RNA–Protein interactions for RNA: ENST00000367379.5

PTPRC-204, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 5

Gene PTPRC, Length 517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-204ENST00000367379 MRPL50Q8N5N7 158 aaKnown RBP13.97□□□□□ -0.17
PTPRC-204ENST00000367379 PDIA6Q15084 440 aa13.96□□□□□ -0.17
PTPRC-204ENST00000367379 CFAP44Q96MT7 982 aa13.96□□□□□ -0.17
PTPRC-204ENST00000367379 NBPF3Q9H094 633 aa13.96□□□□□ -0.17
PTPRC-204ENST00000367379 PROX2Q3B8N5 592 aa13.95□□□□□ -0.18
PTPRC-204ENST00000367379 THSD4Q6ZMP0 1018 aa13.95□□□□□ -0.18
PTPRC-204ENST00000367379 RABGEF1Q9UJ41 708 aa13.95□□□□□ -0.18
PTPRC-204ENST00000367379 C6orf132Q5T0Z8 1188 aa13.94□□□□□ -0.18
PTPRC-204ENST00000367379 DDX12PQ92771 950 aa13.92□□□□□ -0.18
PTPRC-204ENST00000367379 WNT2BQ93097 391 aa13.92□□□□□ -0.18
PTPRC-204ENST00000367379 ARIH1Q9Y4X5 557 aaPredicted RBP13.92□□□□□ -0.18
PTPRC-204ENST00000367379 GOLGA8CPA6NN73 597 aa13.91□□□□□ -0.18
PTPRC-204ENST00000367379 SPDYE16A6NNV3 312 aaPredicted RBP13.91□□□□□ -0.18
PTPRC-204ENST00000367379 PTPN5P54829 565 aa13.91□□□□□ -0.18
PTPRC-204ENST00000367379 E2F4Q16254 413 aa13.91□□□□□ -0.18
PTPRC-204ENST00000367379 ONECUT3O60422 494 aaPredicted RBP13.89□□□□□ -0.19
PTPRC-204ENST00000367379 RBM33Q96EV2 1170 aaKnown RBP13.86□□□□□ -0.19
PTPRC-204ENST00000367379 EN1Q05925 392 aaPredicted RBP13.85□□□□□ -0.19
PTPRC-204ENST00000367379 LAPTM4BQ86VI4 370 aa13.85□□□□□ -0.19
PTPRC-204ENST00000367379 WDR70Q9NW82 654 aa13.85□□□□□ -0.19
PTPRC-204ENST00000367379 KIAA1468Q9P260 1216 aa13.85□□□□□ -0.19
PTPRC-204ENST00000367379 NBR1Q14596 966 aa13.84□□□□□ -0.19
PTPRC-204ENST00000367379 TRIM6-TRIM34B2RNG4 842 aa13.83□□□□□ -0.2
PTPRC-204ENST00000367379 TSR1Q2NL82 804 aaKnown RBP13.8□□□□□ -0.2
PTPRC-204ENST00000367379 IFFO2Q5TF58 517 aa13.8□□□□□ -0.2
PTPRC-204ENST00000367379 ANKK1Q8NFD2 765 aa13.8□□□□□ -0.2
PTPRC-204ENST00000367379 MAP3K7O43318 606 aa13.78□□□□□ -0.2
PTPRC-204ENST00000367379 PRIM1P49642 420 aaKnown RBP13.77□□□□□ -0.21
PTPRC-204ENST00000367379 ZFRQ96KR1 1074 aaKnown RBP13.77□□□□□ -0.21
PTPRC-204ENST00000367379 SEPT9Q9UHD8 586 aaPredicted RBP13.76□□□□□ -0.21
PTPRC-204ENST00000367379 SOWAHBA6NEL2 793 aa13.75□□□□□ -0.21
PTPRC-204ENST00000367379 BCAMP50895 628 aa13.74□□□□□ -0.21
PTPRC-204ENST00000367379 TSKSQ9UJT2 592 aa13.74□□□□□ -0.21
PTPRC-204ENST00000367379 FAM98CQ17RN3 349 aaKnown RBP13.73□□□□□ -0.21
PTPRC-204ENST00000367379 GRXCR2A6NFK2 248 aa13.72□□□□□ -0.21
PTPRC-204ENST00000367379 OSBPP22059 807 aa13.7□□□□□ -0.22
PTPRC-204ENST00000367379 PACS2Q86VP3 889 aa13.69□□□□□ -0.22
PTPRC-204ENST00000367379 CERKQ8TCT0 537 aa13.69□□□□□ -0.22
PTPRC-204ENST00000367379 TSHZ2Q9NRE2 1034 aa13.69□□□□□ -0.22
PTPRC-204ENST00000367379 PRSS12P56730 875 aa13.68□□□□□ -0.22
PTPRC-204ENST00000367379 CDCA7LQ96GN5 454 aa13.68□□□□□ -0.22
PTPRC-204ENST00000367379 FAM198AQ9UFP1 575 aa13.67□□□□□ -0.22
PTPRC-204ENST00000367379 NYAP1Q6ZVC0 841 aa13.66□□□□□ -0.22
PTPRC-204ENST00000367379 ITGBL1O95965 494 aaPredicted RBP13.65□□□□□ -0.22
PTPRC-204ENST00000367379 WBP1LQ9NX94 342 aa13.65□□□□□ -0.22
PTPRC-204ENST00000367379 A0A0G2JS52 829 aa13.63□□□□□ -0.23
PTPRC-204ENST00000367379 CDHR5Q9HBB8 845 aa13.63□□□□□ -0.23
PTPRC-204ENST00000367379 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.63□□□□□ -0.23
PTPRC-204ENST00000367379 LRCH3Q96II8 777 aa13.62□□□□□ -0.23
PTPRC-204ENST00000367379 C3orf80F5H4A9 247 aa13.61□□□□□ -0.23
PTPRC-204ENST00000367379 RGS20O76081 388 aa13.61□□□□□ -0.23
PTPRC-204ENST00000367379 TSR3Q9UJK0 312 aaKnown RBP13.61□□□□□ -0.23
PTPRC-204ENST00000367379 ARHGEF1Q92888 912 aaKnown RBP13.6□□□□□ -0.23
PTPRC-204ENST00000367379 RBM27Q9P2N5 1060 aaKnown RBP13.6□□□□□ -0.23
PTPRC-204ENST00000367379 HPS5Q9UPZ3 1129 aa13.59□□□□□ -0.23
PTPRC-204ENST00000367379 SMAPO00193 183 aa13.58□□□□□ -0.24
PTPRC-204ENST00000367379 KCNV2Q8TDN2 545 aa13.58□□□□□ -0.24
PTPRC-204ENST00000367379 TATDN2Q93075 761 aa13.58□□□□□ -0.24
PTPRC-204ENST00000367379 NPDC1Q9NQX5 325 aaPredicted RBP13.57□□□□□ -0.24
PTPRC-204ENST00000367379 NBPF26B4DH59 902 aa13.56□□□□□ -0.24
PTPRC-204ENST00000367379 TTC13Q8NBP0 860 aa13.56□□□□□ -0.24
PTPRC-204ENST00000367379 PNMA3Q9UL41 463 aa13.54□□□□□ -0.24
PTPRC-204ENST00000367379 SAMD7Q7Z3H4 446 aa13.53□□□□□ -0.24
PTPRC-204ENST00000367379 MLLT3P42568 568 aaPredicted RBP13.52□□□□□ -0.25
PTPRC-204ENST00000367379 NUDT18Q6ZVK8 323 aa13.51□□□□□ -0.25
PTPRC-204ENST00000367379 KCNC4Q03721 635 aa13.5□□□□□ -0.25
PTPRC-204ENST00000367379 PPP4CP60510 307 aa13.49□□□□□ -0.25
PTPRC-204ENST00000367379 PADI6Q6TGC4 694 aa13.48□□□□□ -0.25
PTPRC-204ENST00000367379 P3H3Q8IVL6 736 aa13.42□□□□□ -0.26
PTPRC-204ENST00000367379 TJAP1Q5JTD0 557 aa13.41□□□□□ -0.26
PTPRC-204ENST00000367379 PTGDRQ13258 359 aa13.4□□□□□ -0.26
PTPRC-204ENST00000367379 EYA1Q99502 592 aa13.4□□□□□ -0.26
PTPRC-204ENST00000367379 HDGFP51858 240 aaKnown RBP13.39□□□□□ -0.27
PTPRC-204ENST00000367379 SWT1Q5T5J6 900 aaKnown RBP13.37□□□□□ -0.27
PTPRC-204ENST00000367379 PLCB2Q00722 1185 aa13.36□□□□□ -0.27
PTPRC-204ENST00000367379 APLP1P51693 650 aa13.35□□□□□ -0.27
PTPRC-204ENST00000367379 MTRQ99707 1265 aa13.35□□□□□ -0.27
PTPRC-204ENST00000367379 IRX2Q9BZI1 471 aaPredicted RBP13.35□□□□□ -0.27
PTPRC-204ENST00000367379 SEMA3EO15041 775 aa13.33□□□□□ -0.28
PTPRC-204ENST00000367379 RNF40O75150 1001 aa13.33□□□□□ -0.28
PTPRC-204ENST00000367379 SLF2Q8IX21 1173 aa13.33□□□□□ -0.28
PTPRC-204ENST00000367379 NECTIN2Q92692 538 aa13.33□□□□□ -0.28
PTPRC-204ENST00000367379 IL21Q9HBE4 155 aa13.33□□□□□ -0.28
PTPRC-204ENST00000367379 ADGRG1Q9Y653 693 aa13.3□□□□□ -0.28
PTPRC-204ENST00000367379 NUTM2FA1L443 756 aa13.29□□□□□ -0.28
PTPRC-204ENST00000367379 ZNF516Q92618 1163 aa13.28□□□□□ -0.28
PTPRC-204ENST00000367379 DNAJB2P25686 324 aa13.26□□□□□ -0.29
PTPRC-204ENST00000367379 RBM46Q8TBY0 533 aaKnown RBP13.26□□□□□ -0.29
PTPRC-204ENST00000367379 FCHSD2O94868 740 aa13.25□□□□□ -0.29
PTPRC-204ENST00000367379 TMEM134Q9H6X4 195 aa13.25□□□□□ -0.29
PTPRC-204ENST00000367379 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
PTPRC-204ENST00000367379 SLC4A3P48751 1232 aa13.24□□□□□ -0.29
PTPRC-204ENST00000367379 PPP1R18Q6NYC8 613 aa13.22□□□□□ -0.29
PTPRC-204ENST00000367379 FAM161AQ3B820 660 aa13.21□□□□□ -0.29
PTPRC-204ENST00000367379 RCCD1A6NED2 376 aa13.2□□□□□ -0.3
PTPRC-204ENST00000367379 PRR14Q9BWN1 585 aa13.2□□□□□ -0.3
PTPRC-204ENST00000367379 NKX2-3Q8TAU0 364 aa13.19□□□□□ -0.3
PTPRC-204ENST00000367379 COPS2P61201 443 aa13.18□□□□□ -0.3
PTPRC-204ENST00000367379 HIC1Q14526 733 aa13.17□□□□□ -0.3
PTPRC-204ENST00000367379 RBM26Q5T8P6 1007 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms