RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 SYCP2Q9BX26 1530 aa20.69■□□□□ 0.9
SEMA6C-202ENST00000368912 CLASP1Q7Z460 1538 aa20.68■□□□□ 0.9
SEMA6C-202ENST00000368912 WASHC2CQ9Y4E1 1318 aa20.68■□□□□ 0.9
SEMA6C-202ENST00000368912 LAS1LQ9Y4W2 734 aaKnown RBP20.67■□□□□ 0.9
SEMA6C-202ENST00000368912 AKNAQ7Z591 1439 aa20.67■□□□□ 0.9
SEMA6C-202ENST00000368912 FANCAO15360 1455 aa20.67■□□□□ 0.9
SEMA6C-202ENST00000368912 WDR7Q9Y4E6 1490 aa20.67■□□□□ 0.9
SEMA6C-202ENST00000368912 HSPA5P11021 654 aaKnown RBP20.65■□□□□ 0.9
SEMA6C-202ENST00000368912 CARD11Q9BXL7 1154 aa20.65■□□□□ 0.9
SEMA6C-202ENST00000368912 PLEKHH2Q8IVE3 1493 aa20.64■□□□□ 0.9
SEMA6C-202ENST00000368912 EIF4G2P78344 907 aaKnown RBP eCLIP20.64■□□□□ 0.9
SEMA6C-202ENST00000368912 KDM6BO15054 1643 aa20.64■□□□□ 0.89
SEMA6C-202ENST00000368912 PLCH2O75038 1416 aa20.64■□□□□ 0.89
SEMA6C-202ENST00000368912 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.63■□□□□ 0.89
SEMA6C-202ENST00000368912 NBPF8Q3BBV2 869 aa20.63■□□□□ 0.89
SEMA6C-202ENST00000368912 ABCC10Q5T3U5 1492 aa20.63■□□□□ 0.89
SEMA6C-202ENST00000368912 ADGRL1O94910 1474 aa20.62■□□□□ 0.89
SEMA6C-202ENST00000368912 CCDC141Q6ZP82 1450 aa20.62■□□□□ 0.89
SEMA6C-202ENST00000368912 TTC37Q6PGP7 1564 aa20.61■□□□□ 0.89
SEMA6C-202ENST00000368912 MAPKBP1O60336 1514 aa20.61■□□□□ 0.89
SEMA6C-202ENST00000368912 TCOF1Q13428 1488 aaKnown RBP20.59■□□□□ 0.89
SEMA6C-202ENST00000368912 NPM2Q86SE8 214 aaKnown RBP20.58■□□□□ 0.89
SEMA6C-202ENST00000368912 RBM10P98175 930 aaKnown RBP20.58■□□□□ 0.88
SEMA6C-202ENST00000368912 KDM5BQ9UGL1 1544 aa20.57■□□□□ 0.88
SEMA6C-202ENST00000368912 ZCCHC11Q5TAX3 1644 aaKnown RBP20.57■□□□□ 0.88
SEMA6C-202ENST00000368912 SAFB2Q14151 953 aaKnown RBP eCLIP20.57■□□□□ 0.88
SEMA6C-202ENST00000368912 ROCK1Q13464 1354 aa20.55■□□□□ 0.88
SEMA6C-202ENST00000368912 KANK1Q14678 1352 aa20.55■□□□□ 0.88
SEMA6C-202ENST00000368912 IPO9Q96P70 1041 aaKnown RBP20.55■□□□□ 0.88
SEMA6C-202ENST00000368912 B4GALNT3Q6L9W6 998 aa20.54■□□□□ 0.88
SEMA6C-202ENST00000368912 ADCY10Q96PN6 1610 aa20.54■□□□□ 0.88
SEMA6C-202ENST00000368912 ANP32CO43423 234 aa20.52■□□□□ 0.88
SEMA6C-202ENST00000368912 ARHGEF12Q9NZN5 1544 aa20.52■□□□□ 0.88
SEMA6C-202ENST00000368912 HSP90AA2PQ14568 343 aaPredicted RBP20.52■□□□□ 0.88
SEMA6C-202ENST00000368912 SHROOM2Q13796 1616 aa20.51■□□□□ 0.87
SEMA6C-202ENST00000368912 NBPF1Q3BBV0 1214 aa20.5■□□□□ 0.87
SEMA6C-202ENST00000368912 MBD5Q9P267 1494 aa20.5■□□□□ 0.87
SEMA6C-202ENST00000368912 CCDC144AA2RUR9 1427 aa20.49■□□□□ 0.87
SEMA6C-202ENST00000368912 STK26Q9P289 416 aa20.49■□□□□ 0.87
SEMA6C-202ENST00000368912 ANKRD30BQ9BXX2 1392 aa20.48■□□□□ 0.87
SEMA6C-202ENST00000368912 PDIA4P13667 645 aaKnown RBP20.48■□□□□ 0.87
SEMA6C-202ENST00000368912 FGD1P98174 961 aa20.47■□□□□ 0.87
SEMA6C-202ENST00000368912 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
SEMA6C-202ENST00000368912 SAMD9LQ8IVG5 1584 aa20.47■□□□□ 0.87
SEMA6C-202ENST00000368912 BCL11BQ9C0K0 894 aaPredicted RBP20.46■□□□□ 0.87
SEMA6C-202ENST00000368912 PPP4R2Q9NY27 417 aa20.46■□□□□ 0.87
SEMA6C-202ENST00000368912 FBXO31Q5XUX0 539 aaPredicted RBP20.46■□□□□ 0.87
SEMA6C-202ENST00000368912 ITSN2Q9NZM3 1697 aa20.46■□□□□ 0.87
SEMA6C-202ENST00000368912 DNMT1P26358 1616 aaKnown RBP20.45■□□□□ 0.86
SEMA6C-202ENST00000368912 C11orf95C9JLR9 678 aaPredicted RBP20.45■□□□□ 0.86
SEMA6C-202ENST00000368912 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.86
SEMA6C-202ENST00000368912 CDC42BPAQ5VT25 1732 aa20.45■□□□□ 0.86
SEMA6C-202ENST00000368912 KIAA1107Q9UPP5 1409 aa20.44■□□□□ 0.86
SEMA6C-202ENST00000368912 UHRF1BP1LA0JNW5 1464 aa20.44■□□□□ 0.86
SEMA6C-202ENST00000368912 NAP1L5Q96NT1 182 aaPredicted RBP20.44■□□□□ 0.86
SEMA6C-202ENST00000368912 AAMPQ13685 434 aa20.41■□□□□ 0.86
SEMA6C-202ENST00000368912 CEBPAP49715 358 aaPredicted RBP20.4■□□□□ 0.86
SEMA6C-202ENST00000368912 ROCK2O75116 1388 aaKnown RBP20.4■□□□□ 0.86
SEMA6C-202ENST00000368912 HNRNPUQ00839 825 aaKnown RBP eCLIP20.4■□□□□ 0.86
SEMA6C-202ENST00000368912 TMEM132EQ6IEE7 984 aa20.4■□□□□ 0.86
SEMA6C-202ENST00000368912 FAM9BQ8IZU0 186 aa20.39■□□□□ 0.85
SEMA6C-202ENST00000368912 TSPOAP1O95153 1857 aa20.38■□□□□ 0.85
SEMA6C-202ENST00000368912 GSE1Q14687 1217 aa20.37■□□□□ 0.85
SEMA6C-202ENST00000368912 PZPP20742 1482 aa20.37■□□□□ 0.85
SEMA6C-202ENST00000368912 TRAK1Q9UPV9 953 aa20.37■□□□□ 0.85
SEMA6C-202ENST00000368912 WASHC2AQ641Q2 1341 aa20.36■□□□□ 0.85
SEMA6C-202ENST00000368912 HSP90AA1P07900 732 aaKnown RBP20.36■□□□□ 0.85
SEMA6C-202ENST00000368912 DENND4BO75064 1496 aaPredicted RBP20.36■□□□□ 0.85
SEMA6C-202ENST00000368912 CFAP70Q5T0N1 1121 aa20.35■□□□□ 0.85
SEMA6C-202ENST00000368912 RIMBP3CA6NJZ7 1639 aa20.35■□□□□ 0.85
SEMA6C-202ENST00000368912 RIMBP3BA6NNM3 1639 aa20.35■□□□□ 0.85
SEMA6C-202ENST00000368912 RIMBP3Q9UFD9 1639 aa20.35■□□□□ 0.85
SEMA6C-202ENST00000368912 USP35Q9P2H5 1018 aa20.35■□□□□ 0.85
SEMA6C-202ENST00000368912 CDC42BPBQ9Y5S2 1711 aa20.35■□□□□ 0.85
SEMA6C-202ENST00000368912 TMC1Q8TDI8 760 aa20.34■□□□□ 0.85
SEMA6C-202ENST00000368912 CFAP65Q6ZU64 1925 aaKnown RBP20.34■□□□□ 0.85
SEMA6C-202ENST00000368912 YEATS2Q9ULM3 1422 aa20.32■□□□□ 0.84
SEMA6C-202ENST00000368912 MYO5CQ9NQX4 1742 aa20.32■□□□□ 0.84
SEMA6C-202ENST00000368912 DHX29Q7Z478 1369 aaKnown RBP20.32■□□□□ 0.84
SEMA6C-202ENST00000368912 PPM1GO15355 546 aaPredicted RBP20.31■□□□□ 0.84
SEMA6C-202ENST00000368912 PREX2Q70Z35 1606 aa20.29■□□□□ 0.84
SEMA6C-202ENST00000368912 FAM43AQ8N2R8 423 aa20.29■□□□□ 0.84
SEMA6C-202ENST00000368912 CC2D1BQ5T0F9 858 aaKnown RBP20.29■□□□□ 0.84
SEMA6C-202ENST00000368912 USP47Q96K76 1375 aa20.28■□□□□ 0.84
SEMA6C-202ENST00000368912 NUTM2FA1L443 756 aa20.27■□□□□ 0.84
SEMA6C-202ENST00000368912 TNNT2P45379 298 aaPredicted RBP20.26■□□□□ 0.83
SEMA6C-202ENST00000368912 IDI1Q13907 227 aa20.25■□□□□ 0.83
SEMA6C-202ENST00000368912 FRAT1Q92837 279 aaPredicted RBP20.25■□□□□ 0.83
SEMA6C-202ENST00000368912 FAM135AQ9P2D6 1515 aa20.25■□□□□ 0.83
SEMA6C-202ENST00000368912 ZNF518AQ6AHZ1 1483 aa20.25■□□□□ 0.83
SEMA6C-202ENST00000368912 ADGRL2O95490 1459 aa20.24■□□□□ 0.83
SEMA6C-202ENST00000368912 MRS2Q9HD23 443 aa20.24■□□□□ 0.83
SEMA6C-202ENST00000368912 A2MP01023 1474 aa20.23■□□□□ 0.83
SEMA6C-202ENST00000368912 RPRD2Q5VT52 1461 aaKnown RBP20.23■□□□□ 0.83
SEMA6C-202ENST00000368912 ADGRF5Q8IZF2 1346 aa20.22■□□□□ 0.83
SEMA6C-202ENST00000368912 RRP9O43818 475 aaKnown RBP20.22■□□□□ 0.83
SEMA6C-202ENST00000368912 ABCC1P33527 1531 aa20.22■□□□□ 0.83
SEMA6C-202ENST00000368912 SHANK2Q9UPX8 1470 aa20.21■□□□□ 0.83
SEMA6C-202ENST00000368912 ATP7AQ04656 1500 aa20.21■□□□□ 0.83
SEMA6C-202ENST00000368912 KIF7Q2M1P5 1343 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms