RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 GRIN2AQ12879 1464 aa11.01□□□□□ -0.65
PTPRK-206ENST00000368215 THOC2Q8NI27 1593 aaKnown RBP11.01□□□□□ -0.65
PTPRK-206ENST00000368215 MAPK8IP3Q9UPT6 1336 aa11□□□□□ -0.65
PTPRK-206ENST00000368215 EXOC6Q8TAG9 804 aa11□□□□□ -0.65
PTPRK-206ENST00000368215 ROCK1Q13464 1354 aa11□□□□□ -0.65
PTPRK-206ENST00000368215 ARHGEF11O15085 1522 aa11□□□□□ -0.65
PTPRK-206ENST00000368215 ARHGAP5Q13017 1502 aa11□□□□□ -0.65
PTPRK-206ENST00000368215 FTSJ3Q8IY81 847 aaKnown RBP11□□□□□ -0.65
PTPRK-206ENST00000368215 CAMSAP2Q08AD1 1489 aa10.98□□□□□ -0.65
PTPRK-206ENST00000368215 U2AF1L5P0DN76 240 aaPredicted RBP10.98□□□□□ -0.65
PTPRK-206ENST00000368215 U2AF1Q01081 240 aaKnown RBP eCLIP10.98□□□□□ -0.65
PTPRK-206ENST00000368215 GOLGA2Q08379 1002 aa10.98□□□□□ -0.65
PTPRK-206ENST00000368215 ARXQ96QS3 562 aa10.98□□□□□ -0.65
PTPRK-206ENST00000368215 EIF3AQ14152 1382 aaKnown RBP10.98□□□□□ -0.65
PTPRK-206ENST00000368215 HSP90AA1P07900 732 aaKnown RBP10.97□□□□□ -0.65
PTPRK-206ENST00000368215 PDE3BQ13370 1112 aa10.97□□□□□ -0.65
PTPRK-206ENST00000368215 RRP1P56182 461 aaKnown RBP10.97□□□□□ -0.65
PTPRK-206ENST00000368215 RRP7AQ9Y3A4 280 aaKnown RBP10.97□□□□□ -0.65
PTPRK-206ENST00000368215 NCOA1Q15788 1441 aa10.97□□□□□ -0.65
PTPRK-206ENST00000368215 DDRGK1Q96HY6 314 aa10.96□□□□□ -0.65
PTPRK-206ENST00000368215 AKNAQ7Z591 1439 aa10.96□□□□□ -0.66
PTPRK-206ENST00000368215 UGGT2Q9NYU1 1516 aa10.96□□□□□ -0.66
PTPRK-206ENST00000368215 C14orf37Q86TY3 774 aa10.96□□□□□ -0.66
PTPRK-206ENST00000368215 SOX12O15370 315 aa10.95□□□□□ -0.66
PTPRK-206ENST00000368215 CDCA7LQ96GN5 454 aa10.95□□□□□ -0.66
PTPRK-206ENST00000368215 CTTNBP2Q8WZ74 1663 aa10.95□□□□□ -0.66
PTPRK-206ENST00000368215 ZBTB7CA1YPR0 619 aa10.95□□□□□ -0.66
PTPRK-206ENST00000368215 MAGI1Q96QZ7 1491 aaPredicted RBP10.95□□□□□ -0.66
PTPRK-206ENST00000368215 APAF1O14727 1248 aa10.94□□□□□ -0.66
PTPRK-206ENST00000368215 CFAP70Q5T0N1 1121 aa10.94□□□□□ -0.66
PTPRK-206ENST00000368215 PNISRQ8TF01 805 aaKnown RBP10.94□□□□□ -0.66
PTPRK-206ENST00000368215 CFAP43Q8NDM7 1665 aa10.93□□□□□ -0.66
PTPRK-206ENST00000368215 CRBNQ96SW2 442 aa10.93□□□□□ -0.66
PTPRK-206ENST00000368215 CLUAP1Q96AJ1 413 aa10.93□□□□□ -0.66
PTPRK-206ENST00000368215 TCERG1O14776 1098 aaKnown RBP10.92□□□□□ -0.66
PTPRK-206ENST00000368215 NUP153P49790 1475 aaKnown RBP10.92□□□□□ -0.66
PTPRK-206ENST00000368215 RPRD2Q5VT52 1461 aaKnown RBP10.92□□□□□ -0.66
PTPRK-206ENST00000368215 TMEM132EQ6IEE7 984 aa10.92□□□□□ -0.66
PTPRK-206ENST00000368215 ADAMTS8Q9UP79 889 aa10.92□□□□□ -0.66
PTPRK-206ENST00000368215 CYB5RLQ6IPT4 315 aa10.91□□□□□ -0.66
PTPRK-206ENST00000368215 GPATCH8Q9UKJ3 1502 aaKnown RBP10.91□□□□□ -0.66
PTPRK-206ENST00000368215 OSCARQ8IYS5 282 aa10.91□□□□□ -0.66
PTPRK-206ENST00000368215 BCL2L13Q9BXK5 485 aa10.91□□□□□ -0.66
PTPRK-206ENST00000368215 BRD4O60885 1362 aaPredicted RBP10.9□□□□□ -0.66
PTPRK-206ENST00000368215 MYH16Q9H6N6 1097 aa10.9□□□□□ -0.66
PTPRK-206ENST00000368215 HDGFL2Q7Z4V5 671 aaPredicted RBP10.89□□□□□ -0.67
PTPRK-206ENST00000368215 KIF21AQ7Z4S6 1674 aa10.89□□□□□ -0.67
PTPRK-206ENST00000368215 BECN1Q14457 450 aa10.89□□□□□ -0.67
PTPRK-206ENST00000368215 SCAPERQ9BY12 1400 aa10.89□□□□□ -0.67
PTPRK-206ENST00000368215 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.88□□□□□ -0.671e-6■■■□□ 16.3
PTPRK-206ENST00000368215 IPO9Q96P70 1041 aaKnown RBP10.88□□□□□ -0.67
PTPRK-206ENST00000368215 MINK1Q8N4C8 1332 aaPredicted RBP10.88□□□□□ -0.67
PTPRK-206ENST00000368215 CENPJQ9HC77 1338 aaPredicted RBP10.87□□□□□ -0.67
PTPRK-206ENST00000368215 CCDC141Q6ZP82 1450 aa10.87□□□□□ -0.67
PTPRK-206ENST00000368215 PDE4AP27815 886 aa10.87□□□□□ -0.67
PTPRK-206ENST00000368215 NUTM2FA1L443 756 aa10.86□□□□□ -0.67
PTPRK-206ENST00000368215 DEKP35659 375 aaKnown RBP10.86□□□□□ -0.67
PTPRK-206ENST00000368215 ADAMTS12P58397 1594 aa10.86□□□□□ -0.67
PTPRK-206ENST00000368215 VGFO15240 615 aaPredicted RBP10.86□□□□□ -0.67
PTPRK-206ENST00000368215 PPP2R1AP30153 589 aa10.86□□□□□ -0.67
PTPRK-206ENST00000368215 RAPGEF6Q8TEU7 1601 aa10.86□□□□□ -0.67
PTPRK-206ENST00000368215 WDR62O43379 1518 aa10.85□□□□□ -0.67
PTPRK-206ENST00000368215 TERF2IPQ9NYB0 399 aa10.85□□□□□ -0.67
PTPRK-206ENST00000368215 ATP10BO94823 1461 aa10.85□□□□□ -0.67
PTPRK-206ENST00000368215 TCOF1Q13428 1488 aaKnown RBP10.85□□□□□ -0.67
PTPRK-206ENST00000368215 KIF14Q15058 1648 aa10.85□□□□□ -0.67
PTPRK-206ENST00000368215 FANCIQ9NVI1 1328 aa10.84□□□□□ -0.67
PTPRK-206ENST00000368215 ITPRIPQ8IWB1 547 aa10.84□□□□□ -0.67
PTPRK-206ENST00000368215 SMC4Q9NTJ3 1288 aa10.84□□□□□ -0.67
PTPRK-206ENST00000368215 COG6Q9Y2V7 657 aa10.84□□□□□ -0.67
PTPRK-206ENST00000368215 MAGI3Q5TCQ9 1506 aa10.84□□□□□ -0.67
PTPRK-206ENST00000368215 SPRYD3Q8NCJ5 442 aa10.84□□□□□ -0.67
PTPRK-206ENST00000368215 ABCA5Q8WWZ7 1642 aa10.84□□□□□ -0.67
PTPRK-206ENST00000368215 CGNL1Q0VF96 1302 aa10.84□□□□□ -0.67
PTPRK-206ENST00000368215 EVC2Q86UK5 1308 aa10.83□□□□□ -0.68
PTPRK-206ENST00000368215 PNNQ9H307 717 aaKnown RBP10.83□□□□□ -0.68
PTPRK-206ENST00000368215 ERBINQ96RT1 1412 aa10.83□□□□□ -0.68
PTPRK-206ENST00000368215 E9PSI1 815 aa10.83□□□□□ -0.68
PTPRK-206ENST00000368215 MS4A1P11836 297 aa10.83□□□□□ -0.68
PTPRK-206ENST00000368215 SLC4A3P48751 1232 aa10.83□□□□□ -0.68
PTPRK-206ENST00000368215 CABP2Q9NPB3 220 aa10.83□□□□□ -0.68
PTPRK-206ENST00000368215 KIAA0556O60303 1618 aa10.83□□□□□ -0.68
PTPRK-206ENST00000368215 PLEKHH2Q8IVE3 1493 aa10.83□□□□□ -0.68
PTPRK-206ENST00000368215 SLC12A5Q9H2X9 1139 aa10.82□□□□□ -0.68
PTPRK-206ENST00000368215 DISP1Q96F81 1524 aa10.82□□□□□ -0.68
PTPRK-206ENST00000368215 LMOD2Q6P5Q4 547 aa10.82□□□□□ -0.68
PTPRK-206ENST00000368215 RAPGEF3O95398 923 aa10.81□□□□□ -0.68
PTPRK-206ENST00000368215 STAC3Q96MF2 364 aa10.81□□□□□ -0.68
PTPRK-206ENST00000368215 SMG6Q86US8 1419 aaKnown RBP10.81□□□□□ -0.68
PTPRK-206ENST00000368215 SAMD9Q5K651 1589 aa10.81□□□□□ -0.68
PTPRK-206ENST00000368215 GGNBP2Q9H3C7 697 aa10.81□□□□□ -0.68
PTPRK-206ENST00000368215 RTN4Q9NQC3 1192 aaKnown RBP10.81□□□□□ -0.68
PTPRK-206ENST00000368215 ELL2O00472 640 aaPredicted RBP10.8□□□□□ -0.68
PTPRK-206ENST00000368215 HDGFP51858 240 aaKnown RBP10.8□□□□□ -0.68
PTPRK-206ENST00000368215 CENPQQ7L2Z9 268 aaPredicted RBP10.8□□□□□ -0.68
PTPRK-206ENST00000368215 MTHFSP49914 203 aa10.79□□□□□ -0.68
PTPRK-206ENST00000368215 SLKQ9H2G2 1235 aaPredicted RBP10.79□□□□□ -0.68
PTPRK-206ENST00000368215 RWDD1Q9H446 243 aaPredicted RBP10.79□□□□□ -0.68
PTPRK-206ENST00000368215 APBB1O00213 710 aa10.79□□□□□ -0.68
PTPRK-206ENST00000368215 FAM69CQ0P6D2 419 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms