RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 CCDC88BA6NC98 1476 aa22.45■■□□□ 1.18
SNX27-203ENST00000368843 GBP4Q96PP9 640 aa22.44■■□□□ 1.18
SNX27-203ENST00000368843 HMMRO75330 724 aa22.44■■□□□ 1.18
SNX27-203ENST00000368843 FOXD4L5Q5VV16 416 aaPredicted RBP22.44■■□□□ 1.18
SNX27-203ENST00000368843 FOXD4L4Q8WXT5 416 aaPredicted RBP22.44■■□□□ 1.18
SNX27-203ENST00000368843 TRAK1Q9UPV9 953 aa22.44■■□□□ 1.18
SNX27-203ENST00000368843 PMFBP1Q8TBY8 1022 aa22.43■■□□□ 1.18
SNX27-203ENST00000368843 VPS8Q8N3P4 1428 aa22.42■■□□□ 1.18
SNX27-203ENST00000368843 HDAC5Q9UQL6 1122 aa22.42■■□□□ 1.18
SNX27-203ENST00000368843 TPM4P67936 248 aa22.42■■□□□ 1.18
SNX27-203ENST00000368843 RAB3GAP2Q9H2M9 1393 aa22.41■■□□□ 1.18
SNX27-203ENST00000368843 CLUAP1Q96AJ1 413 aa22.41■■□□□ 1.18
SNX27-203ENST00000368843 LMOD3Q0VAK6 560 aa22.4■■□□□ 1.18
SNX27-203ENST00000368843 MARCH6O60337 910 aa22.38■■□□□ 1.17
SNX27-203ENST00000368843 MEX3CQ5U5Q3 659 aaKnown RBP22.38■■□□□ 1.17
SNX27-203ENST00000368843 C1orf141Q5JVX7 400 aa22.37■■□□□ 1.17
SNX27-203ENST00000368843 PTMSP20962 102 aa22.37■■□□□ 1.17
SNX27-203ENST00000368843 CCDC18Q5T9S5 1454 aa22.35■■□□□ 1.17
SNX27-203ENST00000368843 SYAP1Q96A49 352 aaPredicted RBP22.34■■□□□ 1.17
SNX27-203ENST00000368843 CCDC34Q96HJ3 373 aa22.34■■□□□ 1.17
SNX27-203ENST00000368843 RRP7AQ9Y3A4 280 aaKnown RBP22.34■■□□□ 1.17
SNX27-203ENST00000368843 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
SNX27-203ENST00000368843 RBM19Q9Y4C8 960 aaKnown RBP22.33■■□□□ 1.17
SNX27-203ENST00000368843 NGEFQ8N5V2 710 aa22.33■■□□□ 1.17
SNX27-203ENST00000368843 FHOD3Q2V2M9 1422 aa22.33■■□□□ 1.16
SNX27-203ENST00000368843 CENPJQ9HC77 1338 aaPredicted RBP22.33■■□□□ 1.16
SNX27-203ENST00000368843 FBXO3Q9UK99 471 aa22.33■■□□□ 1.16
SNX27-203ENST00000368843 MROH2BQ7Z745 1585 aa22.29■■□□□ 1.16
SNX27-203ENST00000368843 COG3Q96JB2 828 aa22.29■■□□□ 1.16
SNX27-203ENST00000368843 RAD21O60216 631 aa22.29■■□□□ 1.16
SNX27-203ENST00000368843 CYB5RLQ6IPT4 315 aa22.28■■□□□ 1.16
SNX27-203ENST00000368843 A0A0U1RQG5 324 aaPredicted RBP22.27■■□□□ 1.16
SNX27-203ENST00000368843 CSPP1Q1MSJ5 1256 aa22.27■■□□□ 1.16
SNX27-203ENST00000368843 WWC1Q8IX03 1113 aa22.27■■□□□ 1.16
SNX27-203ENST00000368843 SYTL4Q96C24 671 aaPredicted RBP22.27■■□□□ 1.16
SNX27-203ENST00000368843 KIF16BQ96L93 1317 aa22.27■■□□□ 1.16
SNX27-203ENST00000368843 L3MBTL2Q969R5 705 aa22.26■■□□□ 1.15
SNX27-203ENST00000368843 RILPL2Q969X0 211 aa22.26■■□□□ 1.15
SNX27-203ENST00000368843 FOXD4L6Q3SYB3 417 aaPredicted RBP22.26■■□□□ 1.15
SNX27-203ENST00000368843 FOXD4L3Q6VB84 417 aaPredicted RBP22.26■■□□□ 1.15
SNX27-203ENST00000368843 TRIM34Q9BYJ4 488 aa22.26■■□□□ 1.15
SNX27-203ENST00000368843 ELL2O00472 640 aaPredicted RBP22.26■■□□□ 1.15
SNX27-203ENST00000368843 JPH4Q96JJ6 628 aa22.26■■□□□ 1.15
SNX27-203ENST00000368843 RSPH4AQ5TD94 716 aa22.25■■□□□ 1.15
SNX27-203ENST00000368843 FBXW7Q969H0 707 aa22.25■■□□□ 1.15
SNX27-203ENST00000368843 TTC5Q8N0Z6 440 aa22.24■■□□□ 1.15
SNX27-203ENST00000368843 SF3A1Q15459 793 aaKnown RBP22.23■■□□□ 1.15
SNX27-203ENST00000368843 WIZO95785 1651 aa22.23■■□□□ 1.15
SNX27-203ENST00000368843 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.22■■□□□ 1.15
SNX27-203ENST00000368843 PES1O00541 588 aaKnown RBP22.22■■□□□ 1.15
SNX27-203ENST00000368843 TCERG1O14776 1098 aaKnown RBP22.22■■□□□ 1.15
SNX27-203ENST00000368843 CEP89Q96ST8 783 aa22.22■■□□□ 1.15
SNX27-203ENST00000368843 RAPGEF2Q9Y4G8 1499 aa22.22■■□□□ 1.15
SNX27-203ENST00000368843 CCDC144AA2RUR9 1427 aa22.22■■□□□ 1.15
SNX27-203ENST00000368843 EIF2S2P20042 333 aaKnown RBP22.21■■□□□ 1.15
SNX27-203ENST00000368843 MINK1Q8N4C8 1332 aaPredicted RBP22.21■■□□□ 1.15
SNX27-203ENST00000368843 NOL10Q9BSC4 688 aaKnown RBP22.21■■□□□ 1.15
SNX27-203ENST00000368843 H3BQV1 296 aa22.21■■□□□ 1.15
SNX27-203ENST00000368843 IFFO2Q5TF58 517 aa22.21■■□□□ 1.15
SNX27-203ENST00000368843 KLHL34Q8N239 644 aa22.21■■□□□ 1.15
SNX27-203ENST00000368843 TEFQ10587 303 aa22.21■■□□□ 1.15
SNX27-203ENST00000368843 CTDP1Q9Y5B0 961 aaPredicted RBP22.21■■□□□ 1.15
SNX27-203ENST00000368843 UACAQ9BZF9 1416 aa22.2■■□□□ 1.14
SNX27-203ENST00000368843 PANK3Q9H999 370 aa22.19■■□□□ 1.14
SNX27-203ENST00000368843 TCEAL9Q9UHQ7 104 aa22.19■■□□□ 1.14
SNX27-203ENST00000368843 AKAP17AQ02040 695 aaKnown RBP22.19■■□□□ 1.14
SNX27-203ENST00000368843 ST18O60284 1047 aa22.19■■□□□ 1.14
SNX27-203ENST00000368843 PSME1Q06323 249 aa22.19■■□□□ 1.14
SNX27-203ENST00000368843 NECTIN2Q92692 538 aa22.19■■□□□ 1.14
SNX27-203ENST00000368843 NLRP13Q86W25 1043 aa22.19■■□□□ 1.14
SNX27-203ENST00000368843 EVC2Q86UK5 1308 aa22.18■■□□□ 1.14
SNX27-203ENST00000368843 TPD52L1Q16890 204 aaPredicted RBP22.18■■□□□ 1.14
SNX27-203ENST00000368843 BCL2L13Q9BXK5 485 aa22.18■■□□□ 1.14
SNX27-203ENST00000368843 AMOTL1Q8IY63 956 aa22.17■■□□□ 1.14
SNX27-203ENST00000368843 KIF15Q9NS87 1388 aa22.17■■□□□ 1.14
SNX27-203ENST00000368843 KIF3AQ9Y496 699 aa22.16■■□□□ 1.14
SNX27-203ENST00000368843 CGNL1Q0VF96 1302 aa22.16■■□□□ 1.14
SNX27-203ENST00000368843 FAM184AQ8NB25 1140 aa22.16■■□□□ 1.14
SNX27-203ENST00000368843 VGFO15240 615 aaPredicted RBP22.15■■□□□ 1.14
SNX27-203ENST00000368843 ANKRD45Q5TZF3 282 aa22.15■■□□□ 1.14
SNX27-203ENST00000368843 NEXNQ0ZGT2 675 aa22.14■■□□□ 1.14
SNX27-203ENST00000368843 VPS37DQ86XT2 251 aa22.14■■□□□ 1.14
SNX27-203ENST00000368843 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.14
SNX27-203ENST00000368843 C9orf78Q9NZ63 289 aaPredicted RBP22.13■■□□□ 1.13
SNX27-203ENST00000368843 SLC4A3P48751 1232 aa22.13■■□□□ 1.13
SNX27-203ENST00000368843 PHLDB1Q86UU1 1377 aa22.12■■□□□ 1.13
SNX27-203ENST00000368843 SYNE3Q6ZMZ3 975 aa22.12■■□□□ 1.13
SNX27-203ENST00000368843 ST20-MTHFSA0A0A6YYL1 179 aa22.12■■□□□ 1.13
SNX27-203ENST00000368843 PRDM2Q13029 1718 aa22.12■■□□□ 1.13
SNX27-203ENST00000368843 TPM3P06753 285 aa22.12■■□□□ 1.13
SNX27-203ENST00000368843 GOLGA6L3A6NEY3 463 aa22.11■■□□□ 1.13
SNX27-203ENST00000368843 TOP2AP11388 1531 aaKnown RBP22.1■■□□□ 1.13
SNX27-203ENST00000368843 GOLGA6L1Q8N7Z2 621 aa22.1■■□□□ 1.13
SNX27-203ENST00000368843 MYBBP1AQ9BQG0 1328 aaKnown RBP22.1■■□□□ 1.13
SNX27-203ENST00000368843 PHF14O94880 888 aa22.1■■□□□ 1.13
SNX27-203ENST00000368843 APPP05067 770 aa22.1■■□□□ 1.13
SNX27-203ENST00000368843 PATL2C9JE40 543 aaKnown RBP22.09■■□□□ 1.13
SNX27-203ENST00000368843 TNNT3P45378 269 aaPredicted RBP22.09■■□□□ 1.13
SNX27-203ENST00000368843 CWC22Q9HCG8 908 aaKnown RBP22.08■■□□□ 1.13
SNX27-203ENST00000368843 MCTP1Q6DN14 999 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms