RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 TYW1BQ6NUM6 668 aa6.18□□□□□ -1.42
RNU4-56P-201ENST00000364700 LAPTM4BQ86VI4 370 aa6.18□□□□□ -1.42
RNU4-56P-201ENST00000364700 BBXQ8WY36 941 aaPredicted RBP6.18□□□□□ -1.42
RNU4-56P-201ENST00000364700 PHF14O94880 888 aa6.17□□□□□ -1.42
RNU4-56P-201ENST00000364700 ANKK1Q8NFD2 765 aa6.17□□□□□ -1.42
RNU4-56P-201ENST00000364700 ONECUT3O60422 494 aaPredicted RBP6.16□□□□□ -1.42
RNU4-56P-201ENST00000364700 NYAP1Q6ZVC0 841 aa6.16□□□□□ -1.42
RNU4-56P-201ENST00000364700 ITGBL1O95965 494 aaPredicted RBP6.15□□□□□ -1.42
RNU4-56P-201ENST00000364700 COL9A1P20849 921 aa6.15□□□□□ -1.42
RNU4-56P-201ENST00000364700 CAMK2BQ13554 666 aa6.15□□□□□ -1.42
RNU4-56P-201ENST00000364700 PROX2Q3B8N5 592 aa6.15□□□□□ -1.42
RNU4-56P-201ENST00000364700 EPAS1Q99814 870 aa6.15□□□□□ -1.42
RNU4-56P-201ENST00000364700 IRX2Q9BZI1 471 aaPredicted RBP6.14□□□□□ -1.43
RNU4-56P-201ENST00000364700 SOWAHBA6NEL2 793 aa6.13□□□□□ -1.43
RNU4-56P-201ENST00000364700 DCAF8L2P0C7V8 631 aa6.13□□□□□ -1.43
RNU4-56P-201ENST00000364700 CADPS2Q86UW7 1296 aa6.13□□□□□ -1.43
RNU4-56P-201ENST00000364700 C6orf132Q5T0Z8 1188 aa6.12□□□□□ -1.43
RNU4-56P-201ENST00000364700 KIAA1468Q9P260 1216 aa6.12□□□□□ -1.43
RNU4-56P-201ENST00000364700 ZFRQ96KR1 1074 aaKnown RBP6.11□□□□□ -1.43
RNU4-56P-201ENST00000364700 BCAMP50895 628 aa6.1□□□□□ -1.43
RNU4-56P-201ENST00000364700 TRIM6-TRIM34B2RNG4 842 aa6.09□□□□□ -1.43
RNU4-56P-201ENST00000364700 FAM98CQ17RN3 349 aaKnown RBP6.09□□□□□ -1.43
RNU4-56P-201ENST00000364700 DPYSL4O14531 572 aa6.08□□□□□ -1.44
RNU4-56P-201ENST00000364700 KCNC4Q03721 635 aa6.08□□□□□ -1.44
RNU4-56P-201ENST00000364700 WBP1LQ9NX94 342 aa6.08□□□□□ -1.44
RNU4-56P-201ENST00000364700 KDM2AQ9Y2K7 1162 aa6.08□□□□□ -1.44
RNU4-56P-201ENST00000364700 SEPT9Q9UHD8 586 aaPredicted RBP6.07□□□□□ -1.44
RNU4-56P-201ENST00000364700 PAXIP1Q6ZW49 1069 aaPredicted RBP6.06□□□□□ -1.44
RNU4-56P-201ENST00000364700 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.06□□□□□ -1.44
RNU4-56P-201ENST00000364700 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.06□□□□□ -1.44
RNU4-56P-201ENST00000364700 TSR3Q9UJK0 312 aaKnown RBP6.06□□□□□ -1.44
RNU4-56P-201ENST00000364700 EN1Q05925 392 aaPredicted RBP6.05□□□□□ -1.44
RNU4-56P-201ENST00000364700 PACS2Q86VP3 889 aa6.05□□□□□ -1.44
RNU4-56P-201ENST00000364700 DDX12PQ92771 950 aa6.05□□□□□ -1.44
RNU4-56P-201ENST00000364700 RBM33Q96EV2 1170 aaKnown RBP6.05□□□□□ -1.44
RNU4-56P-201ENST00000364700 LRCH3Q96II8 777 aa6.05□□□□□ -1.44
RNU4-56P-201ENST00000364700 SPDYE16A6NNV3 312 aaPredicted RBP6.04□□□□□ -1.44
RNU4-56P-201ENST00000364700 HAP1P54257 671 aaPredicted RBP6.04□□□□□ -1.44
RNU4-56P-201ENST00000364700 PDIA6Q15084 440 aa6.04□□□□□ -1.44
RNU4-56P-201ENST00000364700 VSIG10Q8N0Z9 540 aa6.04□□□□□ -1.44
RNU4-56P-201ENST00000364700 SPRYD3Q8NCJ5 442 aa6.04□□□□□ -1.44
RNU4-56P-201ENST00000364700 TSHZ2Q9NRE2 1034 aa6.04□□□□□ -1.44
RNU4-56P-201ENST00000364700 HPS5Q9UPZ3 1129 aa6.04□□□□□ -1.44
RNU4-56P-201ENST00000364700 MAP3K7O43318 606 aa6.02□□□□□ -1.45
RNU4-56P-201ENST00000364700 NBR1Q14596 966 aa6.02□□□□□ -1.45
RNU4-56P-201ENST00000364700 CFAP44Q96MT7 982 aa6.02□□□□□ -1.45
RNU4-56P-201ENST00000364700 TSKSQ9UJT2 592 aa6.02□□□□□ -1.45
RNU4-56P-201ENST00000364700 LAPTM4AQ15012 233 aa6.01□□□□□ -1.45
RNU4-56P-201ENST00000364700 CERKQ8TCT0 537 aa6.01□□□□□ -1.45
RNU4-56P-201ENST00000364700 TSR1Q2NL82 804 aaKnown RBP6□□□□□ -1.45
RNU4-56P-201ENST00000364700 ARIH1Q9Y4X5 557 aaPredicted RBP6□□□□□ -1.45
RNU4-56P-201ENST00000364700 PRSS12P56730 875 aa5.99□□□□□ -1.45
RNU4-56P-201ENST00000364700 PPP4CP60510 307 aa5.99□□□□□ -1.45
RNU4-56P-201ENST00000364700 Q6ZNB5 142 aa5.99□□□□□ -1.45
RNU4-56P-201ENST00000364700 CDCA7LQ96GN5 454 aa5.99□□□□□ -1.45
RNU4-56P-201ENST00000364700 NBPF26B4DH59 902 aa5.97□□□□□ -1.45
RNU4-56P-201ENST00000364700 TJAP1Q5JTD0 557 aa5.97□□□□□ -1.45
RNU4-56P-201ENST00000364700 SAMD7Q7Z3H4 446 aa5.97□□□□□ -1.45
RNU4-56P-201ENST00000364700 E2F4Q16254 413 aa5.96□□□□□ -1.46
RNU4-56P-201ENST00000364700 TATDN2Q93075 761 aa5.96□□□□□ -1.46
RNU4-56P-201ENST00000364700 RBM27Q9P2N5 1060 aaKnown RBP5.96□□□□□ -1.46
RNU4-56P-201ENST00000364700 IL21Q9HBE4 155 aa5.95□□□□□ -1.46
RNU4-56P-201ENST00000364700 FAM198AQ9UFP1 575 aa5.95□□□□□ -1.46
RNU4-56P-201ENST00000364700 HDGFP51858 240 aaKnown RBP5.94□□□□□ -1.46
RNU4-56P-201ENST00000364700 NECTIN2Q92692 538 aa5.94□□□□□ -1.46
RNU4-56P-201ENST00000364700 SMAPO00193 183 aa5.93□□□□□ -1.46
RNU4-56P-201ENST00000364700 PRIM1P49642 420 aaKnown RBP5.93□□□□□ -1.46
RNU4-56P-201ENST00000364700 MTRQ99707 1265 aa5.93□□□□□ -1.46
RNU4-56P-201ENST00000364700 PNMA3Q9UL41 463 aa5.93□□□□□ -1.46
RNU4-56P-201ENST00000364700 V9GY48 417 aaPredicted RBP5.93□□□□□ -1.46
RNU4-56P-201ENST00000364700 GRXCR2A6NFK2 248 aa5.92□□□□□ -1.46
RNU4-56P-201ENST00000364700 GFRA3O60609 400 aa5.92□□□□□ -1.46
RNU4-56P-201ENST00000364700 OSBPP22059 807 aa5.92□□□□□ -1.46
RNU4-56P-201ENST00000364700 WDR70Q9NW82 654 aa5.92□□□□□ -1.46
RNU4-56P-201ENST00000364700 C3orf80F5H4A9 247 aa5.91□□□□□ -1.46
RNU4-56P-201ENST00000364700 PPP1R18Q6NYC8 613 aa5.91□□□□□ -1.46
RNU4-56P-201ENST00000364700 TTC13Q8NBP0 860 aa5.91□□□□□ -1.46
RNU4-56P-201ENST00000364700 PRKD2Q9BZL6 878 aa5.91□□□□□ -1.46
RNU4-56P-201ENST00000364700 NRG2O14511 850 aaPredicted RBP5.9□□□□□ -1.46
RNU4-56P-201ENST00000364700 TRAF7Q6Q0C0 670 aa5.9□□□□□ -1.46
RNU4-56P-201ENST00000364700 NUDT18Q6ZVK8 323 aa5.9□□□□□ -1.46
RNU4-56P-201ENST00000364700 LCE2BO14633 110 aa5.89□□□□□ -1.47
RNU4-56P-201ENST00000364700 APLP1P51693 650 aa5.89□□□□□ -1.47
RNU4-56P-201ENST00000364700 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.89□□□□□ -1.47
RNU4-56P-201ENST00000364700 GGCXP38435 758 aa5.88□□□□□ -1.47
RNU4-56P-201ENST00000364700 SLF2Q8IX21 1173 aa5.88□□□□□ -1.47
RNU4-56P-201ENST00000364700 ZNF516Q92618 1163 aa5.88□□□□□ -1.47
RNU4-56P-201ENST00000364700 CDHR5Q9HBB8 845 aa5.88□□□□□ -1.47
RNU4-56P-201ENST00000364700 RNF40O75150 1001 aa5.87□□□□□ -1.47
RNU4-56P-201ENST00000364700 SLC4A3P48751 1232 aa5.87□□□□□ -1.47
RNU4-56P-201ENST00000364700 TMUB1Q9BVT8 246 aa5.87□□□□□ -1.47
RNU4-56P-201ENST00000364700 NPDC1Q9NQX5 325 aaPredicted RBP5.87□□□□□ -1.47
RNU4-56P-201ENST00000364700 SWT1Q5T5J6 900 aaKnown RBP5.86□□□□□ -1.47
RNU4-56P-201ENST00000364700 BCANQ96GW7 911 aa5.86□□□□□ -1.47
RNU4-56P-201ENST00000364700 PRR14Q9BWN1 585 aa5.86□□□□□ -1.47
RNU4-56P-201ENST00000364700 PADI6Q6TGC4 694 aa5.85□□□□□ -1.47
RNU4-56P-201ENST00000364700 NKX2-3Q8TAU0 364 aa5.84□□□□□ -1.47
RNU4-56P-201ENST00000364700 EYA1Q99502 592 aa5.84□□□□□ -1.47
RNU4-56P-201ENST00000364700 PDZRN3Q9UPQ7 1066 aa5.84□□□□□ -1.47
RNU4-56P-201ENST00000364700 ZPR1O75312 459 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms