM1-201ENST00000369089 XRCC6P12956 609 aaKnown RBP eCLIP12.87□□□□□ -0.35
PRDM1-201ENST00000369089 SETD5Q9C0A6 1442 aa12.87□□□□□ -0.35
PRDM1-201ENST00000369089 MCM4P33991 863 aa12.87□□□□□ -0.35
PRDM1-201ENST00000369089 FANCD2Q9BXW9 1451 aa12.87□□□□□ -0.35
PRDM1-201ENST00000369089 ARHGAP35Q9NRY4 1499 aa12.87□□□□□ -0.35
PRDM1-201ENST00000369089 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
PRDM1-201ENST00000369089 KTN1Q86UP2 1357 aaKnown RBP12.86□□□□□ -0.35
PRDM1-201ENST00000369089 RSPH4AQ5TD94 716 aa12.86□□□□□ -0.35
PRDM1-201ENST00000369089 AEBP2Q6ZN18 517 aaPredicted RBP12.86□□□□□ -0.35
PRDM1-201ENST00000369089 TEX2Q8IWB9 1127 aa12.86□□□□□ -0.35
PRDM1-201ENST00000369089 DHX57Q6P158 1386 aaKnown RBP12.86□□□□□ -0.35
PRDM1-201ENST00000369089 PDE3BQ13370 1112 aa12.86□□□□□ -0.35
PRDM1-201ENST00000369089 TPRNQ4KMQ1 711 aa12.86□□□□□ -0.35
PRDM1-201ENST00000369089 OFD1O75665 1012 aa12.86□□□□□ -0.35
PRDM1-201ENST00000369089 SSR1P43307 286 aaKnown RBP12.86□□□□□ -0.35
PRDM1-201ENST00000369089 TERF1P54274 439 aa12.85□□□□□ -0.35
PRDM1-201ENST00000369089 MAPK8IP3Q9UPT6 1336 aa12.85□□□□□ -0.35
PRDM1-201ENST00000369089 TRIM6-TRIM34B2RNG4 842 aa12.85□□□□□ -0.35
PRDM1-201ENST00000369089 TRIM34Q9BYJ4 488 aa12.85□□□□□ -0.35
PRDM1-201ENST00000369089 DMTNQ08495 405 aa12.84□□□□□ -0.35
PRDM1-201ENST00000369089 FHOD3Q2V2M9 1422 aa12.84□□□□□ -0.35
PRDM1-201ENST00000369089 CTR9Q6PD62 1173 aa12.84□□□□□ -0.35
PRDM1-201ENST00000369089 STAC3Q96MF2 364 aa12.84□□□□□ -0.35
PRDM1-201ENST00000369089 DCAF11Q8TEB1 546 aa12.84□□□□□ -0.35
PRDM1-201ENST00000369089 PLPPR3Q6T4P5 718 aa12.84□□□□□ -0.35
PRDM1-201ENST00000369089 PPP1R15AO75807 674 aaPredicted RBP12.83□□□□□ -0.35
PRDM1-201ENST00000369089 MFAP1P55081 439 aaKnown RBP12.83□□□□□ -0.35
PRDM1-201ENST00000369089 TRERF1Q96PN7 1200 aa12.82□□□□□ -0.36
PRDM1-201ENST00000369089 PLCD4Q9BRC7 762 aa12.82□□□□□ -0.36
PRDM1-201ENST00000369089 CARMIL2Q6F5E8 1435 aa12.82□□□□□ -0.36
PRDM1-201ENST00000369089 RAB3GAP2Q9H2M9 1393 aa12.81□□□□□ -0.36
PRDM1-201ENST00000369089 XPCQ01831 940 aaPredicted RBP12.81□□□□□ -0.36
PRDM1-201ENST00000369089 ZRSR1Q15695 479 aaKnown RBP12.81□□□□□ -0.36
PRDM1-201ENST00000369089 CNPY4Q8N129 248 aa12.81□□□□□ -0.36
PRDM1-201ENST00000369089 CARD11Q9BXL7 1154 aa12.81□□□□□ -0.36
PRDM1-201ENST00000369089 CASC1Q6TDU7 716 aa12.8□□□□□ -0.36
PRDM1-201ENST00000369089 USP8P40818 1118 aa12.8□□□□□ -0.36
PRDM1-201ENST00000369089 BANK1Q8NDB2 785 aa12.8□□□□□ -0.36
PRDM1-201ENST00000369089 ARGLU1Q9NWB6 273 aaPredicted RBP12.8□□□□□ -0.36
PRDM1-201ENST00000369089 RDXP35241 583 aaKnown RBP12.8□□□□□ -0.36
PRDM1-201ENST00000369089 IGF1RP08069 1367 aa12.8□□□□□ -0.36
PRDM1-201ENST00000369089 MCM5P33992 734 aa12.8□□□□□ -0.36
PRDM1-201ENST00000369089 TDO2P48775 406 aa12.8□□□□□ -0.36
PRDM1-201ENST00000369089 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
PRDM1-201ENST00000369089 TNNT1P13805 278 aa12.79□□□□□ -0.36
PRDM1-201ENST00000369089 HSPA5P11021 654 aaKnown RBP12.79□□□□□ -0.36
PRDM1-201ENST00000369089 PANK2Q9BZ23 570 aa12.79□□□□□ -0.36
PRDM1-201ENST00000369089 CRBNQ96SW2 442 aa12.78□□□□□ -0.36
PRDM1-201ENST00000369089 ZNF592Q92610 1267 aa12.78□□□□□ -0.36
PRDM1-201ENST00000369089 RALBP1Q15311 655 aa12.77□□□□□ -0.36
PRDM1-201ENST00000369089 TPM3P06753 285 aa12.77□□□□□ -0.36
PRDM1-201ENST00000369089 GTF2E1P29083 439 aaPredicted RBP12.77□□□□□ -0.36
PRDM1-201ENST00000369089 PRIMPOLQ96LW4 560 aa12.77□□□□□ -0.36
PRDM1-201ENST00000369089 AK7Q96M32 723 aa12.77□□□□□ -0.36
PRDM1-201ENST00000369089 OS9Q13438 667 aaPredicted RBP12.77□□□□□ -0.37
PRDM1-201ENST00000369089 LEKR1Q6ZMV7 388 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms