RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 CUL7Q14999 1698 aa15□□□□□ -0.01
PRKN-206ENST00000366898 SNAPC4Q5SXM2 1469 aa15□□□□□ -0.01
PRKN-206ENST00000366898 KIF7Q2M1P5 1343 aa14.99□□□□□ -0.01
PRKN-206ENST00000366898 EHBP1L1Q8N3D4 1523 aa14.99□□□□□ -0.01
PRKN-206ENST00000366898 SUPT6HQ7KZ85 1726 aaKnown RBP14.97□□□□□ -0.01
PRKN-206ENST00000366898 FRAT2O75474 233 aaPredicted RBP14.96□□□□□ -0.01
PRKN-206ENST00000366898 CCDC7Q96M83 1385 aa14.96□□□□□ -0.01
PRKN-206ENST00000366898 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.96□□□□□ -0.01
PRKN-206ENST00000366898 USP47Q96K76 1375 aa14.95□□□□□ -0.02
PRKN-206ENST00000366898 ROCK2O75116 1388 aaKnown RBP14.95□□□□□ -0.02
PRKN-206ENST00000366898 PTPN23Q9H3S7 1636 aa14.95□□□□□ -0.02
PRKN-206ENST00000366898 IQGAP2Q13576 1575 aa14.94□□□□□ -0.02
PRKN-206ENST00000366898 PTPRGP23470 1445 aa14.94□□□□□ -0.02
PRKN-206ENST00000366898 WDR62O43379 1518 aa14.94□□□□□ -0.02
PRKN-206ENST00000366898 PLB1Q6P1J6 1458 aa14.94□□□□□ -0.02
PRKN-206ENST00000366898 WDR43Q15061 677 aaKnown RBP eCLIP14.93□□□□□ -0.023e-8■■■■■ 70.1
PRKN-206ENST00000366898 ZNF771Q7L3S4 317 aaPredicted RBP14.93□□□□□ -0.02
PRKN-206ENST00000366898 BBXQ8WY36 941 aaPredicted RBP14.92□□□□□ -0.02
PRKN-206ENST00000366898 CHAF1AQ13111 956 aaPredicted RBP14.92□□□□□ -0.02
PRKN-206ENST00000366898 DAPK1P53355 1430 aa14.92□□□□□ -0.02
PRKN-206ENST00000366898 THOC2Q8NI27 1593 aaKnown RBP14.91□□□□□ -0.02
PRKN-206ENST00000366898 HSP90AB1P08238 724 aaKnown RBP14.91□□□□□ -0.02
PRKN-206ENST00000366898 HECW1Q76N89 1606 aa14.9□□□□□ -0.02
PRKN-206ENST00000366898 ANKRD50Q9ULJ7 1429 aa14.9□□□□□ -0.02
PRKN-206ENST00000366898 ZHX1Q9UKY1 873 aaPredicted RBP14.89□□□□□ -0.03
PRKN-206ENST00000366898 R3HCC1Q9Y3T6 440 aaKnown RBP14.89□□□□□ -0.03
PRKN-206ENST00000366898 MIA2Q96PC5 1412 aa14.88□□□□□ -0.03
PRKN-206ENST00000366898 PRDM10Q9NQV6 1147 aa14.88□□□□□ -0.03
PRKN-206ENST00000366898 KIF15Q9NS87 1388 aa14.88□□□□□ -0.03
PRKN-206ENST00000366898 ABCC5O15440 1437 aa14.88□□□□□ -0.03
PRKN-206ENST00000366898 APPP05067 770 aa14.88□□□□□ -0.03
PRKN-206ENST00000366898 KNSTRNQ9Y448 316 aa14.88□□□□□ -0.03
PRKN-206ENST00000366898 CNTLNQ9NXG0 1405 aa14.88□□□□□ -0.03
PRKN-206ENST00000366898 CTTNBP2Q8WZ74 1663 aa14.87□□□□□ -0.03
PRKN-206ENST00000366898 CFAP43Q8NDM7 1665 aa14.87□□□□□ -0.03
PRKN-206ENST00000366898 KIAA0586Q9BVV6 1533 aa14.87□□□□□ -0.03
PRKN-206ENST00000366898 TROQ12816 1431 aaPredicted RBP14.86□□□□□ -0.03
PRKN-206ENST00000366898 HSCBQ8IWL3 235 aa14.86□□□□□ -0.03
PRKN-206ENST00000366898 PDIA4P13667 645 aaKnown RBP14.85□□□□□ -0.03
PRKN-206ENST00000366898 NEUROD2Q15784 382 aa14.85□□□□□ -0.03
PRKN-206ENST00000366898 NBPF1Q3BBV0 1214 aa14.85□□□□□ -0.03
PRKN-206ENST00000366898 EXOC6Q8TAG9 804 aa14.85□□□□□ -0.03
PRKN-206ENST00000366898 RCAN3Q9UKA8 241 aa14.85□□□□□ -0.03
PRKN-206ENST00000366898 EFCAB2Q5VUJ9 269 aa14.84□□□□□ -0.03
PRKN-206ENST00000366898 KIAA2012Q0VF49 1180 aa14.84□□□□□ -0.03
PRKN-206ENST00000366898 ANKRD30BQ9BXX2 1392 aa14.84□□□□□ -0.03
PRKN-206ENST00000366898 TMF1P82094 1093 aa14.84□□□□□ -0.03
PRKN-206ENST00000366898 NUDCQ9Y266 331 aa14.83□□□□□ -0.03
PRKN-206ENST00000366898 KIF3BO15066 747 aa14.82□□□□□ -0.04
PRKN-206ENST00000366898 UGGT2Q9NYU1 1516 aa14.82□□□□□ -0.04
PRKN-206ENST00000366898 GRIN2AQ12879 1464 aa14.82□□□□□ -0.04
PRKN-206ENST00000366898 GGT6Q6P531 493 aa14.82□□□□□ -0.04
PRKN-206ENST00000366898 MAGI3Q5TCQ9 1506 aa14.81□□□□□ -0.04
PRKN-206ENST00000366898 CCDC144AA2RUR9 1427 aa14.81□□□□□ -0.04
PRKN-206ENST00000366898 PLPPR3Q6T4P5 718 aa14.81□□□□□ -0.04
PRKN-206ENST00000366898 TPM2P07951 284 aa14.81□□□□□ -0.04
PRKN-206ENST00000366898 TARBP1Q13395 1621 aaKnown RBP14.81□□□□□ -0.04
PRKN-206ENST00000366898 BCL11BQ9C0K0 894 aaPredicted RBP14.81□□□□□ -0.04
PRKN-206ENST00000366898 ZBED9Q6R2W3 1325 aa14.8□□□□□ -0.04
PRKN-206ENST00000366898 PANK3Q9H999 370 aa14.8□□□□□ -0.04
PRKN-206ENST00000366898 ARHGEF11O15085 1522 aa14.8□□□□□ -0.04
PRKN-206ENST00000366898 SAFB2Q14151 953 aaKnown RBP eCLIP14.8□□□□□ -0.04
PRKN-206ENST00000366898 NUTM2DQ5VT03 806 aaPredicted RBP14.8□□□□□ -0.04
PRKN-206ENST00000366898 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
PRKN-206ENST00000366898 KIAA1211Q6ZU35 1233 aa14.8□□□□□ -0.04
PRKN-206ENST00000366898 PLCD3Q8N3E9 789 aa14.8□□□□□ -0.04
PRKN-206ENST00000366898 GBP4Q96PP9 640 aa14.79□□□□□ -0.04
PRKN-206ENST00000366898 KTN1Q86UP2 1357 aaKnown RBP14.79□□□□□ -0.04
PRKN-206ENST00000366898 AFAP1Q8N556 730 aa14.79□□□□□ -0.04
PRKN-206ENST00000366898 MAP7D2Q96T17 732 aa14.79□□□□□ -0.04
PRKN-206ENST00000366898 ABCA5Q8WWZ7 1642 aa14.78□□□□□ -0.04
PRKN-206ENST00000366898 C9orf84Q5VXU9 1444 aa14.78□□□□□ -0.04
PRKN-206ENST00000366898 SPAG9O60271 1321 aaKnown RBP14.78□□□□□ -0.04
PRKN-206ENST00000366898 KIAA1107Q9UPP5 1409 aa14.77□□□□□ -0.04
PRKN-206ENST00000366898 NUP153P49790 1475 aaKnown RBP14.77□□□□□ -0.04
PRKN-206ENST00000366898 CAMSAP2Q08AD1 1489 aa14.77□□□□□ -0.04
PRKN-206ENST00000366898 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.77□□□□□ -0.04
PRKN-206ENST00000366898 STAG3Q9UJ98 1225 aa14.77□□□□□ -0.04
PRKN-206ENST00000366898 PLIN1O60240 522 aa14.77□□□□□ -0.05
PRKN-206ENST00000366898 AEBP1Q8IUX7 1158 aa14.76□□□□□ -0.05
PRKN-206ENST00000366898 NCOA1Q15788 1441 aa14.76□□□□□ -0.05
PRKN-206ENST00000366898 PTMSP20962 102 aa14.75□□□□□ -0.05
PRKN-206ENST00000366898 RALBP1Q15311 655 aa14.75□□□□□ -0.05
PRKN-206ENST00000366898 ESPNB1AK53 854 aa14.75□□□□□ -0.05
PRKN-206ENST00000366898 NLRP13Q86W25 1043 aa14.74□□□□□ -0.05
PRKN-206ENST00000366898 CCDC146Q8IYE0 955 aa14.74□□□□□ -0.05
PRKN-206ENST00000366898 ROCK1Q13464 1354 aa14.74□□□□□ -0.05
PRKN-206ENST00000366898 PDCL3Q9H2J4 239 aa14.74□□□□□ -0.05
PRKN-206ENST00000366898 POGKQ9P215 609 aa14.74□□□□□ -0.05
PRKN-206ENST00000366898 RSPH4AQ5TD94 716 aa14.74□□□□□ -0.05
PRKN-206ENST00000366898 MYBBP1AQ9BQG0 1328 aaKnown RBP14.73□□□□□ -0.05
PRKN-206ENST00000366898 FAM161AQ3B820 660 aa14.73□□□□□ -0.05
PRKN-206ENST00000366898 AKNAQ7Z591 1439 aa14.73□□□□□ -0.05
PRKN-206ENST00000366898 PAXIP1Q6ZW49 1069 aaPredicted RBP14.72□□□□□ -0.05
PRKN-206ENST00000366898 SYNJ2O15056 1496 aa14.72□□□□□ -0.05
PRKN-206ENST00000366898 RPRD2Q5VT52 1461 aaKnown RBP14.71□□□□□ -0.05
PRKN-206ENST00000366898 CALD1Q05682 793 aaKnown RBP14.71□□□□□ -0.05
PRKN-206ENST00000366898 MAGI1Q96QZ7 1491 aaPredicted RBP14.71□□□□□ -0.05
PRKN-206ENST00000366898 MS4A1P11836 297 aa14.71□□□□□ -0.05
PRKN-206ENST00000366898 MRE11P49959 708 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms